Malcolm Perry

Malcolm Perry

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Malcolm Perry

Malcolm Perry

Publications by authors named "Malcolm Perry"

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Topologically associating domains are ancient features that coincide with Metazoan clusters of extreme noncoding conservation.

Nat Commun 2017 09 5;8(1):441. Epub 2017 Sep 5.

Computational Regulatory Genomics, MRC London Institute of Medical Sciences, London, W12 0NN, UK.

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http://dx.doi.org/10.1038/s41467-017-00524-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5585340PMC
September 2017

Lightest Visible-Sector Supersymmetric Particle is Likely to be Unstable.

Phys Rev Lett 2016 Oct 28;117(18):181802. Epub 2016 Oct 28.

DAMTP, Centre for Mathematical Sciences, Wilberforce Road, Cambridge CB3 0WA, United Kingdom.

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http://dx.doi.org/10.1103/PhysRevLett.117.181802DOI Listing
October 2016

Infrastructure for genomic interactions: Bioconductor classes for Hi-C, ChIA-PET and related experiments.

F1000Res 2016 20;5:950. Epub 2016 May 20.

MRC Clinical Sciences Centre, Faculty of Medicine, Imperial College London, London, UK.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4890298PMC
http://dx.doi.org/10.12688/f1000research.8759.2DOI Listing
July 2016

Soft Hair on Black Holes.

Phys Rev Lett 2016 Jun 6;116(23):231301. Epub 2016 Jun 6.

Center for the Fundamental Laws of Nature, Harvard University, Cambridge, Massachusetts 02138, USA.

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http://dx.doi.org/10.1103/PhysRevLett.116.231301DOI Listing
June 2016

GenomicInteractions: An R/Bioconductor package for manipulating and investigating chromatin interaction data.

BMC Genomics 2015 Nov 17;16:963. Epub 2015 Nov 17.

Computational Regulatory Genomics, MRC Clinical Sciences Centre, Faculty of Medicine, Imperial College, London, W12 0NN, UK.

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http://dx.doi.org/10.1186/s12864-015-2140-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4650858PMC
November 2015

An atypical biotype I Actinobacillus pleuropneumoniae serotype 13 is present in North America.

Vet Microbiol 2012 May 1;156(3-4):403-10. Epub 2011 Dec 1.

Institute for Biological Sciences, National Research Council, Ottawa, Ontario, Canada.

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http://dx.doi.org/10.1016/j.vetmic.2011.11.024DOI Listing
May 2012

Structure of the O-antigen polysaccharide present in the lipopolysaccharide of Cronobacter dublinensis (subspecies lactaridi or lausannensis) HPB 3169.

Can J Microbiol 2012 Apr 2;58(4):540-6. Epub 2012 Apr 2.

Institute for Biological Sciences, National Research Council, Ottawa, ON K1A 0R6, Canada.

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http://www.nrcresearchpress.com/doi/10.1139/w2012-022
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http://dx.doi.org/10.1139/w2012-022DOI Listing
April 2012

Francisella tularensis blue-gray phase variation involves structural modifications of lipopolysaccharide o-antigen, core and lipid a and affects intramacrophage survival and vaccine efficacy.

Front Microbiol 2010 19;1:129. Epub 2010 Nov 19.

Center for Microbial Interface Biology, Department of Molecular Virology, Immunology and Medical Genetics, and Department of Internal Medicine, Division of Infectious Diseases, The Ohio State University Columbus, OH, USA.

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http://dx.doi.org/10.3389/fmicb.2010.00129DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3109528PMC
July 2011

A new rapid and micro-scale hydrolysis, using triethylamine citrate, for lipopolysaccharide characterization by mass spectrometry.

Rapid Commun Mass Spectrom 2011 Jul;25(14):2043-8

Equipe 'ESA: Endotoxines, Structures et Activités', UMR 8621 du CNRS, Institut de Génétique et Microbiologie, Université de Paris-Sud, 91405 Orsay, France.

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http://dx.doi.org/10.1002/rcm.5084DOI Listing
July 2011

Physician medical direction and clinical performance at an established emergency medical services system.

Prehosp Emerg Care 2009 Apr-Jun;13(2):185-92

University of Pittsburgh Medical Center, Pittsburgh, Pennsylvania, USA.

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http://dx.doi.org/10.1080/10903120802706120DOI Listing
September 2010

The structure of the O-antigen of Cronobacter sakazakii HPB 2855 isolate involved in a neonatal infection.

Carbohydr Res 2010 Sep 6;345(13):1932-7. Epub 2010 Jul 6.

Institute for Biological Sciences, National Research Council, Ottawa, Canada.

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http://dx.doi.org/10.1016/j.carres.2010.06.020DOI Listing
September 2010

Study of matrix additives for sensitive analysis of lipid A by matrix-assisted laser desorption ionization mass spectrometry.

Appl Environ Microbiol 2010 Jun 9;76(11):3437-43. Epub 2010 Apr 9.

NRC Institute for Biological Sciences, National Research Council Canada, 100 Sussex Drive, Ottawa, Ontario, Canada.

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http://dx.doi.org/10.1128/AEM.03082-09DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2876463PMC
June 2010

The structure of the antigenic O-polysaccharide in the lipopolysaccharide of enterohaemorrhagic Escherichia coli serotype O71:H12.

Biochem Cell Biol 2010 Jun;88(3):439-44

Institute for Biological Sciences, National Research Council, Ottawa, ON K1A 0R6, Canada.

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http://dx.doi.org/10.1139/o09-114DOI Listing
June 2010

Structural determination of the O-antigenic polysaccharide of enteropathogenic Escherichia coli O103:H2.

Can J Microbiol 2010 May;56(5):366-72

Institute for Biological Sciences, National Research Council, 100 Sussex Drive, Ottawa, ON K1A 0R6, Canada.

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http://dx.doi.org/10.1139/w10-015DOI Listing
May 2010

Characterization of the antigenic O-polysaccharide produced by Escherichia coli serotype O:70.

Carbohydr Res 2010 Mar 16;345(5):644-8. Epub 2009 Dec 16.

Institute for Biological Sciences, National Research Council, Ottawa, ON, Canada K1A 0R6.

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http://dx.doi.org/10.1016/j.carres.2009.11.026DOI Listing
March 2010

Characterization of the O-antigen in the lipopolysaccharide of Cronobacter (Enterobacter) malonaticus 3267.

Biochem Cell Biol 2009 Dec;87(6):927-32

Institute for Biological Sciences, National Research Council, 100 Sussex Dr., Ottawa, ON K1A 0R6, Canada.

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http://dx.doi.org/10.1139/O09-059DOI Listing
December 2009

Structural characterization of Bordetella parapertussis lipid A.

J Lipid Res 2009 May 17;50(5):854-9. Epub 2008 Nov 17.

Equipe Endotoxines, UMR 8619 du Centre National de la Recherche Scientifique, Université de Paris-Sud, Orsay, France.

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http://dx.doi.org/10.1194/jlr.M800454-JLR200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2666171PMC
May 2009

Structural elucidation of the novel core oligosaccharide from LPS of Burkholderia cepacia serogroup O4.

Glycobiology 2009 May 13;19(5):462-71. Epub 2009 Jan 13.

Institute for Biological Sciences, National Research Council of Canada, Ottawa, Ontario, K1A 0R6, Canada.

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http://dx.doi.org/10.1093/glycob/cwn155DOI Listing
May 2009

Structure of the antigenic repeating pentasaccharide unit of the LPS O-polysaccharide of Cronobacter sakazakii implicated in the Tennessee outbreak.

Biochem Cell Biol 2009 Apr;87(2):459-65

Institute for Biological Sciences, National Research Council, Ottawa, ONK1A0R6, Canada.

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http://dx.doi.org/10.1139/O09-004DOI Listing
April 2009

The structure of the polysaccharide O-chain of the LPS from Acinetobacter baumannii strain ATCC 17961.

Carbohydr Res 2009 Mar 7;344(4):474-8. Epub 2009 Jan 7.

Institute for Biological Sciences, National Research Council Canada, ON, Canada.

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http://linkinghub.elsevier.com/retrieve/pii/S000862150800571
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http://dx.doi.org/10.1016/j.carres.2008.12.026DOI Listing
March 2009

The structure of the O-antigen in the endotoxin of the emerging food pathogen Cronobacter (Enterobacter) muytjensii strain 3270.

Carbohydr Res 2009 Mar 23;344(5):667-71. Epub 2009 Jan 23.

Institute for Biological Sciences, National Research Council, Ottawa, Canada K1A 0R6.

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http://dx.doi.org/10.1016/j.carres.2009.01.020DOI Listing
March 2009

The structure of the polysaccharide of the lipopolysaccharide produced by Taylorella equigenitalis type strain (ATCC 35865).

Carbohydr Res 2008 Dec 24;343(18):3079-84. Epub 2008 Sep 24.

Institute for Biological Sciences, National Research Council, Ottawa, Ontario, Canada.

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http://dx.doi.org/10.1016/j.carres.2008.09.015DOI Listing
December 2008

Structure of the O-polysaccharide of the lipopolysaccharide produced by Taylorella asinigenitalis type strain (ATCC 700933).

Biochem Cell Biol 2008 Jun;86(3):278-84

Institute for Biological Sciences, National Research Council, 100 Sussex Drive, Ottawa, ON, Canada.

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http://www.nrcresearchpress.com/doi/10.1139/O08-036
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http://dx.doi.org/10.1139/o08-036DOI Listing
June 2008

Structure of a novel lipid A obtained from the lipopolysaccharide of Caulobacter crescentus.

Innate Immun 2008 Feb;14(1):25-37

Department of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia, Canada.

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http://dx.doi.org/10.1177/1753425907087588DOI Listing
February 2008

The structure of the exocellular polysaccharide produced by Rhodococcus sp. RHA1.

Carbohydr Res 2007 Nov 13;342(15):2223-9. Epub 2007 Jul 13.

Institute for Biological Sciences, National Research Council, Ottawa, Canada K1A 0R6.

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http://dx.doi.org/10.1016/j.carres.2007.07.002DOI Listing
November 2007

A rapid, small-scale procedure for the structural characterization of lipid A applied to Citrobacter and Bordetella strains: discovery of a new structural element.

J Lipid Res 2007 Nov 16;48(11):2419-27. Epub 2007 Aug 16.

Equipe Endotoxines, Unité Mixte de Recherche 8619 du Centre National de la Recherche Scientifique, Institut de Biochimie et Biophysique Moléculaire et Cellulaire, Université de Paris-Sud, Orsay, France.

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http://dx.doi.org/10.1194/jlr.M700193-JLR200DOI Listing
November 2007

The structure of the carbohydrate backbone of the LPS from Myxococcus xanthus strain DK1622.

Carbohydr Res 2007 Nov 7;342(16):2474-80. Epub 2007 Aug 7.

Institute for Biological Sciences, National Research Council, 100 Sussex Dr., Ottawa, ON, Canada K1A 0R6.

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http://dx.doi.org/10.1016/j.carres.2007.07.023DOI Listing
November 2007

Structural elucidation of the O-antigenic polysaccharide from enterohemorrhagic (EHEC) Escherichia coli O48:H21.

Carbohydr Res 2006 Nov 1;341(15):2543-9. Epub 2006 Sep 1.

Institute for Biological Sciences, National Research Council, Ottawa, Canada K1A OR6.

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http://dx.doi.org/10.1016/j.carres.2006.08.008DOI Listing
November 2006

Characterization of the lipopolysaccharide and beta-glucan of the fish pathogen Francisella victoria.

FEBS J 2006 Jul 5;273(13):3002-13. Epub 2006 Jun 5.

Department of Biochemistry and Microbiology, University of Victoria, BC, Canada.

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http://dx.doi.org/10.1111/j.1742-4658.2006.05311.xDOI Listing
July 2006

The structure of the antigenic O-polysaccharide of the lipopolysaccharide of Edwardsiella ictaluri strain MT104.

Carbohydr Res 2005 Jun;340(8):1509-13

Institute for Biological Sciences, National Research Council, Ottawa, ON, Canada.

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http://dx.doi.org/10.1016/j.carres.2005.03.008DOI Listing
June 2005

Structural characterization of the antigenic capsular polysaccharide and lipopolysaccharide O-chain produced by Actinobacillus pleuropneumoniae serotype 15.

Biochem Cell Biol 2005 Feb;83(1):61-9

Institute for Biological Science, National Research Council Canada, Ottawa, ON K1A 0R6, Canada.

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http://dx.doi.org/10.1139/o04-112DOI Listing
February 2005

Structural characterization of the O-polysaccharide antigen of Edwardsiella tarda MT 108.

Carbohydr Res 2005 Jan;340(1):85-90

Institute for Biological Sciences, National Research Council, Ottawa, ON, K1A OR6, Canada.

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http://linkinghub.elsevier.com/retrieve/pii/S000862150400441
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http://dx.doi.org/10.1016/j.carres.2004.10.015DOI Listing
January 2005

The structure and biological characteristics of the Spirochaeta aurantia outer membrane glycolipid LGLB.

Eur J Biochem 2004 Dec;271(23-24):4685-95

Institute for Biological Sciences, National Research Council, Ottawa, ON, Canada.

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http://dx.doi.org/10.1111/j.1432-1033.2004.04433.xDOI Listing
December 2004

Structural analysis of the lipopolysaccharide derived core oligosaccharides of Actinobacillus pleuropneumoniae serotypes 1, 2, 5a and the genome strain 5b.

Carbohydr Res 2004 Aug;339(11):1973-84

Institute for Biological Sciences, National Research Council, 100 Sussex Drive, Ottawa, ON, Canada K1A 0R6.

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http://dx.doi.org/10.1016/j.carres.2004.04.019DOI Listing
August 2004

Lipopolysaccharide O-antigen antibody-based detection of the fish pathogen Flavobacterium psychrophilum.

J Mol Microbiol Biotechnol 2003 ;6(3-4):182-90

Department of Biochemistry and Microbiology, University of Victoria, Victoria, Canada.

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http://dx.doi.org/10.1159/000077249DOI Listing
July 2004

Characterisation of the core part of the lipopolysaccharide O-antigen of Francisella novicida (U112).

Carbohydr Res 2004 Jun;339(9):1643-8

Institute for Biological Sciences, National Research Council, Ottawa, Ontario, Canada K1A 0R6.

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http://linkinghub.elsevier.com/retrieve/pii/S000862150400187
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http://dx.doi.org/10.1016/j.carres.2004.04.013DOI Listing
June 2004

Structural characterization of the antigenic O-polysaccharide in the lipopolysaccharide produced by Actinobacillus pleuropneumoniae serotype 14.

Carbohydr Res 2004 May;339(7):1399-402

Institute for Biological Sciences, National Research Council of Canada, Ottawa, ON, Canada K1A OR6.

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http://dx.doi.org/10.1016/j.carres.2004.03.011DOI Listing
May 2004

Characterization of the lipopolysaccharide O-antigen of Francisella novicida (U112).

Carbohydr Res 2004 Feb;339(3):649-54

Institute for Biological Sciences, National Research Council, Ottawa, Ontario, Canada K1A OR6.

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http://dx.doi.org/10.1016/j.carres.2003.12.013DOI Listing
February 2004

The structure of the glycopeptides from the fish pathogen Flavobacterium columnare.

Carbohydr Res 2003 Nov;338(23):2653-8

Institute for Biological Sciences, National Research Council, 100 Sussex Dr., Ottawa, ON, Canada K1A 0R6.

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http://dx.doi.org/10.1016/j.carres.2003.08.012DOI Listing
November 2003

Structures of carbohydrates found n animals and bacteria.

Methods Mol Biol 2003 ;213:285-305

Faculty of Pharmaceutical Sciences, Kinki University, Higashi-osaka, Japan.

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October 2003

Structural characterization of the lipopolysaccharide O-polysaccharide antigen produced by Flavobacterium columnare ATCC 43622.

Eur J Biochem 2003 Aug;270(16):3440-6

Institute for Biological Sciences, National Research Council, Ottawa, Ontario, Canada.

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http://dx.doi.org/10.1046/j.1432-1033.2003.03736.xDOI Listing
August 2003

Structure of the polysaccharide chain of the lipopolysaccharide from Flexibacter maritimus.

Eur J Biochem 2003 Apr;270(8):1810-5

Institute for Biological Sciences, National Research Council, Ottawa, Ontario, Canada.

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http://dx.doi.org/10.1046/j.1432-1033.2003.03543.xDOI Listing
April 2003

Structural analysis of Francisella tularensis lipopolysaccharide.

Eur J Biochem 2002 Dec;269(24):6112-8

Institute for Biological Sciences, National Research Council, Ottawa, Canada.

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http://dx.doi.org/10.1046/j.1432-1033.2002.03321.xDOI Listing
December 2002

Reperfusion Syndrome.

Authors:
Malcolm O Perry

Surg Technol Int 1991 Nov;I:158-159

Professor of Surgery, Vanderbilt University School of Medicine, Nashville, Tennessee.

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November 1991