Laurent Noe, PhD - CRIStAL (UMR9189 Universite de Lille - CNRS) / INRIA Lille

Laurent Noe

PhD

CRIStAL (UMR9189 Universite de Lille - CNRS) / INRIA Lille

Lille | France

Laurent Noe, PhD - CRIStAL (UMR9189 Universite de Lille - CNRS) / INRIA Lille

Laurent Noe

PhD

Introduction

Primary Affiliation: CRIStAL (UMR9189 Universite de Lille - CNRS) / INRIA Lille - Lille , France

Publications

15Publications

128Reads

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393PubMed Central Citations

Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing.

Nucleic Acids Res 2016 Jan 2;44(D1):D1113-8. Epub 2015 Nov 2.

University of Lille, CRIStAL, UMR CNRS 9189, cité scientifique-bat M3ext, 59650 Villeneuve d'Ascq, France Inria Lille Nord Europe, Bonsai team, Parc scientifique de la Haute Borne, 40, avenue Halley-Bt A, 59650 Villeneuve d'Ascq, France University of Lille, bilille, cité scientifique-bat M3ext, 59650 Villeneuve d'Ascq, France

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http://dx.doi.org/10.1093/nar/gkv1143DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702827PMC
January 2016
6 Reads
10 Citations
9.112 Impact Factor

Smiles2Monomers: a link between chemical and biological structures for polymers.

J Cheminform 2015 29;7:62. Epub 2015 Dec 29.

Univ. Lille, CNRS, Centrale Lille, UMR 9189-CRIStAL-Centre de Recherche en Informatique Signal et Automatique de Lille, 59000 Lille, France ; Inria Lille Nord Europe, Bonsai team, Parc scientifique de la Haute Borne, 40 avenue Halley, 59650 Villeneuve d'Ascq, France.

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http://dx.doi.org/10.1186/s13321-015-0111-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4693424PMC
December 2015
2 Reads
3 Citations
4.550 Impact Factor

Deciphering metatranscriptomic data.

Methods Mol Biol 2015 ;1269:279-91

LIFL, UMR CNRS 8022, Lille 1 University, Villeneuve d'Ascq, France,

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http://dx.doi.org/10.1007/978-1-4939-2291-8_17DOI Listing
September 2015
26 Reads
1 Citation

A coverage criterion for spaced seeds and its applications to support vector machine string kernels and k-mer distances.

J Comput Biol 2014 Dec;21(12):947-63

1 Laboratoire d'Informatique Fondamentale de Lille (LIFL) (UMR 8022 Lille 1/CNRS) - Inria Lille, Villeneuve d'Ascq, France .

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http://dx.doi.org/10.1089/cmb.2014.0173DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4253314PMC
December 2014
2 Reads
4 Citations
1.740 Impact Factor

Improved search heuristics find 20,000 new alignments between human and mouse genomes.

Nucleic Acids Res 2014 Apr 3;42(7):e59. Epub 2014 Feb 3.

Computational Biology Research Center, AIST, 2-4-7 Aomi, Koto-ku, Tokyo 135-0064, Japan and LIFL (UMR 8022)/INRIA Lille Nord-Europe, bat M3 Ext., Université Lille1 59655 Villeneuve d'Ascq Cedex, France.

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http://dx.doi.org/10.1093/nar/gku104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985675PMC
April 2014
2 Reads
6 Citations
9.112 Impact Factor

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data.

Bioinformatics 2012 Dec 15;28(24):3211-7. Epub 2012 Oct 15.

LIFL (UMR CNRS 8022 Université Lille 1), France.

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http://dx.doi.org/10.1093/bioinformatics/bts611DOI Listing
December 2012
9 Reads
237 Citations
4.981 Impact Factor

Designing Efficient Spaced Seeds for SOLiD Read Mapping.

Adv Bioinformatics 2010 16. Epub 2010 Sep 16.

INRIA Lille-Nord Europe, LIFL/CNRS, Université Lille 1, 59655 Villeneuve d'Ascq, France.

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http://dx.doi.org/10.1155/2010/708501DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2945724PMC
July 2011
19 Reads
3 Citations

Back-translation for discovering distant protein homologies in the presence of frameshift mutations.

Algorithms Mol Biol 2010 Jan 4;5(1). Epub 2010 Jan 4.

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http://dx.doi.org/10.1186/1748-7188-5-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2821327PMC
January 2010
9 Reads
4 Citations
1.463 Impact Factor

On subset seeds for protein alignment.

IEEE/ACM Trans Comput Biol Bioinform 2009 Jul-Sep;6(3):483-94

Institute of Mathematical Problems in Biology, Pushchino, Moscow Region 142290, Russia.

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http://dx.doi.org/10.1109/TCBB.2009.4DOI Listing
November 2009
27 Reads
5 Citations
1.440 Impact Factor

Optimal neighborhood indexing for protein similarity search.

BMC Bioinformatics 2008 Dec 16;9:534. Epub 2008 Dec 16.

Symbiose team-project, IRISA INRIA, Rennes, France.

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http://dx.doi.org/10.1186/1471-2105-9-534DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2640386PMC
December 2008
5 Reads
2.580 Impact Factor

Reconsidering the significance of genomic word frequencies.

Trends Genet 2007 Nov 26;23(11):543-6. Epub 2007 Oct 26.

Department of Computer Science and Operations Research, Université de Montréal, 8, succ. Centre-Ville, Montréal, Québec, Canada.

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http://dx.doi.org/10.1016/j.tig.2007.07.008DOI Listing
November 2007
5 Reads
10 Citations
9.920 Impact Factor

Multiseed lossless filtration.

IEEE/ACM Trans Comput Biol Bioinform 2005 Jan-Mar;2(1):51-61

INRIA/LORIA, 615, rue du Jardin Botanique, B.P. 101, 54602 Villers-lès-Nancy, France.

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http://dx.doi.org/10.1109/TCBB.2005.12DOI Listing
November 2006
3 Reads
10 Citations
1.440 Impact Factor

A unifying framework for seed sensitivity and its application to subset seeds.

J Bioinform Comput Biol 2006 Apr;4(2):553-69

LIFL/CNRS, Bât. M3, 59655 Villeneuve d'Ascq, France.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2824148PMC
http://dx.doi.org/10.1142/s0219720006001977DOI Listing
April 2006
4 Reads
16 Citations
0.931 Impact Factor

YASS: enhancing the sensitivity of DNA similarity search.

Nucleic Acids Res 2005 Jul;33(Web Server issue):W540-3

LORIA/INRIA-Lorraine 615 rue du Jardin Botanique, 54602 Villers-les-Nancy, France.

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http://dx.doi.org/10.1093/nar/gki478DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1160238PMC
July 2005
5 Reads
74 Citations
9.112 Impact Factor

Improved hit criteria for DNA local alignment.

BMC Bioinformatics 2004 Oct 14;5:149. Epub 2004 Oct 14.

LORIA/INRIA-Lorraine, Villers-lès-Nancy France.

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http://dx.doi.org/10.1186/1471-2105-5-149DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC526756PMC
October 2004
4 Reads
10 Citations
2.580 Impact Factor