Publications by authors named "Lihua Zou"

46Publications

DOT1L-controlled cell-fate determination and transcription elongation are independent of H3K79 methylation.

Proc Natl Acad Sci U S A 2020 Nov 19;117(44):27365-27373. Epub 2020 Oct 19.

Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611;

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.2001075117DOI Listing
November 2020

One-pot process for lactic acid production from wheat straw by an adapted Bacillus coagulans and identification of genes related to hydrolysate-tolerance.

Bioresour Technol 2020 Nov 16;315:123855. Epub 2020 Jul 16.

Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, People's Republic of China. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.biortech.2020.123855DOI Listing
November 2020

Highly effective antibacterial zeolitic imidazolate framework-67/alginate fibers.

Nanotechnology 2020 Sep 28;31(37):375707. Epub 2020 May 28.

School of Textile and Garment, Anhui Polytechnic University, Wuhu, Anhui 241000, People's Republic of China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1088/1361-6528/ab978aDOI Listing
September 2020

Robust ZIF-8/alginate fibers for the durable and highly effective antibacterial textiles.

Colloids Surf B Biointerfaces 2020 Sep 18;193:111127. Epub 2020 May 18.

Key Laboratory of Textile Science & Technology, College of Textiles, Donghua University, Shanghai 201620, China; College of Textiles and Apparel, Quanzhou Normal University, Fujian 362000, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.colsurfb.2020.111127DOI Listing
September 2020

Valorization of Gelidium amansii for dual production of D-galactonic acid and 5-hydroxymethyl-2-furancarboxylic acid by chemo-biological approach.

Microb Cell Fact 2020 May 14;19(1):104. Epub 2020 May 14.

Key Laboratory of Forestry Genetics & Biotechnology (Nanjing Forestry University), Ministry of Education, Nanjing, 210037, People's Republic of China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s12934-020-01357-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7227364PMC
May 2020

Integrating Next-Generation Sequencing with Morphology Improves Prognostic and Biologic Classification of Spitz Neoplasms.

J Invest Dermatol 2020 Aug 29;140(8):1599-1608. Epub 2020 Jan 29.

Department of Dermatology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jid.2019.12.031DOI Listing
August 2020

Promoter demethylation of the asparagine synthetase gene is required for ATF4-dependent adaptation to asparagine depletion.

J Biol Chem 2019 12 28;294(49):18674-18684. Epub 2019 Oct 28.

Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, Indiana 46202

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1074/jbc.RA119.010447DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6901317PMC
December 2019

A versatile Pseudomonas putida KT2440 with new ability: selective oxidation of 5-hydroxymethylfurfural to 5-hydroxymethyl-2-furancarboxylic acid.

Bioprocess Biosyst Eng 2020 Jan 18;43(1):67-73. Epub 2019 Sep 18.

Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, Nanjing Forestry University, Nanjing, 210037, People's Republic of China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00449-019-02205-7DOI Listing
January 2020

Identification of new rice cultivars and resistance loci against rice black-streaked dwarf virus disease through genome-wide association study.

Rice (N Y) 2019 Jul 15;12(1):49. Epub 2019 Jul 15.

Jiangsu Key Laboratory of Crop Genetics and Physiology/ Key Laboratory of Plant Functional Genomics of the Ministry of Education/ Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Agricultural College of Yangzhou University, Yangzhou, 225009, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s12284-019-0310-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6629753PMC
July 2019

Distinct Genomic Features in a Retrospective Cohort of Mucosal, Acral and Vulvovaginal Melanomas.

J Am Acad Dermatol 2019 Jul 12. Epub 2019 Jul 12.

Department of Dermatology, Feinberg School of Medicine, Northwestern University, Chicago, IL; Robert H. Lurie Cancer Center, Feinberg School of Medicine, Northwestern University, Chicago, IL. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jaad.2019.07.017DOI Listing
July 2019

Perioperative Outcomes of Using Different Temperature Management Strategies on Pediatric Patients Undergoing Aortic Arch Surgery: A Single-Center, 8-Year Study.

Front Pediatr 2018 27;6:356. Epub 2018 Nov 27.

Department of Cardiopulmonary Bypass, Chinese Academy of Medical Sciences and Peking Union Medical College Fuwai Hospital, Beijing, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3389/fped.2018.00356DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6277883PMC
November 2018

Simultaneous consumption of cellobiose and xylose by to circumvent glucose repression and identification of its cellobiose-assimilating operons.

Biotechnol Biofuels 2018 1;11:320. Epub 2018 Dec 1.

1Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, Nanjing Forestry University, Nanjing, 210037 People's Republic of China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s13068-018-1323-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6271610PMC
December 2018

TET2 coactivates gene expression through demethylation of enhancers.

Sci Adv 2018 11 7;4(11):eaau6986. Epub 2018 Nov 7.

Simpson Querrey Center for Epigenetics, Northwestern University Feinberg School of Medicine, 320 East Superior Street, Chicago, IL 60611, USA.

View Article

Download full-text PDF

Source
http://advances.sciencemag.org/lookup/doi/10.1126/sciadv.aau
Publisher Site
http://dx.doi.org/10.1126/sciadv.aau6986DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6221537PMC
November 2018

Substitution of artificial colloids for fresh frozen plasma in pediatric cardiopulmonary bypass surgery.

Paediatr Anaesth 2018 10 12;28(10):914-923. Epub 2018 Sep 12.

Department of Cardiopulmonary Bypass, Chinese Academy of Medical Science and Peking Union Medical College, Fuwai Hospital and National Center for Cardiovascular Diseases, Beijing, China.

View Article

Download full-text PDF

Source
http://doi.wiley.com/10.1111/pan.13473
Publisher Site
http://dx.doi.org/10.1111/pan.13473DOI Listing
October 2018

p190 RhoGAP promotes contact inhibition in epithelial cells by repressing YAP activity.

J Cell Biol 2018 09 22;217(9):3183-3201. Epub 2018 Jun 22.

GI Cell Biology Research Laboratory, Boston Children's Hospital and Harvard Medical School, Boston, MA

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1083/jcb.201710058DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6122998PMC
September 2018

Dual Targeting of Oncogenic Activation and Inflammatory Signaling Increases Therapeutic Efficacy in Myeloproliferative Neoplasms.

Cancer Cell 2018 01 14;33(1):29-43.e7. Epub 2017 Dec 14.

Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, 1275 York Avenue, Box 20, New York, NY 10065, USA; Center for Epigenetics Research, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Center for Hematologic Malignancies, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Leukemia Service, Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.ccell.2017.11.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5760343PMC
January 2018

Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas.

Authors:
Daniel J Brat Roel G W Verhaak Kenneth D Aldape W K Alfred Yung Sofie R Salama Lee A D Cooper Esther Rheinbay C Ryan Miller Mark Vitucci Olena Morozova A Gordon Robertson Houtan Noushmehr Peter W Laird Andrew D Cherniack Rehan Akbani Jason T Huse Giovanni Ciriello Laila M Poisson Jill S Barnholtz-Sloan Mitchel S Berger Cameron Brennan Rivka R Colen Howard Colman Adam E Flanders Caterina Giannini Mia Grifford Antonio Iavarone Rajan Jain Isaac Joseph Jaegil Kim Katayoon Kasaian Tom Mikkelsen Bradley A Murray Brian Patrick O'Neill Lior Pachter Donald W Parsons Carrie Sougnez Erik P Sulman Scott R Vandenberg Erwin G Van Meir Andreas von Deimling Hailei Zhang Daniel Crain Kevin Lau David Mallery Scott Morris Joseph Paulauskis Robert Penny Troy Shelton Mark Sherman Peggy Yena Aaron Black Jay Bowen Katie Dicostanzo Julie Gastier-Foster Kristen M Leraas Tara M Lichtenberg Christopher R Pierson Nilsa C Ramirez Cynthia Taylor Stephanie Weaver Lisa Wise Erik Zmuda Tanja Davidsen John A Demchok Greg Eley Martin L Ferguson Carolyn M Hutter Kenna R Mills Shaw Bradley A Ozenberger Margi Sheth Heidi J Sofia Roy Tarnuzzer Zhining Wang Liming Yang Jean Claude Zenklusen Brenda Ayala Julien Baboud Sudha Chudamani Mark A Jensen Jia Liu Todd Pihl Rohini Raman Yunhu Wan Ye Wu Adrian Ally J Todd Auman Miruna Balasundaram Saianand Balu Stephen B Baylin Rameen Beroukhim Moiz S Bootwalla Reanne Bowlby Christopher A Bristow Denise Brooks Yaron Butterfield Rebecca Carlsen Scott Carter Lynda Chin Andy Chu Eric Chuah Kristian Cibulskis Amanda Clarke Simon G Coetzee Noreen Dhalla Tim Fennell Sheila Fisher Stacey Gabriel Gad Getz Richard Gibbs Ranabir Guin Angela Hadjipanayis D Neil Hayes Toshinori Hinoue Katherine Hoadley Robert A Holt Alan P Hoyle Stuart R Jefferys Steven Jones Corbin D Jones Raju Kucherlapati Phillip H Lai Eric Lander Semin Lee Lee Lichtenstein Yussanne Ma Dennis T Maglinte Harshad S Mahadeshwar Marco A Marra Michael Mayo Shaowu Meng Matthew L Meyerson Piotr A Mieczkowski Richard A Moore Lisle E Mose Andrew J Mungall Angeliki Pantazi Michael Parfenov Peter J Park Joel S Parker Charles M Perou Alexei Protopopov Xiaojia Ren Jeffrey Roach Thaís S Sabedot Jacqueline Schein Steven E Schumacher Jonathan G Seidman Sahil Seth Hui Shen Janae V Simons Payal Sipahimalani Matthew G Soloway Xingzhi Song Huandong Sun Barbara Tabak Angela Tam Donghui Tan Jiabin Tang Nina Thiessen Timothy Triche David J Van Den Berg Umadevi Veluvolu Scot Waring Daniel J Weisenberger Matthew D Wilkerson Tina Wong Junyuan Wu Liu Xi Andrew W Xu Lixing Yang Travis I Zack Jianhua Zhang B Arman Aksoy Harindra Arachchi Chris Benz Brady Bernard Daniel Carlin Juok Cho Daniel DiCara Scott Frazer Gregory N Fuller JianJiong Gao Nils Gehlenborg David Haussler David I Heiman Lisa Iype Anders Jacobsen Zhenlin Ju Sol Katzman Hoon Kim Theo Knijnenburg Richard Bailey Kreisberg Michael S Lawrence William Lee Kalle Leinonen Pei Lin Shiyun Ling Wenbin Liu Yingchun Liu Yuexin Liu Yiling Lu Gordon Mills Sam Ng Michael S Noble Evan Paull Arvind Rao Sheila Reynolds Gordon Saksena Zack Sanborn Chris Sander Nikolaus Schultz Yasin Senbabaoglu Ronglai Shen Ilya Shmulevich Rileen Sinha Josh Stuart S Onur Sumer Yichao Sun Natalie Tasman Barry S Taylor Doug Voet Nils Weinhold John N Weinstein Da Yang Kosuke Yoshihara Siyuan Zheng Wei Zhang Lihua Zou Ty Abel Sara Sadeghi Mark L Cohen Jenny Eschbacher Eyas M Hattab Aditya Raghunathan Matthew J Schniederjan Dina Aziz Gene Barnett Wendi Barrett Darell D Bigner Lori Boice Cathy Brewer Chiara Calatozzolo Benito Campos Carlos Gilberto Carlotti Timothy A Chan Lucia Cuppini Erin Curley Stefania Cuzzubbo Karen Devine Francesco DiMeco Rebecca Duell J Bradley Elder Ashley Fehrenbach Gaetano Finocchiaro William Friedman Jordonna Fulop Johanna Gardner Beth Hermes Christel Herold-Mende Christine Jungk Ady Kendler Norman L Lehman Eric Lipp Ouida Liu Randy Mandt Mary McGraw Roger Mclendon Christopher McPherson Luciano Neder Phuong Nguyen Ardene Noss Raffaele Nunziata Quinn T Ostrom Cheryl Palmer Alessandro Perin Bianca Pollo Alexander Potapov Olga Potapova W Kimryn Rathmell Daniil Rotin Lisa Scarpace Cathy Schilero Kelly Senecal Kristen Shimmel Vsevolod Shurkhay Suzanne Sifri Rosy Singh Andrew E Sloan Kathy Smolenski Susan M Staugaitis Ruth Steele Leigh Thorne Daniela P C Tirapelli Andreas Unterberg Mahitha Vallurupalli Yun Wang Ronald Warnick Felicia Williams Yingli Wolinsky Sue Bell Mara Rosenberg Chip Stewart Franklin Huang Jonna L Grimsby Amie J Radenbaugh Jianan Zhang
June 2015

Use of clinical next-generation sequencing to identify melanomas harboring SMARCB1 mutations.

J Cutan Pathol 2015 May 24;42(5):308-17. Epub 2015 Mar 24.

Department of Pathology and Laboratory Medicine, Section of Dermatopathology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/cup.12481DOI Listing
May 2015

The somatic genomic landscape of glioblastoma.

Cell 2013 Oct;155(2):462-77

Human Oncology and Pathogenesis Program, Brain Tumor Center, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA; Department of Neurosurgery, Memorial Sloan-Kettering Cancer Center, Department of Neurological Surgery, Weill Cornell Medical Center, New York, NY 10065, USA. Electronic address:

View Article

Download full-text PDF

Source
https://www.genome.gov/Multimedia/Slides/TCGA2/27_Verhaak.pd
Web Search
http://linkinghub.elsevier.com/retrieve/pii/S009286741301208
Publisher Site
http://dx.doi.org/10.1016/j.cell.2013.09.034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3910500PMC
October 2013

Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia.

N Engl J Med 2013 05 1;368(22):2059-74. Epub 2013 May 1.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1056/NEJMoa1301689DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3767041PMC
May 2013

Regulation of TFEB and V-ATPases by mTORC1.

EMBO J 2011 Jul 29;30(16):3242-58. Epub 2011 Jul 29.

Department of Developmental Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA.

View Article

Download full-text PDF

Source
http://emboj.embopress.org/cgi/doi/10.1038/emboj.2011.257
Publisher Site
http://dx.doi.org/10.1038/emboj.2011.257DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3160667PMC
July 2011

To signal a conjunction of many inputs negative regulation is likely.

Math Biosci 2011 May 15;231(1):69-75. Epub 2011 Feb 15.

Department of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

View Article

Download full-text PDF

Source
https://linkinghub.elsevier.com/retrieve/pii/S00255564110001
Publisher Site
http://dx.doi.org/10.1016/j.mbs.2011.02.001DOI Listing
May 2011

High-throughput ectopic expression screen for tamoxifen resistance identifies an atypical kinase that blocks autophagy.

Proc Natl Acad Sci U S A 2011 Feb 13;108(5):2058-63. Epub 2011 Jan 13.

The Virginia G Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, AZ 85287, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.1018157108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3033257PMC
February 2011

Information flow analysis of interactome networks.

PLoS Comput Biol 2009 Apr 10;5(4):e1000350. Epub 2009 Apr 10.

Whitehead Institute for Biomedical Research, Cambridge, Massachusetts, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1371/journal.pcbi.1000350DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685719PMC
April 2009

Reciprocal effects of STAT5 and STAT3 in breast cancer.

Mol Cancer Res 2009 Jun 2;7(6):966-76. Epub 2009 Jun 2.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02115, USA.

View Article

Download full-text PDF

Source
http://mcr.aacrjournals.org/content/early/2009/05/31/1541-77
Web Search
http://mcr.aacrjournals.org/cgi/doi/10.1158/1541-7786.MCR-08
Publisher Site
http://dx.doi.org/10.1158/1541-7786.MCR-08-0238DOI Listing
June 2009

Systematic analysis of pleiotropy in C. elegans early embryogenesis.

PLoS Comput Biol 2008 Feb 29;4(2):e1000003. Epub 2008 Feb 29.

Department of Statistics, Harvard University, Cambridge, Massachusetts, USA.

View Article

Download full-text PDF

Source
https://dx.plos.org/10.1371/journal.pcbi.1000003
Publisher Site
http://dx.doi.org/10.1371/journal.pcbi.1000003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2265476PMC
February 2008

Importance of dosage standardization for interpreting transcriptomal signature profiles: evidence from studies of xenoestrogens.

Proc Natl Acad Sci U S A 2006 Aug 1;103(32):12033-8. Epub 2006 Aug 1.

Department of Tumor Biology and Molecular Profiling Laboratory, Massachusetts General Hospital Center for Cancer Research, Charlestown, MA 02129, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.0605341103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1525050PMC
August 2006

Toward a global picture of development: lessons from genome-scale analysis in Caenorhabditis elegans embryonic development.

Dev Dyn 2006 Aug;235(8):2009-17

Whitehead Institute, Cambridge, Massachusetts 02142, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/dvdy.20865DOI Listing
August 2006

Reduced pulmonary endothelium-bound angiotensin converting enzyme activity in diabetic rabbits.

Vascul Pharmacol 2004 May-Jun;41(4-5):159-65

Vascular Biology Center, Medical College of Georgia, Augusta, GA 30912-2500, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.vph.2004.08.004DOI Listing
April 2005