Publications by authors named "Marc Pybus"

23Publications

Novel homozygous OSGEP gene pathogenic variants in two unrelated patients with Galloway-Mowat syndrome: case report and review of the literature.

BMC Nephrol 2019 04 11;20(1):126. Epub 2019 Apr 11.

Molecular Biology Laboratory, Fundació Puigvert, Instituto de Investigaciones Biomédicas Sant Pau (IIB-Sant Pau), Universitat Autònoma de Barcelona, REDinREN, Instituto de Investigación Carlos III, Cartagena 340-350, 08025, Barcelona, Catalonia, Spain.

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https://bmcnephrol.biomedcentral.com/articles/10.1186/s12882
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http://dx.doi.org/10.1186/s12882-019-1317-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6458604PMC
April 2019

Effect of Collapsed Duplications on Diversity Estimates: What to Expect.

Genome Biol Evol 2018 11 1;10(11):2899-2905. Epub 2018 Nov 1.

Institute of Evolutionary Biology (Universitat Pompeu Fabra - CSIC), PRBB, Barcelona, Catalonia, Spain.

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https://academic.oup.com/gbe/advance-article/doi/10.1093/gbe
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http://dx.doi.org/10.1093/gbe/evy223DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6239678PMC
November 2018

Secreted IgD Amplifies Humoral T Helper 2 Cell Responses by Binding Basophils via Galectin-9 and CD44.

Immunity 2018 10 2;49(4):709-724.e8. Epub 2018 Oct 2.

Department of Medicine, Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Mucosal Immunology Studies Team (MIST), National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20982, USA; Program for Inflammatory and Cardiovascular Disorders, Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), 08003 Barcelona, Spain; Catalan Institute for Research and Advanced Studies (ICREA), 08003 Barcelona, Spain. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S10747613183035
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http://dx.doi.org/10.1016/j.immuni.2018.08.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6366614PMC
October 2018

Human Secretory IgM Emerges from Plasma Cells Clonally Related to Gut Memory B Cells and Targets Highly Diverse Commensals.

Immunity 2017 07 11;47(1):118-134.e8. Epub 2017 Jul 11.

Program for Inflammatory and Cardiovascular Disorders, Institut Hospital del Mar d'Investigacions Mèdiques (IMIM), Barcelona 08003, Spain; Department of Medicine, Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Catalan Institute for Research and Advanced Studies (ICREA), Barcelona 08003, Spain. Electronic address:

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http://dx.doi.org/10.1016/j.immuni.2017.06.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5519504PMC
July 2017

Natural Selection in the Great Apes.

Mol Biol Evol 2016 12 30;33(12):3268-3283. Epub 2016 Oct 30.

Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.

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http://dx.doi.org/10.1093/molbev/msw215DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100057PMC
December 2016

Genomic analysis of Andamanese provides insights into ancient human migration into Asia and adaptation.

Nat Genet 2016 09 25;48(9):1066-70. Epub 2016 Jul 25.

Institut de Biologia Evolutiva (UPF-CSIC), Universitat Pompeu Fabra, Barcelona, Spain.

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http://dx.doi.org/10.1038/ng.3621DOI Listing
September 2016

Hierarchical boosting: a machine-learning framework to detect and classify hard selective sweeps in human populations.

Bioinformatics 2015 Dec 26;31(24):3946-52. Epub 2015 Aug 26.

Institut de Biologia Evolutiva (UPF-CSIC), Universitat Pompeu Fabra, Barcelona 08003, Spain.

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http://dx.doi.org/10.1093/bioinformatics/btv493DOI Listing
December 2015

Recent positive selection has acted on genes encoding proteins with more interactions within the whole human interactome.

Genome Biol Evol 2015 Apr 2;7(4):1141-54. Epub 2015 Apr 2.

Institute of Evolutionary Biology, Universitat Pompeu Fabra-CSIC, CEXS-UPF-PRBB, Barcelona, Catalonia, Spain Departament de Genètica i de Microbiologia, Grup de Biologia Evolutiva (GBE), Universitat Autonòma de Barcelona, Bellaterra, Spain

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http://dx.doi.org/10.1093/gbe/evv055DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4419801PMC
April 2015

1000 Genomes Selection Browser 1.0: a genome browser dedicated to signatures of natural selection in modern humans.

Nucleic Acids Res 2014 Jan 25;42(Database issue):D903-9. Epub 2013 Nov 25.

Program for Population Genetics, Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), 08003 Barcelona, Spain, Population Genomics Node, National Institute for Bioinformatics (INB), Universitat Pompeu Fabra, 08003 Barcelona, Spain, Institute of Molecular Biology and Biotechnology-FORTH, Heraklion, Crete GR 700 13, Greece and Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany.

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http://dx.doi.org/10.1093/nar/gkt1188DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965045PMC
January 2014

Great ape genetic diversity and population history.

Nature 2013 Jul 3;499(7459):471-5. Epub 2013 Jul 3.

Institut de Biologia Evolutiva, CSIC-Universitat Pompeu Fabra, PRBB, Doctor Aiguader 88, Barcelona, Catalonia 08003, Spain.

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http://dx.doi.org/10.1038/nature12228DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3822165PMC
July 2013

Sum of parts is greater than the whole: inference of common genetic history of populations.

BMC Genomics 2013 21;14 Suppl 1:S10. Epub 2013 Jan 21.

Computational Genomics, IBM T J Watson Research, Yorktown, USA.

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http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2164-14-S1-S10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3549811PMC
August 2013

IRiS: construction of ARG networks at genomic scales.

Bioinformatics 2011 Sep 15;27(17):2448-50. Epub 2011 Jul 15.

Computational Biology Center, IBM T J Watson Research, Yorktown Heights, NY 10598, USA.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btr423DOI Listing
September 2011

A new method to reconstruct recombination events at a genomic scale.

PLoS Comput Biol 2010 Nov 24;6(11):e1001010. Epub 2010 Nov 24.

IBE, Institute of Evolutionary Biology (UPF-CSIC), CEXS-UPF-PRBB, Barcelona, Catalonia, Spain.

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http://digital.csic.es/bitstream/10261/43629/1/journal.pcbi.
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http://dx.plos.org/10.1371/journal.pcbi.1001010
Publisher Site
http://dx.doi.org/10.1371/journal.pcbi.1001010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2991245PMC
November 2010