Publications by authors named "Mannis van Oven"

45Publications

Forensic Y-SNP analysis beyond SNaPshot: High-resolution Y-chromosomal haplogrouping from low quality and quantity DNA using Ion AmpliSeq and targeted massively parallel sequencing.

Forensic Sci Int Genet 2019 07 27;41:93-106. Epub 2019 Apr 27.

Department of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Wytemaweg 80, 3000 CA, Rotterdam, the Netherlands. Electronic address:

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July 2019

Population data of 17 Y-STRs (Yfiler) from Punjabis and Kashmiris of Pakistan.

Int J Legal Med 2018 Jan 17;132(1):137-138. Epub 2017 May 17.

Department of Genetic Identification, Erasmus MC University Medical Center, Rotterdam, The Netherlands.

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January 2018

Origin and spread of human mitochondrial DNA haplogroup U7.

Sci Rep 2017 04 7;7:46044. Epub 2017 Apr 7.

Evolutionary Biology Group, Estonian Biocentre, Tartu 51010, Estonia.

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April 2017

High-quality mtDNA control region sequences from 680 individuals sampled across the Netherlands to establish a national forensic mtDNA reference database.

Forensic Sci Int Genet 2016 Mar 10;21:158-67. Epub 2015 Dec 10.

Department of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands. Electronic address:

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March 2016

Antiquity and diversity of aboriginal Australian Y-chromosomes.

Am J Phys Anthropol 2016 Mar 30;159(3):367-81. Epub 2015 Oct 30.

Department of Biochemistry and Genetics, La Trobe Institute of Molecular Sciences, La Trobe University, Melbourne, VIC, Australia.

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March 2016

Mitochondrial mutations in subjects with psychiatric disorders.

PLoS One 2015 26;10(5):e0127280. Epub 2015 May 26.

Functional Genomics Laboratory, Department of Psychiatry & Human Behavior, University of California Irvine, Irvine, California, United States of America.

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April 2016

Phy-Mer: a novel alignment-free and reference-independent mitochondrial haplogroup classifier.

Bioinformatics 2015 Apr 12;31(8):1310-2. Epub 2014 Dec 12.

Department of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, MA, USA, Center for Biomedical Informaticsand Center for Mitochondrial and Epigenomic Medicine, The Children's Hospital of Philadelphia, Philadelphia, PA, USA, Department of Clinical Genetics, Maastricht University Medical Centre, The Netherlands, Department of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA, Division of Human Genetics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA and Department of Forensic Molecular Biology, Erasmus MC, University Medical Center Rotterdam, Rotterdam, The Netherlands.

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April 2015

Towards a consensus Y-chromosomal phylogeny and Y-SNP set in forensics in the next-generation sequencing era.

Forensic Sci Int Genet 2015 Mar 15;15:39-42. Epub 2014 Nov 15.

UZ Leuven, Laboratory of Forensic Genetics and Molecular Archaeology, Leuven, Belgium; KU Leuven, Forensic Biomedical Sciences, Department of Imaging & Pathology, Leuven, Belgium.

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March 2015

Simultaneous analysis of hundreds of Y-chromosomal SNPs for high-resolution paternal lineage classification using targeted semiconductor sequencing.

Hum Mutat 2015 Jan 27;36(1):151-9. Epub 2014 Nov 27.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.

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January 2015

Developmental validation of mitochondrial DNA genotyping assays for adept matrilineal inference of biogeographic ancestry at a continental level.

Forensic Sci Int Genet 2014 Jul 23;11:39-51. Epub 2014 Feb 23.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center, Dr. Molewaterplein 50, 3015 GE Rotterdam, Zuid-Holland, The Netherlands. Electronic address:

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July 2014

Human genetics of the Kula Ring: Y-chromosome and mitochondrial DNA variation in the Massim of Papua New Guinea.

Eur J Hum Genet 2014 Dec 12;22(12):1393-403. Epub 2014 Mar 12.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.

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December 2014

Recent radiation within Y-chromosomal haplogroup R-M269 resulted in high Y-STR haplotype resemblance.

Ann Hum Genet 2014 Mar;78(2):92-103

Laboratory of Forensic Genetics and Molecular Archaeology, UZ Leuven, Leuven, Belgium; Department of Imaging & Pathology, Biomedical Forensic Sciences, KU Leuven, Leuven, Belgium; Laboratory of Biodiversity and Evolutionary Genomics, Department of Biology, KU Leuven, Leuven, Belgium.

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March 2014

Seeing the wood for the trees: a minimal reference phylogeny for the human Y chromosome.

Hum Mutat 2014 Feb 14;35(2):187-91. Epub 2013 Nov 14.

Department of Forensic Molecular Biology, Erasmus MC - University Medical Center Rotterdam, Rotterdam, The Netherlands.

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February 2014

Analysis of mitochondrial genome diversity identifies new and ancient maternal lineages in Cambodian aborigines.

Nat Commun 2013 ;4:2599

1] State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, China [2] University of Chinese Academy of Sciences, Beijing 100101, China [3].

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May 2014

Concept for estimating mitochondrial DNA haplogroups using a maximum likelihood approach (EMMA).

Forensic Sci Int Genet 2013 Dec 12;7(6):601-609. Epub 2013 Aug 12.

Institute of Legal Medicine, Innsbruck Medical University, Innsbruck, Austria; Penn State Eberly College of Science, University Park, PA, USA. Electronic address:

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December 2013

Multiplex genotyping assays for fine-resolution subtyping of the major human Y-chromosome haplogroups E, G, I, J, and R in anthropological, genealogical, and forensic investigations.

Electrophoresis 2013 Nov 19;34(20-21):3029-38. Epub 2013 Sep 19.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.

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November 2013

Clinal distribution of human genomic diversity across the Netherlands despite archaeological evidence for genetic discontinuities in Dutch population history.

Investig Genet 2013 May 20;4(1). Epub 2013 May 20.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, P,O, Box 2040, Rotterdam 3000 CA, Netherlands.

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May 2013

Indian Ocean crossroads: human genetic origin and population structure in the Maldives.

Am J Phys Anthropol 2013 May 21;151(1):58-67. Epub 2013 Mar 21.

Department of Human Genetics, Leiden University Medical Center, Postzone S5, 2300 RC Leiden, The Netherlands.

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May 2013

Haplogrouping mitochondrial DNA sequences in Legal Medicine/Forensic Genetics.

Int J Legal Med 2012 Nov 1;126(6):901-16. Epub 2012 Sep 1.

Department of Mathematics, University of Hamburg, 20146, Hamburg, Germany.

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November 2012

A "Copernican" reassessment of the human mitochondrial DNA tree from its root.

Am J Hum Genet 2012 Apr;90(4):675-84

Estonian Biocentre and Department of Evolutionary Biology, University of Tartu, Tartu, Estonia.

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April 2012

A multiplex SNP assay for the dissection of human Y-chromosome haplogroup O representing the major paternal lineage in East and Southeast Asia.

J Hum Genet 2012 Jan 3;57(1):65-9. Epub 2011 Nov 3.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.

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January 2012

MtDNA SNP multiplexes for efficient inference of matrilineal genetic ancestry within Oceania.

Forensic Sci Int Genet 2012 Jul 22;6(4):425-36. Epub 2011 Sep 22.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.

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July 2012

An efficient multiplex genotyping approach for detecting the major worldwide human Y-chromosome haplogroups.

Int J Legal Med 2011 Nov 22;125(6):879-85. Epub 2011 Jul 22.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.

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November 2011

Bridging near and remote Oceania: mtDNA and NRY variation in the Solomon Islands.

Mol Biol Evol 2012 Feb 18;29(2):545-64. Epub 2011 Jul 18.

Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.

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February 2012

Multiplex genotyping system for efficient inference of matrilineal genetic ancestry with continental resolution.

Investig Genet 2011 Mar 23;2. Epub 2011 Mar 23.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, 3000 CA Rotterdam, The Netherlands.

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March 2011

Unexpected island effects at an extreme: reduced Y chromosome and mitochondrial DNA diversity in Nias.

Mol Biol Evol 2011 Apr 8;28(4):1349-61. Epub 2010 Nov 8.

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.

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April 2011

Evaluating self-declared ancestry of U.S. Americans with autosomal, Y-chromosomal and mitochondrial DNA.

Hum Mutat 2010 Dec;31(12):E1875-93

Department of Forensic Molecular Biology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.

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December 2010

IrisPlex: a sensitive DNA tool for accurate prediction of blue and brown eye colour in the absence of ancestry information.

Forensic Sci Int Genet 2011 Jun 27;5(3):170-80. Epub 2010 Mar 27.

Department of Forensic Molecular Biology, Erasmus University Medical Centre Rotterdam, Rotterdam, The Netherlands.

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June 2011

Revision of the mtDNA tree and corresponding haplogroup nomenclature.

Authors:
Mannis van Oven

Proc Natl Acad Sci U S A 2010 Mar;107(11):E38-9; author reply e40-1

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March 2010

Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation.

Hum Mutat 2009 Feb;30(2):E386-94

Department of Forensic Molecular Biology, Erasmus University Medical Center Rotterdam, The Netherlands.

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February 2009

The impact of the Austronesian expansion: evidence from mtDNA and Y chromosome diversity in the Admiralty Islands of Melanesia.

Mol Biol Evol 2008 Jul 3;25(7):1362-74. Epub 2008 Apr 3.

Department of Forensic Molecular Biology, Erasmus University Medical Center Rotterdam, Rotterdam, the Netherlands.

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July 2008