Publications by authors named "Luigi Marchionni"

95Publications

Newly identified members of fibroblast growth factor receptor 1 splice variants engage in crosstalk with the AXL/AKT axis in salivary adenoid cystic carcinoma.

Authors:
Joseph O Humtsoe Hyun-Su Kim Brandon Leonard Shizhang Ling Bhumsuk Keam Luigi Marchionni Bahman Afsari Michael Considine Alexander V Favorov Elana J Fertig Hyunseok Kang Patrick K Ha

Cancer Res 2021 Jan 6. Epub 2021 Jan 6.

Department of Otolaryngology Head and Neck Surgery, University of California, San Francisco

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January 2021

Identifying Personalized Metabolic Signatures in Breast Cancer.

Authors:
Priyanka Baloni Wikum Dinalankara John C Earls Theo A Knijnenburg Donald Geman Luigi Marchionni Nathan D Price

Metabolites 2020 Dec 30;11(1). Epub 2020 Dec 30.

Institute for Systems Biology, Seattle, WA 98109, USA.

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December 2020

GULP1 regulates the NRF2-KEAP1 signaling axis in urothelial carcinoma.

Authors:
Masamichi Hayashi Elisa Guida Yoshikuni Inokawa Rachel Goldberg Leonardo O Reis Akira Ooki Manohar Pilli Pritam Sadhukhan Juhyung Woo Woonyoung Choi Evgeny Izumchenko Leonel Maldonado Gonzalez Luigi Marchionni Alex Zhavoronkov Mariana Brait Trinity Bivalacqua Alexander Baras George J Netto Wayne Koch Anju Singh Mohammad O Hoque

Sci Signal 2020 Aug 18;13(645). Epub 2020 Aug 18.

Department of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, MD 21231, USA.

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August 2020

Functional annotation of human long noncoding RNAs via molecular phenotyping.

Authors:
Jordan A Ramilowski Chi Wai Yip Saumya Agrawal Jen-Chien Chang Yari Ciani Ivan V Kulakovskiy Mickaël Mendez Jasmine Li Ching Ooi John F Ouyang Nick Parkinson Andreas Petri Leonie Roos Jessica Severin Kayoko Yasuzawa Imad Abugessaisa Altuna Akalin Ivan V Antonov Erik Arner Alessandro Bonetti Hidemasa Bono Beatrice Borsari Frank Brombacher Christopher JF Cameron Carlo Vittorio Cannistraci Ryan Cardenas Melissa Cardon Howard Chang Josée Dostie Luca Ducoli Alexander Favorov Alexandre Fort Diego Garrido Noa Gil Juliette Gimenez Reto Guler Lusy Handoko Jayson Harshbarger Akira Hasegawa Yuki Hasegawa Kosuke Hashimoto Norihito Hayatsu Peter Heutink Tetsuro Hirose Eddie L Imada Masayoshi Itoh Bogumil Kaczkowski Aditi Kanhere Emily Kawabata Hideya Kawaji Tsugumi Kawashima S Thomas Kelly Miki Kojima Naoto Kondo Haruhiko Koseki Tsukasa Kouno Anton Kratz Mariola Kurowska-Stolarska Andrew Tae Jun Kwon Jeffrey Leek Andreas Lennartsson Marina Lizio Fernando López-Redondo Joachim Luginbühl Shiori Maeda Vsevolod J Makeev Luigi Marchionni Yulia A Medvedeva Aki Minoda Ferenc Müller Manuel Muñoz-Aguirre Mitsuyoshi Murata Hiromi Nishiyori Kazuhiro R Nitta Shuhei Noguchi Yukihiko Noro Ramil Nurtdinov Yasushi Okazaki Valerio Orlando Denis Paquette Callum J C Parr Owen J L Rackham Patrizia Rizzu Diego Fernando Sánchez Martinez Albin Sandelin Pillay Sanjana Colin A M Semple Youtaro Shibayama Divya M Sivaraman Takahiro Suzuki Suzannah C Szumowski Michihira Tagami Martin S Taylor Chikashi Terao Malte Thodberg Supat Thongjuea Vidisha Tripathi Igor Ulitsky Roberto Verardo Ilya E Vorontsov Chinatsu Yamamoto Robert S Young J Kenneth Baillie Alistair R R Forrest Roderic Guigó Michael M Hoffman Chung Chau Hon Takeya Kasukawa Sakari Kauppinen Juha Kere Boris Lenhard Claudio Schneider Harukazu Suzuki Ken Yagi Michiel J L de Hoon Jay W Shin Piero Carninci

Genome Res 2020 07 27;30(7):1060-1072. Epub 2020 Jul 27.

RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.

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July 2020

Comparative transcriptomics of primary cells in vertebrates.

Authors:
Tanvir Alam Saumya Agrawal Jessica Severin Robert S Young Robin Andersson Erik Arner Akira Hasegawa Marina Lizio Jordan A Ramilowski Imad Abugessaisa Yuri Ishizu Shohei Noma Hiroshi Tarui Martin S Taylor Timo Lassmann Masayoshi Itoh Takeya Kasukawa Hideya Kawaji Luigi Marchionni Guojun Sheng Alistair R R Forrest Levon M Khachigian Yoshihide Hayashizaki Piero Carninci Michiel J L de Hoon

Genome Res 2020 Jul 27;30(7):951-961. Epub 2020 Jul 27.

RIKEN Center for Integrative Medical Sciences, Yokohama 230-0045, Japan.

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July 2020

Influenza Vaccination and COVID19 Mortality in the USA.

Authors:
Claudio Zanettini Mohamed Omar Wikum Dinalankara Eddie Luidy Imada Elizabeth Colantuoni Giovanni Parmigiani Luigi Marchionni

medRxiv 2020 Jun 26. Epub 2020 Jun 26.

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June 2020

Correction to: Differential gene methylation and expression of HOX transcription factor family in orbitofacial neurofibroma.

Authors:
Antje Arnold Eddie Luidy Imada M Lisa Zhang Deepak P Edward Luigi Marchionni Fausto J Rodriguez

Acta Neuropathol Commun 2020 05 14;8(1):69. Epub 2020 May 14.

Departments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States.

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May 2020

Differential gene methylation and expression of HOX transcription factor family in orbitofacial neurofibroma.

Authors:
Antje Arnold Eddie Luidy Imada M Lisa Zhang Deepak P Edward Luigi Marchionni Fausto J Rodriguez

Acta Neuropathol Commun 2020 05 4;8(1):62. Epub 2020 May 4.

Departments of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, United States.

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May 2020

Recounting the FANTOM CAGE-Associated Transcriptome.

Authors:
Eddie Luidy Imada Diego Fernando Sanchez Leonardo Collado-Torres Christopher Wilks Tejasvi Matam Wikum Dinalankara Aleksey Stupnikov Francisco Lobo-Pereira Chi-Wai Yip Kayoko Yasuzawa Naoto Kondo Masayoshi Itoh Harukazu Suzuki Takeya Kasukawa Chung-Chau Hon Michiel J L de Hoon Jay W Shin Piero Carninci Andrew E Jaffe Jeffrey T Leek Alexander Favorov Gloria R Franco Ben Langmead Luigi Marchionni

Genome Res 2020 Jul 20;30(7):1073-1081. Epub 2020 Feb 20.

Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21827, USA.

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July 2020

Look for methods, not conclusions.

Authors:
Roberto Bassi Enrico M Bucci Raffaele A Calogero Piero Carninci Gennaro Ciliberto Pellegrino Conte Michele De Luca Gilberto Corbellini Antonio Giordano Luigi Marchionni Giacomina Massaro Giordano Angelo Parini Gianluca Sbardella

Cell Death Dis 2019 12 5;10(12):931. Epub 2019 Dec 5.

Department of Pharmacy, University of Salerno, Fisciano, I-84084, Italy.

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December 2019

Combined extracts of Echinacea angustifolia DC. and Zingiber officinale Roscoe in softgel capsules: Pharmacokinetics and immunomodulatory effects assessed by gene expression profiling.

Authors:
Stefano Dall'Acqua Iztok Grabnar Roberto Verardo Enio Klaric Luigi Marchionni Eddie Luidy-Imada Stefania Sut Chiara Agostinis Roberta Bulla Beatrice Perissutti Dario Voinovich

Phytomedicine 2019 Dec 16;65:153090. Epub 2019 Sep 16.

Department of Chemical and Pharmaceutical Sciences, University of Trieste, P.le Europa 1, 34127 Trieste, Italy. Electronic address:

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December 2019

Loss with Negative Status is Associated with Lethal Disease after Radical Prostatectomy.

Authors:
Nora M Haney Farzana A Faisal Jiayun Lu Liana B Guedes Victor E Reuter Howard I Scher James A Eastham Luigi Marchionni Corinne Joshu Anuradha Gopalan Tamara L Lotan

J Urol 2020 02 10;203(2):344-350. Epub 2019 Sep 10.

Department of Urology, Johns Hopkins University School of Medicine, Baltimore, Maryland.

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February 2020

CDK12 inactivation across solid tumors: an actionable genetic subtype.

Authors:
Catherine H Marshall Eddie L Imada Zhuojun Tang Luigi Marchionni Emmanuel S Antonarakis

Oncoscience 2019 May 10;6(5-6):312-316. Epub 2019 May 10.

Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.

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May 2019

Variant, Immune Signatures, DNA Methylation, and Social Determinants Linked to Survival Racial Disparities in Head and Neck Cancer Patients.

Authors:
Rafael Guerrero-Preston Fahcina Lawson Sebastian Rodriguez-Torres Maartje G Noordhuis Francesca Pirini Laura Manuel Blanca L Valle Tal Hadar Bianca Rivera Oluwasina Folawiyo Adriana Baez Luigi Marchionni Wayne M Koch William H Westra Young J Kim James R Eshleman David Sidransky

Cancer Prev Res (Phila) 2019 04 18;12(4):255-270. Epub 2019 Feb 18.

Department of Otolaryngology and Head and Neck Surgery, Johns Hopkins University, School of Medicine, Baltimore, Maryland.

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April 2019

Ezrin Promotes Stem Cell Properties in Pancreatic Ductal Adenocarcinoma.

Authors:
Vesselin R Penchev Yu-Tai Chang Asma Begum Theodore Ewachiw Christian Gocke Joey Li Ross H McMillan Qiuju Wang Robert Anders Luigi Marchionni Anirban Maitra Aykut Uren Zeshaan Rasheed William Matsui

Mol Cancer Res 2019 04 17;17(4):929-936. Epub 2019 Jan 17.

Department of Oncology, Sydney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.

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April 2019

PDCD4 Is an Androgen-Repressed Tumor Suppressor that Regulates Prostate Cancer Growth and Castration Resistance.

Authors:
Kenji Zennami Su Mi Choi Ross Liao Ying Li Wikum Dinalankara Luigi Marchionni Fatema H Rafiqi Akira Kurozumi Koji Hatano Shawn E Lupold

Mol Cancer Res 2019 02 5;17(2):618-627. Epub 2018 Dec 5.

Department of Urology, The James Buchanan Brady Urologic Institute, Johns Hopkins School of Medicine, Baltimore, Maryland.

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February 2019

Genetic Analysis of Small Well-differentiated Pancreatic Neuroendocrine Tumors Identifies Subgroups With Differing Risks of Liver Metastases.

Authors:
Antonio Pea Jun Yu Luigi Marchionni Michael Noe Claudio Luchini Alessandra Pulvirenti Roeland F de Wilde Lodewijk A Brosens Neda Rezaee Ammar Javed Peter Chianchiano Stefano Gobbo Paolo Regi Roberto Salvia Claudio Bassi Jin He Matthew J Weiss John L Cameron G Johan A Offerhaus Ralph H Hruban Rita T Lawlor Aldo Scarpa Christopher M Heaphy Laura D Wood Christopher L Wolfgang

Ann Surg 2020 03;271(3):566-573

Department of Surgery, The Sol Goldman Pancreatic Cancer Research Center, The Johns Hopkins University School of Medicine, Baltimore, MD.

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March 2020

Hypomethylation, endogenous retrovirus expression, and interferon signaling in testicular germ cell tumors.

Authors:
Michael C Haffner Diana Taheri Eddie Luidy-Imada Doreen N Palsgrove Marie-Lisa Eich George J Netto Andres Matoso Thomas R Nirschl Qizhi Zheng Jessica L Hicks William G Nelson Angelo M De Marzo Luigi Marchionni Charles G Drake Srinivasan Yegnasubramanian

Proc Natl Acad Sci U S A 2018 09 4;115(37):E8580-E8582. Epub 2018 Sep 4.

Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD 21218;

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September 2018

Hedgehog/GLI1 activation leads to leukemic transformation of myelodysplastic syndrome in vivo and GLI1 inhibition results in antitumor activity.

Authors:
Bonnie W Lau Kyounghee Huh Rafael Madero-Marroquin Federico De Marchi Yiting Lim Qiuju Wang Francisco Lobo Luigi Marchionni Douglas B Smith Amy DeZern Mark J Levis Peter D Aplan William Matsui Lukasz P Gondek

Oncogene 2019 01 31;38(5):687-698. Epub 2018 Aug 31.

The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, 21287, USA.

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January 2019

Epigenetically regulated PAX6 drives cancer cells toward a stem-like state via GLI-SOX2 signaling axis in lung adenocarcinoma.

Authors:
Akira Ooki Wikum Dinalankara Luigi Marchionni Jun-Chieh J Tsay Chandra Goparaju Zahra Maleki William N Rom Harvey I Pass Mohammad O Hoque

Oncogene 2018 11 6;37(45):5967-5981. Epub 2018 Jul 6.

Department of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, MD, 21231, USA.

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November 2018