Lijia Ma

Lijia Ma

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Lijia Ma

Lijia Ma

Publications by authors named "Lijia Ma"

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Culprit lesion morphology in young patients with ST-segment elevated myocardial infarction: A clinical, angiographic and optical coherence tomography study.

Atherosclerosis 2019 Oct 22;289:94-100. Epub 2019 Aug 22.

Department of Cardiology, The 2nd Affiliated Hospital of Harbin Medical University; The Key Laboratory of Myocardial Ischemia, Chinese Ministry of Education, Harbin, China. Electronic address:

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http://dx.doi.org/10.1016/j.atherosclerosis.2019.08.011DOI Listing
October 2019

Reliable Link Inference for Network Data With Community Structures.

IEEE Trans Cybern 2019 Sep 30;49(9):3347-3361. Epub 2018 Aug 30.

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http://dx.doi.org/10.1109/TCYB.2018.2860284DOI Listing
September 2019

A Global Network Alignment Method Using Discrete Particle Swarm Optimization.

IEEE/ACM Trans Comput Biol Bioinform 2018 May-Jun;15(3):705-718. Epub 2016 Oct 19.

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http://dx.doi.org/10.1109/TCBB.2016.2618380DOI Listing
May 2019

Mettl3-mediated mRNA mA methylation promotes dendritic cell activation.

Nat Commun 2019 04 23;10(1):1898. Epub 2019 Apr 23.

Department of Immunology & Center for Immunotherapy, Institute of Basic Medical Sciences, Peking Union Medical College, Chinese Academy of Medical Sciences, 100005, Beijing, China.

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http://dx.doi.org/10.1038/s41467-019-09903-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6478715PMC
April 2019

Single base resolution mapping of 2'-O-methylation sites in human mRNA and in 3' terminal ends of small RNAs.

Methods 2019 03 22;156:85-90. Epub 2018 Nov 22.

Department of Chemistry and Institute for Biophysical Dynamics, Howard Hughes Medical Institute, The University of Chicago, Chicago, IL 60637, USA; Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL 60637, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ymeth.2018.11.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6397781PMC
March 2019

Fibroblast growth factor 19 improves cardiac function and mitochondrial energy homoeostasis in the diabetic heart.

Biochem Biophys Res Commun 2018 10 20;505(1):242-248. Epub 2018 Sep 20.

Department of Pharmacology (The State-Province Key Laboratories of Biomedicine Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), College of Pharmacy, Harbin Medical University, China. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S0006291X183196
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http://dx.doi.org/10.1016/j.bbrc.2018.09.046DOI Listing
October 2018

EROSION Study (Effective Anti-Thrombotic Therapy Without Stenting: Intravascular Optical Coherence Tomography-Based Management in Plaque Erosion): A 1-Year Follow-Up Report.

Circ Cardiovasc Interv 2017 Dec;10(12)

From the Department of Cardiology, Second Affiliated Hospital of Harbin Medical University, Key Laboratory of Myocardial Ischemia, China (L.X., H.J., L.M., S.H., C.W., Y.Z., L.L., M.X., H.L., J.H., S.Z., B.Y.); Cardiology Division (L.X., E.Y., T.S., K.B., I.-K.J.) and Biostatistics Center (H.L.), Massachusetts General Hospital, Harvard Medical School, Boston; and Division of Cardiology, Department of Internal Medicine, Kyung Hee University Hospital, Seoul, Republic of Korea (I.-K.J.).

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http://dx.doi.org/10.1161/CIRCINTERVENTIONS.117.005860DOI Listing
December 2017

Effective anti-thrombotic therapy without stenting: intravascular optical coherence tomography-based management in plaque erosion (the EROSION study).

Eur Heart J 2017 Mar;38(11):792-800

Cardiology Division, Massachusetts General Hospital, Harvard Medical School, 55 Fruit St., GRB 800, Boston, MA 02114, USA.

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http://dx.doi.org/10.1093/eurheartj/ehw381DOI Listing
March 2017

Evolution of transcript modification by -methyladenosine in primates.

Genome Res 2017 03 4;27(3):385-392. Epub 2017 Jan 4.

Institute for Genomics and Systems Biology, The University of Chicago, Chicago, Illinois 60637, USA.

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http://dx.doi.org/10.1101/gr.212563.116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5340966PMC
March 2017

Global Biological Network Alignment by Using Efficient Memetic Algorithm.

IEEE/ACM Trans Comput Biol Bioinform 2016 11 23;13(6):1117-1129. Epub 2015 Dec 23.

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http://dx.doi.org/10.1109/TCBB.2015.2511741DOI Listing
November 2016

Association between cholesterol crystals and culprit lesion vulnerability in patients with acute coronary syndrome: An optical coherence tomography study.

Atherosclerosis 2016 Apr 8;247:111-7. Epub 2016 Feb 8.

Department of Cardiology, The 2nd Affiliated Hospital of Harbin Medical University, The Key Laboratory of Myocardial Ischemia, Chinese Ministry of Education, Harbin, China. Electronic address:

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http://dx.doi.org/10.1016/j.atherosclerosis.2016.02.010DOI Listing
April 2016

Comparison of optical coherence tomography and intravascular ultrasound for evaluation of coronary lipid-rich atherosclerotic plaque progression and regression.

Eur Heart J Cardiovasc Imaging 2015 Dec 24;16(12):1374-80. Epub 2015 Apr 24.

Department of Cardiology, Key Laboratories of Education Ministry for Myocardial Ischemia Mechanism and Treatment, 2nd Affiliated Hospital of Harbin Medical University, Harbin 150086, China

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http://ehjcimaging.oxfordjournals.org/content/ejechocard/ear
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http://ehjcimaging.oxfordjournals.org/cgi/doi/10.1093/ehjci/
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http://dx.doi.org/10.1093/ehjci/jev104DOI Listing
December 2015

Ginsenoside Rb3 protects cardiomyocytes against ischemia-reperfusion injury via the inhibition of JNK-mediated NF-κB pathway: a mouse cardiomyocyte model.

PLoS One 2014 1;9(8):e103628. Epub 2014 Aug 1.

Department of Cardiology, Second Affiliated Hospital of Harbin Medical University, Key Laboratory of Myocardial Ischemia Mechanism and Treatment Ministry of Education, Harbin, Heilongjiang, China.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0103628PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4118887PMC
April 2015

Enhancing robustness of coupled networks under targeted recoveries.

Sci Rep 2015 Feb 13;5:8439. Epub 2015 Feb 13.

Key Lab of Intelligent Perception and Image Understanding of Ministry of Education, International Research Center for Intelligent Perception and Computation, Xidian University, Xi'an, Shaanxi Province 710071, China.

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http://dx.doi.org/10.1038/srep08439DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4327128PMC
February 2015

Discrete particle swarm optimization for identifying community structures in signed social networks.

Neural Netw 2014 Oct 13;58:4-13. Epub 2014 May 13.

Key Laboratory of Intelligent Perception and Image Understanding of Ministry of Education, International Research Center for Intelligent Perception and Computation, Xidian University, Xi'an, Shaanxi Province 710071, China.

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http://dx.doi.org/10.1016/j.neunet.2014.04.006DOI Listing
October 2014

Su(H)-mediated repression positions gene boundaries along the dorsal-ventral axis of Drosophila embryos.

Dev Cell 2014 Oct;31(1):100-13

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA. Electronic address:

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http://dx.doi.org/10.1016/j.devcel.2014.08.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4201238PMC
October 2014

Transcription factor networks in Drosophila melanogaster.

Cell Rep 2014 Sep 18;8(6):2031-2043. Epub 2014 Sep 18.

Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA; Biogen Idec, Inc., Cambridge, MA 02142, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2014.08.038DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4403667PMC
September 2014

Evolution of H3K27me3-marked chromatin is linked to gene expression evolution and to patterns of gene duplication and diversification.

Genome Res 2014 Jul;24(7):1115-24

Department of Ecology and Evolution, University of Chicago, Chicago, Illinois 60637, USA; Institute for Genomics and Systems Biology, University of Chicago and Argonne National Laboratory, Chicago, Illinois 60637, USA; Department of Human Genetics, University of Chicago, Chicago, Illinois 60637, USA;

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http://dx.doi.org/10.1101/gr.162008.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4079967PMC
July 2014

Yorkie promotes transcription by recruiting a histone methyltransferase complex.

Cell Rep 2014 Jul 10;8(2):449-59. Epub 2014 Jul 10.

Howard Hughes Medical Institute, Waksman Institute and Department of Molecular Biology and Biochemistry, Rutgers University, Piscataway, NJ 08854, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2014.06.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4152371PMC
July 2014

Divergent transcriptional regulatory logic at the intersection of tissue growth and developmental patterning.

PLoS Genet 2013 5;9(9):e1003753. Epub 2013 Sep 5.

Department of Biochemistry and Molecular Biophysics, Columbia University, New York, New York, United States of America ; Institute for Genomics and Systems Biology and Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1003753DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3764184PMC
March 2014

Enhancing community integrity of networks against multilevel targeted attacks.

Phys Rev E Stat Nonlin Soft Matter Phys 2013 Aug 20;88(2):022810. Epub 2013 Aug 20.

Key Laboratory of Intelligent Perception and Image Understanding of Ministry of Education, Xidian University, Xi'an, Shaanxi Province 710071, China.

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http://dx.doi.org/10.1103/PhysRevE.88.022810DOI Listing
August 2013

A comprehensive nuclear receptor network for breast cancer cells.

Cell Rep 2013 Feb 31;3(2):538-51. Epub 2013 Jan 31.

Institute of Genomics and Systems Biology, Argonne National Laboratory, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1016/j.celrep.2013.01.004DOI Listing
February 2013

Genome-wide association of Yorkie with chromatin and chromatin-remodeling complexes.

Cell Rep 2013 Feb 8;3(2):309-18. Epub 2013 Feb 8.

Howard Hughes Medical Institute, Waksman Institute, and Department of Molecular Biology and Biochemistry, Rutgers University, Piscataway, NJ 08854, USA.

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http://dx.doi.org/10.1016/j.celrep.2013.01.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3633442PMC
February 2013

Cutting balloon combined with paclitaxel-eluting balloon for treatment of in-stent restenosis.

Arch Cardiovasc Dis 2013 Feb 30;106(2):79-85. Epub 2013 Jan 30.

Department of Cardiology, Second Affiliated Hospital of Harbin Medical University, Key Laboratories of Education, Ministry for Myocardial Ischaemia Mechanism and Treatment, 150086 Harbin, Heilongjiang, China.

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https://linkinghub.elsevier.com/retrieve/pii/S18752136130000
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http://dx.doi.org/10.1016/j.acvd.2012.10.004DOI Listing
February 2013

Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.

Plant J 2012 Aug 5;71(3):378-89. Epub 2012 Jun 5.

State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.

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http://dx.doi.org/10.1111/j.1365-313X.2012.05001.xDOI Listing
August 2012

Identification of ten serum microRNAs from a genome-wide serum microRNA expression profile as novel noninvasive biomarkers for nonsmall cell lung cancer diagnosis.

Int J Cancer 2012 Apr 3;130(7):1620-8. Epub 2011 Aug 3.

Jiangsu Engineering Research Center for microRNA Biology and Biotechnology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, 22 Hankou Road, Nanjing, Jiangsu, China.

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http://dx.doi.org/10.1002/ijc.26177DOI Listing
April 2012

Roles of DCL4 and DCL3b in rice phased small RNA biogenesis.

Plant J 2012 Feb 23;69(3):462-74. Epub 2011 Nov 23.

State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.

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http://dx.doi.org/10.1111/j.1365-313X.2011.04805.xDOI Listing
February 2012

Genome-wide tissue-specific occupancy of the Hox protein Ultrabithorax and Hox cofactor Homothorax in Drosophila.

PLoS One 2011 Apr 5;6(4):e14686. Epub 2011 Apr 5.

Department of Biochemistry and Molecular Biophysics, Columbia University, New York, New York, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0014686PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3071676PMC
April 2011

Identification of functional elements and regulatory circuits by Drosophila modENCODE.

Science 2010 Dec 22;330(6012):1787-97. Epub 2010 Dec 22.

Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.

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http://compbio.mit.edu/publications/46_modENCODE_Science_10.
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http://www.sciencemag.org/cgi/doi/10.1126/science.1198374
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http://dx.doi.org/10.1126/science.1198374DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3192495PMC
December 2010

Development of lipid-rich plaque inside bare metal stent: possible mechanism of late stent thrombosis? An optical coherence tomography study.

Heart 2010 Aug;96(15):1187-90

Department of Cardiology, Key Laboratories of Education Ministry for Myocardial Ischaemia Mechanism and Treatment, Second Affiliated Hospital of Harbin Medical University, Harbin, PR China.

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http://dx.doi.org/10.1136/hrt.2010.194381DOI Listing
August 2010

Single base-resolution methylome of the silkworm reveals a sparse epigenomic map.

Nat Biotechnol 2010 May 2;28(5):516-20. Epub 2010 May 2.

CAS-Max Planck Junior Research Group, State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, The Chinese Academy of Sciences, Kunming, China.

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http://dx.doi.org/10.1038/nbt.1626DOI Listing
May 2010

Identification and characterization of novel amphioxus microRNAs by Solexa sequencing.

Genome Biol 2009 17;10(7):R78. Epub 2009 Jul 17.

Jiangsu Diabetes Center, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Hankou Road, Nanjing, Jiangsu 210093, PR China.

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http://dx.doi.org/10.1186/gb-2009-10-7-r78DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2728532PMC
January 2010

The sequence and de novo assembly of the giant panda genome.

Nature 2010 Jan 13;463(7279):311-7. Epub 2009 Dec 13.

BGI-Shenzhen, Shenzhen 518083, China.

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http://dx.doi.org/10.1038/nature08696DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3951497PMC
January 2010

The YH database: the first Asian diploid genome database.

Nucleic Acids Res 2009 Jan;37(Database issue):D1025-8

Beijing Genomics Institute at Shenzhen 518083, China.

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http://dx.doi.org/10.1093/nar/gkn966DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686535PMC
January 2009

Snap: an integrated SNP annotation platform.

Nucleic Acids Res 2007 Jan 29;35(Database issue):D707-10. Epub 2006 Nov 29.

The Institute of Human Genetics, University of Aarhus, DK-8000 Aarhus C, Denmark.

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http://dx.doi.org/10.1093/nar/gkl969DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1751554PMC
January 2007