Lynn Fink

Lynn Fink

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Lynn Fink

Lynn Fink

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Chromosome arm aneuploidies shape tumour evolution and drug response.

Nat Commun 2020 01 23;11(1):449. Epub 2020 Jan 23.

University of Queensland Diamantina Institute, The University of Queensland, Translational Research Institute, 37 Kent Street, Brisbane, QLD, 4102, Australia.

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http://dx.doi.org/10.1038/s41467-020-14286-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6978319PMC
January 2020

Erratum: deletion drives acute myeloid leukemia resistance to MEK inhibitors.

Oncotarget 2020 Jan 21;11(3):305. Epub 2020 Jan 21.

The University of Queensland Diamantina Institute, The University of Queensland, Woolloongabba, Australia.

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http://dx.doi.org/10.18632/oncotarget.27402DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6980628PMC
January 2020

deletion drives acute myeloid leukemia resistance to MEK inhibitors.

Oncotarget 2019 Oct 8;10(56):5755-5767. Epub 2019 Oct 8.

The University of Queensland Diamantina Institute, The University of Queensland, Woolloongabba, Australia.

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http://dx.doi.org/10.18632/oncotarget.27206DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6791388PMC
October 2019

Subclonal evolution in disease progression from MGUS/SMM to multiple myeloma is characterised by clonal stability.

Leukemia 2019 02 25;33(2):457-468. Epub 2018 Jul 25.

Myeloma Research Laboratory, Adelaide Medical School, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, SA, 5005, Australia.

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http://dx.doi.org/10.1038/s41375-018-0206-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6365384PMC
February 2019

Using genomics to better define high-risk MGUS/SMM patients.

Oncotarget 2018 Nov 27;9(93):36549-36550. Epub 2018 Nov 27.

Andrew C.W. Zannettino: Myeloma Research Laboratory, Adelaide Medical School, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, SA, Australia; Cancer Theme, South Australian Health and Medical Research Institute (SAHMRI), Adelaide, SA, Australia.

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http://dx.doi.org/10.18632/oncotarget.26390DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6290965PMC
November 2018

Erythrocyte microRNA sequencing reveals differential expression in relapsing-remitting multiple sclerosis.

BMC Med Genomics 2018 05 21;11(1):48. Epub 2018 May 21.

School of Medicine and Public Health, University of Newcastle, Callaghan, NSW, 2308, Australia.

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http://dx.doi.org/10.1186/s12920-018-0365-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5963124PMC
May 2018

Targeted Next-Generation Sequencing for Detecting Gene Fusions in Leukemia.

Mol Cancer Res 2018 02 13;16(2):279-285. Epub 2017 Nov 13.

The University of Queensland Diamantina Institute, Translational Research Institute, Brisbane, Australia.

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http://dx.doi.org/10.1158/1541-7786.MCR-17-0569DOI Listing
February 2018

Translocation Breakpoints Preferentially Occur in Euchromatin and Acrocentric Chromosomes.

Cancers (Basel) 2018 Jan 8;10(1). Epub 2018 Jan 8.

University of Queensland Diamantina Institute, The University of Queensland, Translational Research Institute, 37 Kent Street, Brisbane, QLD 4102, Australia.

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http://dx.doi.org/10.3390/cancers10010013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5789363PMC
January 2018

Corrigendum: Whole-genome landscape of pancreatic neuroendocrine tumours.

Authors:
Aldo Scarpa David K Chang Katia Nones Vincenzo Corbo Ann-Marie Patch Peter Bailey Rita T Lawlor Amber L Johns David K Miller Andrea Mafficini Borislav Rusev Maria Scardoni Davide Antonello Stefano Barbi Katarzyna O Sikora Sara Cingarlini Caterina Vicentini Skye McKay Michael C J Quinn Timothy J C Bruxner Angelika N Christ Ivon Harliwong Senel Idrisoglu Suzanne McLean Craig Nourse Ehsan Nourbakhsh Peter J Wilson Matthew J Anderson J Lynn Fink Felicity Newell Nick Waddell Oliver Holmes Stephen H Kazakoff Conrad Leonard Scott Wood Qinying Xu Shivashankar Hiriyur Nagaraj Eliana Amato Irene Dalai Samantha Bersani Ivana Cataldo Angelo P Dei Tos Paola Capelli Maria Vittoria Davì Luca Landoni Anna Malpaga Marco Miotto Vicki L J Whitehall Barbara A Leggett Janelle L Harris Jonathan Harris Marc D Jones Jeremy Humphris Lorraine A Chantrill Venessa Chin Adnan M Nagrial Marina Pajic Christopher J Scarlett Andreia Pinho Ilse Rooman Christopher Toon Jianmin Wu Mark Pinese Mark Cowley Andrew Barbour Amanda Mawson Emily S Humphrey Emily K Colvin Angela Chou Jessica A Lovell Nigel B Jamieson Fraser Duthie Marie-Claude Gingras William E Fisher Rebecca A Dagg Loretta M S Lau Michael Lee Hilda A Pickett Roger R Reddel Jaswinder S Samra James G Kench Neil D Merrett Krishna Epari Nam Q Nguyen Nikolajs Zeps Massimo Falconi Michele Simbolo Giovanni Butturini George Van Buren Stefano Partelli Matteo Fassan Kum Kum Khanna Anthony J Gill David A Wheeler Richard A Gibbs Elizabeth A Musgrove Claudio Bassi Giampaolo Tortora Paolo Pederzoli John V Pearson Nicola Waddell Andrew V Biankin Sean M Grimmond

Nature 2017 10 27;550(7677):548. Epub 2017 Sep 27.

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http://dx.doi.org/10.1038/nature24026DOI Listing
October 2017

Cutting edge genomics reveal new insights into tumour development, disease progression and therapeutic impacts in multiple myeloma.

Br J Haematol 2017 07 3;178(2):196-208. Epub 2017 May 3.

School of Medicine Adelaide Medical School, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, SA, Australia.

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http://dx.doi.org/10.1111/bjh.14649DOI Listing
July 2017

Whole-genome landscape of pancreatic neuroendocrine tumours.

Authors:
Aldo Scarpa David K Chang Katia Nones Vincenzo Corbo Ann-Marie Patch Peter Bailey Rita T Lawlor Amber L Johns David K Miller Andrea Mafficini Borislav Rusev Maria Scardoni Davide Antonello Stefano Barbi Katarzyna O Sikora Sara Cingarlini Caterina Vicentini Skye McKay Michael C J Quinn Timothy J C Bruxner Angelika N Christ Ivon Harliwong Senel Idrisoglu Suzanne McLean Craig Nourse Ehsan Nourbakhsh Peter J Wilson Matthew J Anderson J Lynn Fink Felicity Newell Nick Waddell Oliver Holmes Stephen H Kazakoff Conrad Leonard Scott Wood Qinying Xu Shivashankar Hiriyur Nagaraj Eliana Amato Irene Dalai Samantha Bersani Ivana Cataldo Angelo P Dei Tos Paola Capelli Maria Vittoria Davì Luca Landoni Anna Malpaga Marco Miotto Vicki L J Whitehall Barbara A Leggett Janelle L Harris Jonathan Harris Marc D Jones Jeremy Humphris Lorraine A Chantrill Venessa Chin Adnan M Nagrial Marina Pajic Christopher J Scarlett Andreia Pinho Ilse Rooman Christopher Toon Jianmin Wu Mark Pinese Mark Cowley Andrew Barbour Amanda Mawson Emily S Humphrey Emily K Colvin Angela Chou Jessica A Lovell Nigel B Jamieson Fraser Duthie Marie-Claude Gingras William E Fisher Rebecca A Dagg Loretta M S Lau Michael Lee Hilda A Pickett Roger R Reddel Jaswinder S Samra James G Kench Neil D Merrett Krishna Epari Nam Q Nguyen Nikolajs Zeps Massimo Falconi Michele Simbolo Giovanni Butturini George Van Buren Stefano Partelli Matteo Fassan Kum Kum Khanna Anthony J Gill David A Wheeler Richard A Gibbs Elizabeth A Musgrove Claudio Bassi Giampaolo Tortora Paolo Pederzoli John V Pearson Nicola Waddell Andrew V Biankin Sean M Grimmond

Nature 2017 03 15;543(7643):65-71. Epub 2017 Feb 15.

University of Melbourne Centre for Cancer Research, University of Melbourne, Melbourne, 3010, Victoria, Australia.

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http://dx.doi.org/10.1038/nature21063DOI Listing
March 2017

Hypermutation In Pancreatic Cancer.

Gastroenterology 2017 01 15;152(1):68-74.e2. Epub 2016 Nov 15.

Wolfson Wohl Cancer Research Centre, Institute of Cancer Sciences, University of Glasgow, Glasgow, Scotland, United Kingdom; Department of Surgery, Bankstown Hospital, Bankstown, Sydney, New South Wales, Australia; South Western Sydney Clinical School, Faculty of Medicine, University of New South Wales Australia, Liverpool, New South Wales, Australia; West of Scotland Pancreatic Unit, Glasgow Royal Infirmary, Glasgow, United Kingdom. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00165085163518
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http://dx.doi.org/10.1053/j.gastro.2016.09.060DOI Listing
January 2017

Genomic analyses identify molecular subtypes of pancreatic cancer.

Authors:
Peter Bailey David K Chang Katia Nones Amber L Johns Ann-Marie Patch Marie-Claude Gingras David K Miller Angelika N Christ Tim J C Bruxner Michael C Quinn Craig Nourse L Charles Murtaugh Ivon Harliwong Senel Idrisoglu Suzanne Manning Ehsan Nourbakhsh Shivangi Wani Lynn Fink Oliver Holmes Venessa Chin Matthew J Anderson Stephen Kazakoff Conrad Leonard Felicity Newell Nick Waddell Scott Wood Qinying Xu Peter J Wilson Nicole Cloonan Karin S Kassahn Darrin Taylor Kelly Quek Alan Robertson Lorena Pantano Laura Mincarelli Luis N Sanchez Lisa Evers Jianmin Wu Mark Pinese Mark J Cowley Marc D Jones Emily K Colvin Adnan M Nagrial Emily S Humphrey Lorraine A Chantrill Amanda Mawson Jeremy Humphris Angela Chou Marina Pajic Christopher J Scarlett Andreia V Pinho Marc Giry-Laterriere Ilse Rooman Jaswinder S Samra James G Kench Jessica A Lovell Neil D Merrett Christopher W Toon Krishna Epari Nam Q Nguyen Andrew Barbour Nikolajs Zeps Kim Moran-Jones Nigel B Jamieson Janet S Graham Fraser Duthie Karin Oien Jane Hair Robert Grützmann Anirban Maitra Christine A Iacobuzio-Donahue Christopher L Wolfgang Richard A Morgan Rita T Lawlor Vincenzo Corbo Claudio Bassi Borislav Rusev Paola Capelli Roberto Salvia Giampaolo Tortora Debabrata Mukhopadhyay Gloria M Petersen Donna M Munzy William E Fisher Saadia A Karim James R Eshleman Ralph H Hruban Christian Pilarsky Jennifer P Morton Owen J Sansom Aldo Scarpa Elizabeth A Musgrove Ulla-Maja Hagbo Bailey Oliver Hofmann Robert L Sutherland David A Wheeler Anthony J Gill Richard A Gibbs John V Pearson Nicola Waddell Andrew V Biankin Sean M Grimmond

Nature 2016 Mar 24;531(7592):47-52. Epub 2016 Feb 24.

Queensland Centre for Medical Genomics, Institute for Molecular Bioscience, The University of Queensland, St Lucia, Brisbane, Queensland 4072, Australia.

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http://dx.doi.org/10.1038/nature16965DOI Listing
March 2016

Whole-genome characterization of chemoresistant ovarian cancer.

Nature 2015 May;521(7553):489-94

1] Peter MacCallum Cancer Centre, East Melbourne, Victoria 3002, Australia [2] Department of Pathology, University of Melbourne, Parkville, Victoria 3052, Australia [3] Sir Peter MacCallum Cancer Centre Department of Oncology, University of Melbourne, Parkville, Victoria 3052, Australia [4] Ovarian Cancer Action Research Centre, Department of Surgery and Cancer, Imperial College London, London W12 0HS, UK [5] Department of Biochemistry and Molecular Biology, University of Melbourne, Parkville, Victoria 3052, Australia.

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http://dx.doi.org/10.1038/nature14410DOI Listing
May 2015

Whole genomes redefine the mutational landscape of pancreatic cancer.

Nature 2015 Feb;518(7540):495-501

1] Queensland Centre for Medical Genomics, Institute for Molecular Bioscience, The University of Queensland, St Lucia, Brisbane, Queensland 4072, Australia [2] Wolfson Wohl Cancer Research Centre, Institute of Cancer Sciences, University of Glasgow, Garscube Estate, Switchback Road, Bearsden, Glasgow G61 1BD, UK.

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http://dx.doi.org/10.1038/nature14169DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4523082PMC
February 2015

A workflow to increase verification rate of chromosomal structural rearrangements using high-throughput next-generation sequencing.

Biotechniques 2014 Jul 1;57(1):31-8. Epub 2014 Jul 1.

Queensland Centre for Medical Genomics, Institute for Molecular Bioscience, University of Queensland, St Lucia, Brisbane, QLD, Australia; Wolfson Wohl Cancer Research Centre, Institute for Cancer Sciences, University of Glasgow, Glasgow, Scotland, United Kingdom.

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http://dx.doi.org/10.2144/000114189DOI Listing
July 2014

Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes.

Authors:
Andrew V Biankin Nicola Waddell Karin S Kassahn Marie-Claude Gingras Lakshmi B Muthuswamy Amber L Johns David K Miller Peter J Wilson Ann-Marie Patch Jianmin Wu David K Chang Mark J Cowley Brooke B Gardiner Sarah Song Ivon Harliwong Senel Idrisoglu Craig Nourse Ehsan Nourbakhsh Suzanne Manning Shivangi Wani Milena Gongora Marina Pajic Christopher J Scarlett Anthony J Gill Andreia V Pinho Ilse Rooman Matthew Anderson Oliver Holmes Conrad Leonard Darrin Taylor Scott Wood Qinying Xu Katia Nones J Lynn Fink Angelika Christ Tim Bruxner Nicole Cloonan Gabriel Kolle Felicity Newell Mark Pinese R Scott Mead Jeremy L Humphris Warren Kaplan Marc D Jones Emily K Colvin Adnan M Nagrial Emily S Humphrey Angela Chou Venessa T Chin Lorraine A Chantrill Amanda Mawson Jaswinder S Samra James G Kench Jessica A Lovell Roger J Daly Neil D Merrett Christopher Toon Krishna Epari Nam Q Nguyen Andrew Barbour Nikolajs Zeps Nipun Kakkar Fengmei Zhao Yuan Qing Wu Min Wang Donna M Muzny William E Fisher F Charles Brunicardi Sally E Hodges Jeffrey G Reid Jennifer Drummond Kyle Chang Yi Han Lora R Lewis Huyen Dinh Christian J Buhay Timothy Beck Lee Timms Michelle Sam Kimberly Begley Andrew Brown Deepa Pai Ami Panchal Nicholas Buchner Richard De Borja Robert E Denroche Christina K Yung Stefano Serra Nicole Onetto Debabrata Mukhopadhyay Ming-Sound Tsao Patricia A Shaw Gloria M Petersen Steven Gallinger Ralph H Hruban Anirban Maitra Christine A Iacobuzio-Donahue Richard D Schulick Christopher L Wolfgang Richard A Morgan Rita T Lawlor Paola Capelli Vincenzo Corbo Maria Scardoni Giampaolo Tortora Margaret A Tempero Karen M Mann Nancy A Jenkins Pedro A Perez-Mancera David J Adams David A Largaespada Lodewyk F A Wessels Alistair G Rust Lincoln D Stein David A Tuveson Neal G Copeland Elizabeth A Musgrove Aldo Scarpa James R Eshleman Thomas J Hudson Robert L Sutherland David A Wheeler John V Pearson John D McPherson Richard A Gibbs Sean M Grimmond

Nature 2012 Nov 24;491(7424):399-405. Epub 2012 Oct 24.

The Kinghorn Cancer Centre, 370 Victoria Street, Darlinghurst, Sydney, New South Wales 2010, Australia.

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http://dx.doi.org/10.1038/nature11547DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3530898PMC
November 2012

Integration of open access literature into the RCSB Protein Data Bank using BioLit.

BMC Bioinformatics 2010 Apr 29;11:220. Epub 2010 Apr 29.

San Diego Supercomputer Center, University of California San Diego, 9500 Gilman Drive, Mailcode 0505 La Jolla, CA 92093-0505, USA.

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http://dx.doi.org/10.1186/1471-2105-11-220DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2880030PMC
April 2010

Word add-in for ontology recognition: semantic enrichment of scientific literature.

BMC Bioinformatics 2010 Feb 24;11:103. Epub 2010 Feb 24.

Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, CA 92093-0444, USA.

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http://dx.doi.org/10.1186/1471-2105-11-103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2837026PMC
February 2010

The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.

Authors:
Harukazu Suzuki Alistair R R Forrest Erik van Nimwegen Carsten O Daub Piotr J Balwierz Katharine M Irvine Timo Lassmann Timothy Ravasi Yuki Hasegawa Michiel J L de Hoon Shintaro Katayama Kate Schroder Piero Carninci Yasuhiro Tomaru Mutsumi Kanamori-Katayama Atsutaka Kubosaki Altuna Akalin Yoshinari Ando Erik Arner Maki Asada Hiroshi Asahara Timothy Bailey Vladimir B Bajic Denis Bauer Anthony G Beckhouse Nicolas Bertin Johan Björkegren Frank Brombacher Erika Bulger Alistair M Chalk Joe Chiba Nicole Cloonan Adam Dawe Josee Dostie Pär G Engström Magbubah Essack Geoffrey J Faulkner J Lynn Fink David Fredman Ko Fujimori Masaaki Furuno Takashi Gojobori Julian Gough Sean M Grimmond Mika Gustafsson Megumi Hashimoto Takehiro Hashimoto Mariko Hatakeyama Susanne Heinzel Winston Hide Oliver Hofmann Michael Hörnquist Lukasz Huminiecki Kazuho Ikeo Naoko Imamoto Satoshi Inoue Yusuke Inoue Ryoko Ishihara Takao Iwayanagi Anders Jacobsen Mandeep Kaur Hideya Kawaji Markus C Kerr Ryuichiro Kimura Syuhei Kimura Yasumasa Kimura Hiroaki Kitano Hisashi Koga Toshio Kojima Shinji Kondo Takeshi Konno Anders Krogh Adele Kruger Ajit Kumar Boris Lenhard Andreas Lennartsson Morten Lindow Marina Lizio Cameron Macpherson Norihiro Maeda Christopher A Maher Monique Maqungo Jessica Mar Nicholas A Matigian Hideo Matsuda John S Mattick Stuart Meier Sei Miyamoto Etsuko Miyamoto-Sato Kazuhiko Nakabayashi Yutaka Nakachi Mika Nakano Sanne Nygaard Toshitsugu Okayama Yasushi Okazaki Haruka Okuda-Yabukami Valerio Orlando Jun Otomo Mikhail Pachkov Nikolai Petrovsky Charles Plessy John Quackenbush Aleksandar Radovanovic Michael Rehli Rintaro Saito Albin Sandelin Sebastian Schmeier Christian Schönbach Ariel S Schwartz Colin A Semple Miho Sera Jessica Severin Katsuhiko Shirahige Cas Simons George St Laurent Masanori Suzuki Takahiro Suzuki Matthew J Sweet Ryan J Taft Shizu Takeda Yoichi Takenaka Kai Tan Martin S Taylor Rohan D Teasdale Jesper Tegnér Sarah Teichmann Eivind Valen Claes Wahlestedt Kazunori Waki Andrew Waterhouse Christine A Wells Ole Winther Linda Wu Kazumi Yamaguchi Hiroshi Yanagawa Jun Yasuda Mihaela Zavolan David A Hume Takahiro Arakawa Shiro Fukuda Kengo Imamura Chikatoshi Kai Ai Kaiho Tsugumi Kawashima Chika Kawazu Yayoi Kitazume Miki Kojima Hisashi Miura Kayoko Murakami Mitsuyoshi Murata Noriko Ninomiya Hiromi Nishiyori Shohei Noma Chihiro Ogawa Takuma Sano Christophe Simon Michihira Tagami Yukari Takahashi Jun Kawai Yoshihide Hayashizaki

Nat Genet 2009 May 19;41(5):553-62. Epub 2009 Apr 19.

RIKEN Omics Science Center, RIKEN Yokohama Institute, Kanagawa, Japan.

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http://dx.doi.org/10.1038/ng.375DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6711855PMC
May 2009

I am not a scientist, I am a number.

PLoS Comput Biol 2008 Dec 26;4(12):e1000247. Epub 2008 Dec 26.

Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.

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http://dx.doi.org/10.1371/journal.pcbi.1000247DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2586848PMC
December 2008

BioLit: integrating biological literature with databases.

Nucleic Acids Res 2008 Jul 31;36(Web Server issue):W385-9. Epub 2008 May 31.

Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, CA, 92093-0444, USA.

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http://dx.doi.org/10.1093/nar/gkn317DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447735PMC
July 2008

Computational biology resources lack persistence and usability.

PLoS Comput Biol 2008 Jul 18;4(7):e1000136. Epub 2008 Jul 18.

San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA.

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http://dx.plos.org/10.1371/journal.pcbi.1000136
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http://dx.doi.org/10.1371/journal.pcbi.1000136DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2443418PMC
July 2008

Intrinsic evaluation of text mining tools may not predict performance on realistic tasks.

Pac Symp Biocomput 2008 :640-51

Center for Computational Pharmacology, University of Colorado Health Sciences Center, Aurora, CO, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2517250PMC
March 2008

Open access: taking full advantage of the content.

PLoS Comput Biol 2008 Mar 28;4(3):e1000037. Epub 2008 Mar 28.

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http://dx.doi.org/10.1371/journal.pcbi.1000037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2275780PMC
March 2008

DomainDraw: a macromolecular feature drawing program.

In Silico Biol 2007 ;7(2):145-50

ARC Centre in Bioinformatics, University of Queensland, St Lucia, Queensland, Australia.

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January 2008

LOCATE: a mammalian protein subcellular localization database.

Nucleic Acids Res 2008 Jan 5;36(Database issue):D230-3. Epub 2007 Nov 5.

ARC Centre of Excellence in Bioinformatics, Institute for Molecular Bioscience, The University of Queensland, St Lucia, Queensland 4072, Australia.

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http://dx.doi.org/10.1093/nar/gkm950DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2238969PMC
January 2008

Towards defining the nuclear proteome.

Genome Biol 2008 Jan 23;9(1):R15. Epub 2008 Jan 23.

ARC Centre of Excellence in Bioinformatics, The University of Queensland, St Lucia, Queensland, 4072, Australia.

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http://dx.doi.org/10.1186/gb-2008-9-1-r15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2395251PMC
January 2008

Evaluation and comparison of mammalian subcellular localization prediction methods.

BMC Bioinformatics 2006 Dec 18;7 Suppl 5:S3. Epub 2006 Dec 18.

ARC Special Research Centre for Functional and Applied Genomics, Brisbane, QLD 4072, Australia.

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http://dx.doi.org/10.1186/1471-2105-7-S5-S3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1764480PMC
December 2006

Subcellular localization of mammalian type II membrane proteins.

Traffic 2006 May;7(5):613-25

Institute for Molecular Bioscience and ARC Centre in Bioinformatics, University of Queensland, St. Lucia, Queensland 4072, Australia.

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http://dx.doi.org/10.1111/j.1600-0854.2006.00407.xDOI Listing
May 2006

LOCATE: a mouse protein subcellular localization database.

Nucleic Acids Res 2006 Jan;34(Database issue):D213-7

ARC Centre in Bioinformatics, University of Queensland, St Lucia, Queensland 4072, Australia.

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http://dx.doi.org/10.1093/nar/gkj069DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347432PMC
January 2006

IL-2- and STAT5-regulated cytokine gene expression in cells expressing the Tax protein of HTLV-1.

Oncogene 2005 Jul;24(29):4624-33

Department of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA 92182-4614, USA.

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http://dx.doi.org/10.1038/sj.onc.1208507DOI Listing
July 2005

Rival penalized competitive learning (RPCL): a topology-determining algorithm for analyzing gene expression data.

Comput Biol Chem 2003 Dec;27(6):565-74

San Diego Supercomputer Center, University of California at San Diego, 9500 Gilman Dr, La Jolla, CA 92093-0537, USA.

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http://dx.doi.org/10.1016/j.compbiolchem.2003.09.006DOI Listing
December 2003

2HAPI: a microarray data analysis system.

Bioinformatics 2003 Jul;19(11):1443-5

San Diego Supercomputer Center, Department of Biology, University of California, San Diego, 9500 Gilman Drive, San Diego, CA 92093-0537, USA.

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http://dx.doi.org/10.1093/bioinformatics/btg169DOI Listing
July 2003

Fundamentals of protein structure.

Methods Biochem Anal 2003 ;44:15-39

Biomedical Sciences Program, University of California, San Diego, La Jolla, CA, USA.

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April 2003

The PlantsP and PlantsT Functional Genomics Databases.

Nucleic Acids Res 2003 Jan;31(1):342-4

San Diego Supercomputer Center, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0537, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC165472PMC
http://dx.doi.org/10.1093/nar/gkg025DOI Listing
January 2003

Use of keyword hierarchies to interpret gene expression patterns.

Bioinformatics 2001 Apr;17(4):319-26

Department of Medicine, UCSD Cancer Center, University of California, San Diego, San Diego, CA 92093, USA.

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http://dx.doi.org/10.1093/bioinformatics/17.4.319DOI Listing
April 2001