Publications by authors named "Marcel Martin"

32Publications

Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants.

F1000Res 2020 29;9:63. Epub 2020 Jan 29.

Department of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Husargatan 3, Uppsala, 752 37, Sweden.

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http://dx.doi.org/10.12688/f1000research.16665.2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7111497.2PMC
January 2020

Atropos: specific, sensitive, and speedy trimming of sequencing reads.

PeerJ 2017 30;5:e3720. Epub 2017 Aug 30.

National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.

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http://dx.doi.org/10.7717/peerj.3720DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5581536PMC
August 2017

Read-based phasing of related individuals.

Bioinformatics 2016 06;32(12):i234-i242

Center for Bioinformatics, Saarland University, Saarbrücken, Germany Max Planck Institute for Informatics, Saarbrücken, Germany.

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http://dx.doi.org/10.1093/bioinformatics/btw276DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4908360PMC
June 2016

Spatial abilities of medical graduates and choice of residency programs.

Anat Sci Educ 2015 Mar-Apr;8(2):111-9. Epub 2014 Jun 20.

Department of Emergency Medicine, Centre hospitalier universitaire de Sherbrooke, Sherbrooke, Quebec, Canada; Department of Surgery, University of Sherbrooke, Sherbrooke, Quebec, Canada.

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http://dx.doi.org/10.1002/ase.1453DOI Listing
November 2015

Discovering motifs that induce sequencing errors.

BMC Bioinformatics 2013 10;14 Suppl 5:S1. Epub 2013 Apr 10.

Life Sciences Group, Centrum Wiskunde & Informatica, Amsterdam, Netherlands.

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http://dx.doi.org/10.1186/1471-2105-14-S5-S1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3622629PMC
December 2013

Sex differences in spatial abilities of medical graduates entering residency programs.

Anat Sci Educ 2013 Nov-Dec;6(6):368-75. Epub 2013 Apr 2.

Department of Emergency Medicine, Centre hospitalier universitaire de Sherbrooke, Sherbrooke, Quebec, Canada; Department of Surgery, University of Sherbrooke, Sherbrooke, Quebec, Canada.

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http://dx.doi.org/10.1002/ase.1360DOI Listing
June 2014

Identifying transcriptional miRNA biomarkers by integrating high-throughput sequencing and real-time PCR data.

Methods 2013 Jan 23;59(1):154-63. Epub 2012 Oct 23.

Bioinformatics, Computer Science XI, TU Dortmund, Germany; Collaborative Research Center (SFB) 876, TU Dortmund, Germany.

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http://dx.doi.org/10.1016/j.ymeth.2012.10.005DOI Listing
January 2013

The SEQanswers wiki: a wiki database of tools for high-throughput sequencing analysis.

Nucleic Acids Res 2012 Jan 15;40(Database issue):D1313-7. Epub 2011 Nov 15.

School of Life Sciences, The Chinese University of Hong Kong, Shatin, NT, Hong Kong SAR.

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http://dx.doi.org/10.1093/nar/gkr1058DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245082PMC
January 2012

Spatial abilities in an elective course of applied anatomy after a problem-based learning curriculum.

Anat Sci Educ 2009 May-Jun;2(3):107-12

Department of Emergency Medicine, Centre hospitalier universitaire de Sherbrooke, Quebec, Canada.

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http://dx.doi.org/10.1002/ase.84DOI Listing
September 2009

Laceration of the posteromedial papillary muscle of mitral valve with mitral regurgitation as a result of stab wound.

J Trauma 2008 Oct;65(4):927-8

Section of Cardiology, Centre Hospitalier Universitaire de Sherbrooke, Sherbrooke, Quebec, Canada.

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http://dx.doi.org/10.1097/TA.0b013e3181888fc2DOI Listing
October 2008

DECOMP--from interpreting Mass Spectrometry peaks to solving the Money Changing Problem.

Bioinformatics 2008 Feb 2;24(4):591-3. Epub 2008 Jan 2.

Lehrstuhl Bioinformatik, Friedrich-Schiller-Universität Jena, Ernst-Abbe-Platz 2, 07743 Jena, Germany.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btm631DOI Listing
February 2008

Exact and heuristic algorithms for weighted cluster editing.

Comput Syst Bioinformatics Conf 2007 ;6:391-401

Computational Methods for Emerging Technologies group, Genome Informatics, Technische Fakultät, Bielefeld University, D-33594 Bielefeld, Germany.

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December 2007

Cognitive skills analysis, kinesiology, and mental imagery in the acquisition of surgical skills.

J Otolaryngol 2005 Oct;34(5):328-32

Division of Otolaryngology, University of Sherbrooke, Sherbrooke, Québec.

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http://dx.doi.org/10.2310/7070.2005.34506DOI Listing
October 2005

Preinjury warfarin use among elderly patients with closed head injuries in a trauma center.

J Trauma 2004 Apr;56(4):802-7

Choc-Trauma Montérégie, Hôpital Charles-LeMoyne, Greenfield Park, Quebec, Canada.

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http://dx.doi.org/10.1097/01.ta.0000066183.02177.afDOI Listing
April 2004

Training fourth-year medical students in critical invasive skills improves subsequent patient safety.

Am Surg 2003 May;69(5):437-40

Centre hospitalier universitaire de Sherbrooke, Fleurimont, Quebec, Canada.

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May 2003