Manoj Kandpal

Identification of Geographic Specific SARS-Cov-2 Mutations by Random Forest Classification and Variable Selection Methods.

Authors:

Stat Appl 2020 Jul 30;18(1):253-268. Epub 2020 Jun 30.

Division of Health and Biomedical Informatics, Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.

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July 2020

FTO-Dependent -Methyladenosine Modifications Inhibit Ovarian Cancer Stem Cell Self-Renewal by Blocking cAMP Signaling.

Authors:

Hao Huang Yinu Wang Manoj Kandpal Guangyuan Zhao Horacio Cardenas Yanrong Ji Anusha Chaparala Edward J Tanner Jianjun Chen Ramana V Davuluri Daniela Matei

Cancer Res 2020 08 30;80(16):3200-3214. Epub 2020 Jun 30.

Department of Obstetrics and Gynecology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois.

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August 2020

Discovery and validation of a novel blood-based molecular biomarker of rejection following liver transplantation.

Authors:

Josh Levitsky Sumeet K Asrani Thomas Schiano Adyr Moss Kenneth Chavin Charles Miller Kexin Guo Lihui Zhao Manoj Kandpal Nancy Bridges Merideth Brown Brian Armstrong Sunil Kurian Anthony J Demetris Michael Abecassis

Am J Transplant 2020 08 25;20(8):2173-2183. Epub 2020 May 25.

University of Arizona College of Medicine, Tucson, Arizona.

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August 2020

Immune landscapes associated with different glioblastoma molecular subtypes.

Authors:

Maria Martinez-Lage Timothy M Lynch Yingtao Bi Carolina Cocito Gregory P Way Sharmistha Pal Josephine Haller Rachel E Yan Amy Ziober Aivi Nguyen Manoj Kandpal Donald M O'Rourke Jeffrey P Greenfield Casey S Greene Ramana V Davuluri Nadia Dahmane

Acta Neuropathol Commun 2019 11 29;7(1):203. Epub 2019 Nov 29.

Department of Neurosurgery, University of Pennsylvania School of Medicine, Philadelphia, PA, 19104, USA.

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November 2019

Transcriptional consequences of impaired immune cell responses induced by cystic fibrosis plasma characterized via dual RNA sequencing.

Authors:

Justin E Ideozu Vittobai Rangaraj Hiam Abdala-Valencia Xi Zhang Manoj Kandpal Marc A Sala Ramana V Davuluri Hara Levy

BMC Med Genomics 2019 05 22;12(1):66. Epub 2019 May 22.

Division of Pulmonary Medicine, Ann & Robert H. Lurie Children's Hospital of Chicago, Chicago, IL, 60611, USA.

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May 2019

Platform-Independent Classification System to Predict Molecular Subtypes of High-Grade Serous Ovarian Carcinoma.

Authors:

Arunima Shilpi Manoj Kandpal Yanrong Ji Brandon L Seagle Shohreh Shahabi Ramana V Davuluri

JCO Clin Cancer Inform 2019 04;3:1-9

Northwestern University, Chicago, IL.

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April 2019

A clinically relevant murine model unmasks a "two-hit" mechanism for reactivation and dissemination of cytomegalovirus after kidney transplant.

Authors:

Zheng Zhang Longhui Qiu Shixian Yan Jiao-Jing Wang Paul M Thomas Manoj Kandpal Lihui Zhao Andre Iovane Xue-Feng Liu Edward B Thorp Qing Chen Mary Hummel Yashpal S Kanwar Michael M Abecassis

Am J Transplant 2019 09 14;19(9):2421-2433. Epub 2019 May 14.

Comprehensive Transplant Center, Northwestern University, Feinberg School of Medicine, Chicago, Illinois.

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September 2019

Development and clinical validity of a novel blood-based molecular biomarker for subclinical acute rejection following kidney transplant.

Authors:

John J Friedewald Sunil M Kurian Raymond L Heilman Thomas C Whisenant Emilio D Poggio Christopher Marsh Prabhakar Baliga Jonah Odim Merideth M Brown David N Ikle Brian D Armstrong Jane I Charette Susan S Brietigam Nedjema Sustento-Reodica Lihui Zhao Manoj Kandpal Daniel R Salomon Michael M Abecassis

Am J Transplant 2019 01 31;19(1):98-109. Epub 2018 Aug 31.

Northwestern University Feinberg School of Medicine, Chicago, IL, USA.

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January 2019

Metastatic cancers promote cachexia through ZIP14 upregulation in skeletal muscle.

Authors:

Gang Wang Anup K Biswas Wanchao Ma Manoj Kandpal Courtney Coker Paul M Grandgenett Michael A Hollingsworth Rinku Jain Kurenai Tanji Sara Lόpez-Pintado Alain Borczuk Doreen Hebert Supak Jenkitkasemwong Shintaro Hojyo Ramana V Davuluri Mitchell D Knutson Toshiyuki Fukada Swarnali Acharyya

Nat Med 2018 06 6;24(6):770-781. Epub 2018 Jun 6.

Institute for Cancer Genetics, Columbia University, New York, NY, USA.

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June 2018

Association of increased primary breast tumor with decreased disease-specific survival.

Authors:

Phoebe Ann Brandon-Luke L Seagle Arunima Shilpi Manoj Kandpal Shohreh Shahabi

Oncotarget 2018 May 1;9(33):23114-23125. Epub 2018 May 1.

Division of Gynecologic Oncology, Department of Obstetrics and Gynecology, Northwestern University Feinberg School of Medicine, 60611 Chicago, IL, USA.

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May 2018

Comparative evaluation of isoform-level gene expression estimation algorithms for RNA-seq and exon-array platforms.

Authors:

Matthew Dapas Manoj Kandpal Yingtao Bi Ramana V Davuluri

Brief Bioinform 2017 03;18(2):260-269

Center for Systems and Computational Biology, Molecular and Cellular Oncogenesis Program, The Wistar Institute, 19104 Philadelphia, PA, USA.

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March 2017

Fluorescence and piezoresistive cantilever sensing of trinitrotoluene by an upper-rim tetrabenzimidazole conjugate of calix[4]arene and delineation of the features of the complex by molecular dynamics.

Authors:

Manoj Kandpal Anil Kumar Bandela Vijaya Kumar Hinge V Ramgopal Rao Chebrolu Pulla Rao

ACS Appl Mater Interfaces 2013 Dec 10;5(24):13448-56. Epub 2013 Dec 10.

Centre of Excellence in Nanoelectronics, Department of Electrical Engineering, §Bioinorganic Laboratory, Department of Chemistry, and ⊥Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay , Powai, Mumbai 400076, India.

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December 2013