Publications by authors named "Liudmila Sergeevna Mainzer"

6Publications

Health disparities research is enabled by data diversity but requires much tighter integration of collaborative efforts.

Authors:
Jean-Baptiste Cazier Liudmila Sergeevna Mainzer Weihao Ge Justina Žurauskienė Zeynep Madak-Erdogan

J Glob Health 2020 Dec;10(2):020351

Carl R. Woose Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.

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December 2020

Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience.

Authors:
Azza E Ahmed Phelelani T Mpangase Sumir Panji Shakuntala Baichoo Yassine Souilmi Faisal M Fadlelmola Mustafa Alghali Shaun Aron Hocine Bendou Eugene De Beste Mamana Mbiyavanga Oussema Souiai Long Yi Jennie Zermeno Don Armstrong Brian D O'Connor Liudmila Sergeevna Mainzer Michael R Crusoe Ayton Meintjes Peter Van Heusden Gerrit Botha Fourie Joubert C Victor Jongeneel Scott Hazelhurst Nicola Mulder

AAS Open Res 2018 7;1. Epub 2019 Aug 7.

Computational Biology Division, Integrative Medical Biosciences, University of Cape Town, Cape Town, South Africa.

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August 2019

Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics.

Authors:
Shakuntala Baichoo Yassine Souilmi Sumir Panji Gerrit Botha Ayton Meintjes Scott Hazelhurst Hocine Bendou Eugene de Beste Phelelani T Mpangase Oussema Souiai Mustafa Alghali Long Yi Brian D O'Connor Michael Crusoe Don Armstrong Shaun Aron Fourie Joubert Azza E Ahmed Mamana Mbiyavanga Peter van Heusden Lerato E Magosi Jennie Zermeno Liudmila Sergeevna Mainzer Faisal M Fadlelmola C Victor Jongeneel Nicola Mulder

BMC Bioinformatics 2018 Nov 29;19(1):457. Epub 2018 Nov 29.

Computational Biology Division, Department of Integrative Medical Biosciences, IDM, University of Cape Town, Cape Town, South Africa.

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November 2018

An assessment of true and false positive detection rates of stepwise epistatic model selection as a function of sample size and number of markers.

Authors:
Angela H Chen Weihao Ge William Metcalf Eric Jakobsson Liudmila Sergeevna Mainzer Alexander E Lipka

Heredity (Edinb) 2019 05 15;122(5):660-671. Epub 2018 Nov 15.

Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.

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May 2019

Identification of missing variants by combining multiple analytic pipelines.

Authors:
Yingxue Ren Joseph S Reddy Cyril Pottier Vivekananda Sarangi Shulan Tian Jason P Sinnwell Shannon K McDonnell Joanna M Biernacka Minerva M Carrasquillo Owen A Ross Nilüfer Ertekin-Taner Rosa Rademakers Matthew Hudson Liudmila Sergeevna Mainzer Yan W Asmann

BMC Bioinformatics 2018 04 16;19(1):139. Epub 2018 Apr 16.

Department of Health Sciences Research, Mayo Clinic, Jacksonville, FL, 32224, USA.

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April 2018

Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network.

Authors:
C Victor Jongeneel Ovokeraye Achinike-Oduaran Ezekiel Adebiyi Marion Adebiyi Seun Adeyemi Bola Akanle Shaun Aron Efejiro Ashano Hocine Bendou Gerrit Botha Emile Chimusa Ananyo Choudhury Ravikiran Donthu Jenny Drnevich Oluwadamila Falola Christopher J Fields Scott Hazelhurst Liesl Hendry Itunuoluwa Isewon Radhika S Khetani Judit Kumuthini Magambo Phillip Kimuda Lerato Magosi Liudmila Sergeevna Mainzer Suresh Maslamoney Mamana Mbiyavanga Ayton Meintjes Danny Mugutso Phelelani Mpangase Richard Munthali Victoria Nembaware Andrew Ndhlovu Trust Odia Adaobi Okafor Olaleye Oladipo Sumir Panji Venesa Pillay Gloria Rendon Dhriti Sengupta Nicola Mulder

PLoS Comput Biol 2017 Jun 1;13(6):e1005419. Epub 2017 Jun 1.

Computational Biology Division, Department of Integrative Biomedical Sciences, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, South Africa.

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June 2017