Lee Rowen

Lee Rowen

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Lee Rowen

Lee Rowen

Publications by authors named "Lee Rowen"

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The Human Genome Project: big science transforms biology and medicine.

Genome Med 2013 13;5(9):79. Epub 2013 Sep 13.

Institute for Systems Biology, 401 Terry Ave N., Seattle, WA 98109, USA.

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http://dx.doi.org/10.1186/gm483DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4066586PMC
August 2014

An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge.

Authors:
Catherine A Brownstein Alan H Beggs Nils Homer Barry Merriman Timothy W Yu Katherine C Flannery Elizabeth T DeChene Meghan C Towne Sarah K Savage Emily N Price Ingrid A Holm Lovelace J Luquette Elaine Lyon Joseph Majzoub Peter Neupert David McCallie Peter Szolovits Huntington F Willard Nancy J Mendelsohn Renee Temme Richard S Finkel Sabrina W Yum Livija Medne Shamil R Sunyaev Ivan Adzhubey Christopher A Cassa Paul I W de Bakker Hatice Duzkale Piotr Dworzyński William Fairbrother Laurent Francioli Birgit H Funke Monica A Giovanni Robert E Handsaker Kasper Lage Matthew S Lebo Monkol Lek Ignaty Leshchiner Daniel G MacArthur Heather M McLaughlin Michael F Murray Tune H Pers Paz P Polak Soumya Raychaudhuri Heidi L Rehm Rachel Soemedi Nathan O Stitziel Sara Vestecka Jochen Supper Claudia Gugenmus Bernward Klocke Alexander Hahn Max Schubach Mortiz Menzel Saskia Biskup Peter Freisinger Mario Deng Martin Braun Sven Perner Richard J H Smith Janeen L Andorf Jian Huang Kelli Ryckman Val C Sheffield Edwin M Stone Thomas Bair E Ann Black-Ziegelbein Terry A Braun Benjamin Darbro Adam P DeLuca Diana L Kolbe Todd E Scheetz Aiden E Shearer Rama Sompallae Kai Wang Alexander G Bassuk Erik Edens Katherine Mathews Steven A Moore Oleg A Shchelochkov Pamela Trapane Aaron Bossler Colleen A Campbell Jonathan W Heusel Anne Kwitek Tara Maga Karin Panzer Thomas Wassink Douglas Van Daele Hela Azaiez Kevin Booth Nic Meyer Michael M Segal Marc S Williams Gerard Tromp Peter White Donald Corsmeier Sara Fitzgerald-Butt Gail Herman Devon Lamb-Thrush Kim L McBride David Newsom Christopher R Pierson Alexander T Rakowsky Aleš Maver Luca Lovrečić Anja Palandačić Borut Peterlin Ali Torkamani Anna Wedell Mikael Huss Andrey Alexeyenko Jessica M Lindvall Måns Magnusson Daniel Nilsson Henrik Stranneheim Fulya Taylan Christian Gilissen Alexander Hoischen Bregje van Bon Helger Yntema Marcel Nelen Weidong Zhang Jason Sager Lu Zhang Kathryn Blair Deniz Kural Michael Cariaso Greg G Lennon Asif Javed Saloni Agrawal Pauline C Ng Komal S Sandhu Shuba Krishna Vamsi Veeramachaneni Ofer Isakov Eran Halperin Eitan Friedman Noam Shomron Gustavo Glusman Jared C Roach Juan Caballero Hannah C Cox Denise Mauldin Seth A Ament Lee Rowen Daniel R Richards F Anthony San Lucas Manuel L Gonzalez-Garay C Thomas Caskey Yu Bai Ying Huang Fang Fang Yan Zhang Zhengyuan Wang Jorge Barrera Juan M Garcia-Lobo Domingo González-Lamuño Javier Llorca Maria C Rodriguez Ignacio Varela Martin G Reese Francisco M De La Vega Edward Kiruluta Michele Cargill Reece K Hart Jon M Sorenson Gholson J Lyon David A Stevenson Bruce E Bray Barry M Moore Karen Eilbeck Mark Yandell Hongyu Zhao Lin Hou Xiaowei Chen Xiting Yan Mengjie Chen Cong Li Can Yang Murat Gunel Peining Li Yong Kong Austin C Alexander Zayed I Albertyn Kym M Boycott Dennis E Bulman Paul M K Gordon A Micheil Innes Bartha M Knoppers Jacek Majewski Christian R Marshall Jillian S Parboosingh Sarah L Sawyer Mark E Samuels Jeremy Schwartzentruber Isaac S Kohane David M Margulies

Genome Biol 2014 Mar 25;15(3):R53. Epub 2014 Mar 25.

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http://dx.doi.org/10.1186/gb-2014-15-3-r53DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4073084PMC
March 2014

Transcription factor expression dynamics of early T-lymphocyte specification and commitment.

Dev Biol 2009 Jan 5;325(2):444-67. Epub 2008 Nov 5.

Division of Biology 156-29, California Institute of Technology, Pasadena, CA 91125, USA.

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http://dx.doi.org/10.1016/j.ydbio.2008.10.021DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2663971PMC
January 2009

Systems biology at the Institute for Systems Biology.

Brief Funct Genomic Proteomic 2008 Jul 25;7(4):239-48. Epub 2008 Jun 25.

Institute for Systems Biology, Seattle, WA 98103, USA.

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http://dx.doi.org/10.1093/bfgp/eln027DOI Listing
July 2008

Molecular dissection of prethymic progenitor entry into the T lymphocyte developmental pathway.

J Immunol 2007 Jul;179(1):421-38

Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA.

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http://dx.doi.org/10.4049/jimmunol.179.1.421DOI Listing
July 2007

Unusual gene order and organization of the sea urchin hox cluster.

J Exp Zool B Mol Dev Evol 2006 Jan;306(1):45-58

Division of Biology and the Beckman Institute, California Institute of Technology, Pasadena, CA 91125, USA.

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http://dx.doi.org/10.1002/jez.b.21070DOI Listing
January 2006

T1DBase, a community web-based resource for type 1 diabetes research.

Nucleic Acids Res 2005 Jan;33(Database issue):D544-9

Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Cambridge Institute for Medical Research, University of Cambridge, Wellcome Trust/MRC Building, Cambridge CB2 2XY, UK.

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http://dx.doi.org/10.1093/nar/gki095DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC540049PMC
January 2005

An enigmatic fourth runt domain gene in the fugu genome: ancestral gene loss versus accelerated evolution.

BMC Evol Biol 2004 Nov 4;4:43. Epub 2004 Nov 4.

Institute for Systems Biology, 1441 N 34th St,, Seattle, WA 98103, USA.

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http://dx.doi.org/10.1186/1471-2148-4-43DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC533870PMC
November 2004

The organization and evolution of the dipteran and hymenopteran Down syndrome cell adhesion molecule (Dscam) genes.

RNA 2004 Oct;10(10):1499-506

Department of Genetics and Developmental Biology, University of Connecticut Health Center, 263 Farmington Avenue, Farmington, CT 06030-3301, USA.

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http://www.rnajournal.org/cgi/doi/10.1261/rna.7105504
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http://dx.doi.org/10.1261/rna.7105504DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1370636PMC
October 2004

The human GRINL1A gene defines a complex transcription unit, an unusual form of gene organization in eukaryotes.

Genomics 2004 Aug;84(2):265-76

Department of Anesthesia, University of Pennsylvania School of Medicine, 336 John Morgan Building, 3620 Hamilton Walk, Philadelphia, PA 19104, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S088875430400091
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http://dx.doi.org/10.1016/j.ygeno.2004.04.004DOI Listing
August 2004

Genetic divergence of the rhesus macaque major histocompatibility complex.

Genome Res 2004 Aug;14(8):1501-15

The Clinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, USA.

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http://dx.doi.org/10.1101/gr.2134504DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC509259PMC
August 2004

Majority of divergence between closely related DNA samples is due to indels.

Proc Natl Acad Sci U S A 2003 Apr 2;100(8):4661-5. Epub 2003 Apr 2.

California Institute of Technology, 101 Dahlia Avenue, Corona del Mar, CA 92625, USA.

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http://dx.doi.org/10.1073/pnas.0330964100DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC153612PMC
April 2003

The DNA sequence and analysis of human chromosome 14.

Authors:
Roland Heilig Ralph Eckenberg Jean-Louis Petit Núria Fonknechten Corinne Da Silva Laurence Cattolico Michaël Levy Valérie Barbe Véronique de Berardinis Abel Ureta-Vidal Eric Pelletier Virginie Vico Véronique Anthouard Lee Rowen Anup Madan Shizhen Qin Hui Sun Hui Du Kymberlie Pepin François Artiguenave Catherine Robert Corinne Cruaud Thomas Brüls Olivier Jaillon Lucie Friedlander Gaelle Samson Philippe Brottier Susan Cure Béatrice Ségurens Franck Anière Sylvie Samain Hervé Crespeau Nissa Abbasi Nathalie Aiach Didier Boscus Rachel Dickhoff Monica Dors Ivan Dubois Cynthia Friedman Michel Gouyvenoux Rose James Anuradha Madan Barbara Mairey-Estrada Sophie Mangenot Nathalie Martins Manuela Ménard Sophie Oztas Amber Ratcliffe Tristan Shaffer Barbara Trask Benoit Vacherie Chadia Bellemere Caroline Belser Marielle Besnard-Gonnet Delphine Bartol-Mavel Magali Boutard Stéphanie Briez-Silla Stephane Combette Virginie Dufossé-Laurent Carolyne Ferron Christophe Lechaplais Claudine Louesse Delphine Muselet Ghislaine Magdelenat Emilie Pateau Emmanuelle Petit Peggy Sirvain-Trukniewicz Arnaud Trybou Nathalie Vega-Czarny Elodie Bataille Elodie Bluet Isabelle Bordelais Maria Dubois Corinne Dumont Thomas Guérin Sébastien Haffray Rachid Hammadi Jacqueline Muanga Virginie Pellouin Dominique Robert Edith Wunderle Gilbert Gauguet Alice Roy Laurent Sainte-Marthe Jean Verdier Claude Verdier-Discala LaDeana Hillier Lucinda Fulton John McPherson Fumihiko Matsuda Richard Wilson Claude Scarpelli Gábor Gyapay Patrick Wincker William Saurin Francis Quétier Robert Waterston Leroy Hood Jean Weissenbach

Nature 2003 Feb 1;421(6923):601-7. Epub 2003 Jan 1.

Genoscope-Centre National de Séquençage, 91000, Evry, France.

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http://www.nature.com/articles/nature01348
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http://dx.doi.org/10.1038/nature01348DOI Listing
February 2003

QUOD ERAT FACIENDUM: sequence analysis of the H2-D and H2-Q regions of 129/SvJ mice.

Immunogenetics 2002 Oct 20;54(7):479-89. Epub 2002 Sep 20.

University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390-9050, USA.

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http://link.springer.com/10.1007/s00251-002-0494-0
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http://dx.doi.org/10.1007/s00251-002-0494-0DOI Listing
October 2002