Lishuang Shen

Lishuang Shen

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Lishuang Shen

Lishuang Shen

Publications by authors named "Lishuang Shen"

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24Publications

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A semiautomated whole-exome sequencing workflow leads to increased diagnostic yield and identification of novel candidate variants.

Cold Spring Harb Mol Case Stud 2019 04 1;5(2). Epub 2019 Apr 1.

Center for Personalized Medicine, Department of Pathology and Laboratory Medicine, Children's Hospital Los Angeles, Los Angeles, California 90027, USA.

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http://dx.doi.org/10.1101/mcs.a003756DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6549575PMC
April 2019

MSeqDR mvTool: A mitochondrial DNA Web and API resource for comprehensive variant annotation, universal nomenclature collation, and reference genome conversion.

Hum Mutat 2018 06 6;39(6):806-810. Epub 2018 Apr 6.

Center for Personalized Medicine, Department of Pathology & Laboratory Medicine, Children's Hospital Los Angeles, Los Angeles, California.

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http://dx.doi.org/10.1002/humu.23422DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5992054PMC
June 2018

Inherited germline ATRX mutation in two brothers with ATR-X syndrome and osteosarcoma.

Am J Med Genet A 2017 May 28;173(5):1390-1395. Epub 2017 Mar 28.

Children's Center for Cancer and Blood Diseases, Children's Hospital Los Angeles, Los Angeles, California.

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http://doi.wiley.com/10.1002/ajmg.a.38184
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http://dx.doi.org/10.1002/ajmg.a.38184DOI Listing
May 2017

genetic variants and sarcoidosis-associated uveitis.

Am J Ophthalmol Case Rep 2016 Oct 1;3:39-42. Epub 2016 Jun 1.

Department of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, MA, USA.

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http://dx.doi.org/10.1016/j.ajoc.2016.05.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5757392PMC
October 2016

The Chromatin Remodeling Component Arid1a Is a Suppressor of Spontaneous Mammary Tumors in Mice.

Genetics 2016 08 8;203(4):1601-11. Epub 2016 Jun 8.

Department of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York 14853

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http://dx.doi.org/10.1534/genetics.115.184879DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4981264PMC
August 2016

From case studies to community knowledge base: MSeqDR provides a platform for the curation and genomic analysis of mitochondrial diseases.

Cold Spring Harb Mol Case Stud 2016 May;2(3):a001065

Center for Personalized Medicine, Children's Hospital Los Angeles, Los Angeles, California 90027, USA.

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http://dx.doi.org/10.1101/mcs.a001065DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4853518PMC
May 2016

Bone marrow transcriptome and epigenome profiles of equine common variable immunodeficiency patients unveil block of B lymphocyte differentiation.

Clin Immunol 2015 Oct 16;160(2):261-76. Epub 2015 May 16.

Equine Immunology Laboratory, Department of Clinical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, NY 14853, USA. Electronic address:

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http://dx.doi.org/10.1016/j.clim.2015.05.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4581901PMC
October 2015

Phy-Mer: a novel alignment-free and reference-independent mitochondrial haplogroup classifier.

Bioinformatics 2015 Apr 12;31(8):1310-2. Epub 2014 Dec 12.

Department of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, MA, USA, Center for Biomedical Informaticsand Center for Mitochondrial and Epigenomic Medicine, The Children's Hospital of Philadelphia, Philadelphia, PA, USA, Department of Clinical Genetics, Maastricht University Medical Centre, The Netherlands, Department of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA, Division of Human Genetics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA and Department of Forensic Molecular Biology, Erasmus MC, University Medical Center Rotterdam, Rotterdam, The Netherlands.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btu825DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4393525PMC
April 2015

A-MYB (MYBL1) transcription factor is a master regulator of male meiosis.

Development 2011 Aug;138(15):3319-30

Cornell University College of Veterinary Medicine, Department of Biomedical Sciences, Center for Vertebrate Genomics, Ithaca, NY 14850, USA.

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http://dx.doi.org/10.1242/dev.067645DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3133921PMC
August 2011

BarleyBase/PLEXdb.

Methods Mol Biol 2007 ;406:347-63

Corn Insects and Crop Genetics Research, USDA-ARS and Department of Plant Pathology and Center for Plant Responses to Environmental Stresses, Iowa State University, Ames, IA, USA.

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http://dx.doi.org/10.1007/978-1-59745-535-0_17DOI Listing
January 2009

BarleyExpress: a web-based submission tool for enriched microarray database annotations.

Bioinformatics 2005 Feb 3;21(3):399-401. Epub 2004 Sep 3.

Electrical and Computer Engineering Department, Iowa State University, Ames, IA 50011-3060, USA.

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http://dx.doi.org/10.1093/bioinformatics/bti002DOI Listing
February 2005

BarleyBase--an expression profiling database for plant genomics.

Nucleic Acids Res 2005 Jan;33(Database issue):D614-8

Virtual Reality Applications Center, USDA-ARS, Iowa State University, Ames, IA 50011, USA.

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http://dx.doi.org/10.1093/nar/gki123DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC540077PMC
January 2005