Lori Phillips

Lori Phillips

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Lori Phillips

Lori Phillips

Publications by authors named "Lori Phillips"

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Web services for data warehouses: OMOP and PCORnet on i2b2.

J Am Med Inform Assoc 2018 10;25(10):1331-1338

Research Information Science and Computing, Partners Healthcare, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1093/jamia/ocy093DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6188504PMC
October 2018

Primer selection influences abundance estimates of ammonia oxidizing archaea in coastal marine sediments.

Mar Environ Res 2018 Sep 4;140:90-95. Epub 2018 Jun 4.

La Trobe University, AgriBio Centre for AgriBiosciences, 5 Ring Road, Bundoora, Australia; Department of Economic Development, Jobs, Transport and Resources, AgriBio, Centre for AgriBiosciences, 5 Ring Road, Bundoora, Australia.

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http://dx.doi.org/10.1016/j.marenvres.2018.06.001DOI Listing
September 2018

Combining clinical and genomics queries using i2b2 - Three methods.

PLoS One 2017 7;12(4):e0172187. Epub 2017 Apr 7.

Department of Biomedical Informatics, Harvard Medical School, Boston, Massachusetts, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0172187PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5384666PMC
September 2017

Taking advantage of continuity of care documents to populate a research repository.

J Am Med Inform Assoc 2015 Mar 28;22(2):370-9. Epub 2014 Oct 28.

Partners Healthcare, Boston, Massachusetts, USA Harvard Medical School, Boston, Massachusetts, USA Massachusetts General Hospital, Boston, Massachusetts, USA.

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http://jamia.oxfordjournals.org/content/jaminfo/22/2/370.ful
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http://jamia.oxfordjournals.org/cgi/doi/10.1136/amiajnl-2014
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http://dx.doi.org/10.1136/amiajnl-2014-003040DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6080729PMC
March 2015

A pilot study using next-generation sequencing in advanced cancers: feasibility and challenges.

PLoS One 2013 30;8(10):e76438. Epub 2013 Oct 30.

Virginia G. Piper Cancer Center Clinical Trials at Scottsdale Healthcare (VGPCC), Scottsdale, Arizona, United States of America ; The Translational Genomics Research Institute, Phoenix, Arizona, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0076438PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3813699PMC
August 2014

Ectomycorrhizal fungi contribute to soil organic matter cycling in sub-boreal forests.

ISME J 2014 Mar 31;8(3):699-713. Epub 2013 Oct 31.

Department of Biology, University of British Columbia, Kelowna, British Columbia, Canada.

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http://dx.doi.org/10.1038/ismej.2013.195DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3930324PMC
March 2014

Simultaneous characterization of somatic events and HPV-18 integration in a metastatic cervical carcinoma patient using DNA and RNA sequencing.

Int J Gynecol Cancer 2014 Feb;24(2):329-38

*Translational Genomics Research Institute; †Comprehensive Cancer Care, St Joseph's Hospital and Medical Center, Phoenix; ‡Mayo Clinic, Scottsdale; §Department of Obstetrics and Gynecology, St Joseph's Hospital and Medical Center, and ∥Division of Gynecologic Oncology, Creighton University School of Medicine, St Joseph's Hospital and Medical Center, University of Arizona Cancer Center, Phoenix, AZ.

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http://dx.doi.org/10.1097/IGC.0000000000000049DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3921261PMC
February 2014

Long insert whole genome sequencing for copy number variant and translocation detection.

Nucleic Acids Res 2014 Jan 25;42(2):e8. Epub 2013 Sep 25.

Integrated Cancer Genomics Division, Translational Genomics Research Institute, Phoenix, AZ, 85004, USA, Neurogenomics Division, Translational Genomics Research Institute, Phoenix, AZ, 85004, USA and Cancer Treatment Centers of America, Medical Oncology, Goodyear, AZ, 85338, USA.

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http://dx.doi.org/10.1093/nar/gkt865DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3902897PMC
January 2014

Natural killer cell-activating receptor NKG2D mediates innate immune targeting of allogeneic neural progenitor cell grafts.

Stem Cells 2013 Sep;31(9):1829-39

Program in Immunology Stanford University School of Medicine University of Colorado, Boulder, Colorado, USA.

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http://dx.doi.org/10.1002/stem.1422DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4199832PMC
September 2013

Fungal endophytes of the obligate parasitic dwarf mistletoe Arceuthobium americanum (Santalaceae) act antagonistically in vitro against the native fungal pathogen Cladosporium (Davidiellaceae) of their host.

Am J Bot 2012 Dec 28;99(12):2027-34. Epub 2012 Nov 28.

Department of Biological Sciences, Thompson Rivers University, 900 McGill Road, Kamloops, British Columbia, Canada.

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http://dx.doi.org/10.3732/ajb.1200189DOI Listing
December 2012

Nursing sabbatical in the acute care hospital setting: a cost-benefit analysis.

J Nurs Adm 2012 Jun;42(6):340-4

College of Nursing and Health Professions, University of Southern Indiana, Evansville, IN, USA.

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http://dx.doi.org/10.1097/NNA.0b013e318257390fDOI Listing
June 2012

Nursing sabbatical in the acute care setting: what is the evidence?

Nurs Forum 2011 Jul-Sep;46(3):195-204

University of Southern Indiana, College of Nursing and Health Professions, Evansville IN 47712, USA.

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http://dx.doi.org/10.1111/j.1744-6198.2011.00225.xDOI Listing
December 2011

Shifts in root-associated microbial communities of Typha latifolia growing in naphthenic acids and relationship to plant health.

Int J Phytoremediation 2010 Oct-Dec;12(8):745-60

Department of Soil Science, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.

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http://dx.doi.org/10.1080/15226510903535106DOI Listing
March 2011

MHC mismatch inhibits neurogenesis and neuron maturation in stem cell allografts.

PLoS One 2011 Mar 30;6(3):e14787. Epub 2011 Mar 30.

Department of Neurosurgery, Stanford Institute for Stem Cell Biology and Regenerative Medicine, Stanford, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0014787PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3068158PMC
March 2011

Showcasing differences between quality improvement, evidence-based practice, and research.

J Contin Educ Nurs 2011 Feb 6;42(2):57-68; quiz 69-70. Epub 2010 Jul 6.

University of Southern Indiana, College of Nursing and Health Professions, Evansville, IN 47712, USA.

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http://www.slackinc.com/doi/resolver.asp?doi=10.3928/0022012
Publisher Site
http://dx.doi.org/10.3928/00220124-20100701-01DOI Listing
February 2011

Toll-like receptor 4 contributes to small intestine allograft rejection.

Transplantation 2010 Dec;90(12):1272-7

Department of Surgery/Division of Transplantation, Stanford University School of Medicine, Stanford, CA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3799863PMC
http://dx.doi.org/10.1097/tp.0b013e3181fdda0dDOI Listing
December 2010

Blocking angiotensin-converting enzyme induces potent regulatory T cells and modulates TH1- and TH17-mediated autoimmunity.

Proc Natl Acad Sci U S A 2009 Sep 19;106(35):14948-53. Epub 2009 Aug 19.

Department of Neurology and Neurological Sciences, Beckman Center for Molecular Medicine, Stanford University, Stanford, CA 94305, USA.

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http://dx.doi.org/10.1073/pnas.0903958106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2736463PMC
September 2009

Integrating outside modules into the i2b2 architecture.

AMIA Annu Symp Proc 2008 Nov 6:1054. Epub 2008 Nov 6.

Partners Healthcare Inc., Boston, MA, USA.

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November 2008

Improving patient experience for coronary angioplasty.

Nurs Times 2008 Apr 15-21;104(15):26

Cardiac Care Unit, Queen Elizabeth Hospital NHS Trust, Woolwich, London.

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June 2008

Using the i2b2 hive for clinical discovery: an example.

AMIA Annu Symp Proc 2007 Oct 11:959. Epub 2007 Oct 11.

Laboratory of Computer Science, Massachusetts General Hospital, Boston, MA.

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October 2007