Laszlo G Nagy

Laszlo G Nagy

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Laszlo G Nagy

Laszlo G Nagy

Publications by authors named "Laszlo G Nagy"

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Model Choice, Missing Data, and Taxon Sampling Impact Phylogenomic Inference of Deep Basidiomycota Relationships.

Syst Biol 2020 01;69(1):17-37

Synthetic and Systems Biology Unit, Institute of Biochemistry, BRC-HAS, Szeged 6726, Hungary.

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http://dx.doi.org/10.1093/sysbio/syz029DOI Listing
January 2020

Novel phylogenetic methods are needed for understanding gene function in the era of mega-scale genome sequencing.

Nucleic Acids Res 2020 Jan 16. Epub 2020 Jan 16.

Synthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Centre, Temesvari krt 62. Szeged 6726, Hungary.

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http://dx.doi.org/10.1093/nar/gkz1241DOI Listing
January 2020

The genus Parasola: phylogeny and the description of three new species.

Mycologia 2017 Jul-Aug;109(4):620-629. Epub 2017 Nov 15.

g Synthetic and Systems Biology Unit , Institute of Biochemistry , BRC, HAS, Temesvári körút 62, H-6726 Szeged , Hungary.

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http://dx.doi.org/10.1080/00275514.2017.1386526DOI Listing
November 2018

Complex multicellularity in fungi: evolutionary convergence, single origin, or both?

Biol Rev Camb Philos Soc 2018 11 19;93(4):1778-1794. Epub 2018 Apr 19.

Synthetic and Systems Biology Unit, Institute of Biochemistry, BRC-HAS, 62 Temesvári krt, 6726, Szeged, Hungary.

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http://dx.doi.org/10.1111/brv.12418DOI Listing
November 2018

Fungal Phylogeny in the Age of Genomics: Insights Into Phylogenetic Inference From Genome-Scale Datasets.

Adv Genet 2017 20;100:49-72. Epub 2017 Oct 20.

Eötvös Loránd University, Budapest, Hungary.

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http://dx.doi.org/10.1016/bs.adgen.2017.09.008DOI Listing
July 2018

Many roads to convergence.

Authors:
László G Nagy

Science 2018 07;361(6398):125-126

Synthetic and Systems Biology Unit, Biological Research Center, Hungarian Academy of Sciences, 6726 Szeged, Hungary.

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http://dx.doi.org/10.1126/science.aau2409DOI Listing
July 2018

Considerations and consequences of allowing DNA sequence data as types of fungal taxa.

Authors:
Juan Carlos Zamora Måns Svensson Roland Kirschner Ibai Olariaga Svengunnar Ryman Luis Alberto Parra József Geml Anna Rosling Slavomír Adamčík Teuvo Ahti M Catherine Aime A Martyn Ainsworth László Albert Edgardo Albertó Alberto Altés García Dmitry Ageev Reinhard Agerer Begoña Aguirre-Hudson Joe Ammirati Harry Andersson Claudio Angelini Vladimír Antonín Takayuki Aoki André Aptroot Didier Argaud Blanca Imelda Arguello Sosa Arne Aronsen Ulf Arup Bita Asgari Boris Assyov Violeta Atienza Ditte Bandini João Luís Baptista-Ferreira Hans-Otto Baral Tim Baroni Robert Weingart Barreto Henry Beker Ann Bell Jean-Michel Bellanger Francesco Bellù Martin Bemmann Mika Bendiksby Egil Bendiksen Katriina Bendiksen Lajos Benedek Anna Bérešová-Guttová Franz Berger Reinhard Berndt Annarosa Bernicchia Alona Yu Biketova Enrico Bizio Curtis Bjork Teun Boekhout David Boertmann Tanja Böhning Florent Boittin Carlos G Boluda Menno W Boomsluiter Jan Borovička Tor Erik Brandrud Uwe Braun Irwin Brodo Tatiana Bulyonkova Harold H Burdsall Bart Buyck Ana Rosa Burgaz Vicent Calatayud Philippe Callac Emanuele Campo Massimo Candusso Brigitte Capoen Joaquim Carbó Matteo Carbone Rafael F Castañeda-Ruiz Michael A Castellano Jie Chen Philippe Clerc Giovanni Consiglio Gilles Corriol Régis Courtecuisse Ana Crespo Cathy Cripps Pedro W Crous Gladstone Alves da Silva Meiriele da Silva Marjo Dam Nico Dam Frank Dämmrich Kanad Das Linda Davies Eske De Crop Andre De Kesel Ruben De Lange Bárbara De Madrignac Bonzi Thomas Edison E Dela Cruz Lynn Delgat Vincent Demoulin Dennis E Desjardin Paul Diederich Bálint Dima Maria Martha Dios Pradeep Kumar Divakar Clovis Douanla-Meli Brian Douglas Elisandro Ricardo Drechsler-Santos Paul S Dyer Ursula Eberhardt Damien Ertz Fernando Esteve-Raventós Javier Angel Etayo Salazar Vera Evenson Guillaume Eyssartier Edit Farkas Alain Favre Anna G Fedosova Mario Filippa Péter Finy Adam Flakus Simón Fos Jacques Fournier André Fraiture Paolo Franchi Ana Esperanza Franco Molano Gernot Friebes Andreas Frisch Alan Fryday Giuliana Furci Ricardo Galán Márquez Matteo Garbelotto Joaquina María García-Martín Mónica A García Otálora Dania García Sánchez Alain Gardiennet Sigisfredo Garnica Isaac Garrido Benavent Genevieve Gates Alice da Cruz Lima Gerlach Masoomeh Ghobad-Nejhad Tatiana B Gibertoni Tine Grebenc Irmgard Greilhuber Bella Grishkan Johannes Z Groenewald Martin Grube Gérald Gruhn Cécile Gueidan Gro Gulden Luis Fp Gusmão Josef Hafellner Michel Hairaud Marek Halama Nils Hallenberg Roy E Halling Karen Hansen Christoffer Bugge Harder Jacob Heilmann-Clausen Stip Helleman Alain Henriot Margarita Hernandez-Restrepo Raphaël Herve Caroline Hobart Mascha Hoffmeister Klaus Høiland Jan Holec Håkon Holien Karen Hughes Vit Hubka Seppo Huhtinen Boris Ivančević Marian Jagers Walter Jaklitsch AnnaElise Jansen Ruvishika S Jayawardena Thomas Stjernegaard Jeppesen Mikael Jeppson Peter Johnston Per Magnus Jørgensen Ingvar Kärnefelt Liudmila B Kalinina Gintaras Kantvilas Mitko Karadelev Taiga Kasuya Ivona Kautmanová Richard W Kerrigan Martin Kirchmair Anna Kiyashko Dániel G Knapp Henning Knudsen Kerry Knudsen Tommy Knutsson Miroslav Kolařík Urmas Kõljalg Alica Košuthová Attila Koszka Heikki Kotiranta Vera Kotkova Ondřej Koukol Jiří Kout Gábor M Kovács Martin Kříž Åsa Kruys Viktor Kučera Linas Kudzma Francisco Kuhar Martin Kukwa T K Arun Kumar Vladimír Kunca Ivana Kušan Thomas W Kuyper Carlos Lado Thomas Læssøe Patrice Lainé Ewald Langer Ellen Larsson Karl-Henrik Larsson Gary Laursen Christian Lechat Serena Lee James C Lendemer Laura Levin Uwe Lindemann Håkan Lindström Xingzhong Liu Regulo Carlos Llarena Hernandez Esteve Llop Csaba Locsmándi Deborah Jean Lodge Michael Loizides László Lőkös Jennifer Luangsa-Ard Matthias Lüderitz Thorsten Lumbsch Matthias Lutz Dan Mahoney Ekaterina Malysheva Vera Malysheva Patinjareveettil Manimohan Yasmina Marin-Felix Guilhermina Marques Rubén Martínez-Gil Guy Marson Gerardo Mata P Brandon Matheny Geir Harald Mathiassen Neven Matočec Helmut Mayrhofer Mehdi Mehrabi Ireneia Melo Armin Mešić Andrew S Methven Otto Miettinen Ana M Millanes Romero Andrew N Miller James K Mitchell Roland Moberg Pierre-Arthur Moreau Gabriel Moreno Olga Morozova Asunción Morte Lucia Muggia Guillermo Muñoz González Leena Myllys István Nagy László G Nagy Maria Alice Neves Tuomo Niemelä Pier Luigi Nimis Nicolas Niveiro Machiel E Noordeloos Anders Nordin Sara Raouia Noumeur Yuri Novozhilov Jorinde Nuytinck Esteri Ohenoja Patricia Oliveira Fiuza Alan Orange Alexander Ordynets Beatriz Ortiz-Santana Leticia Pacheco Ferenc Pál-Fám Melissa Palacio Zdeněk Palice Viktor Papp Kadri Pärtel Julia Pawlowska Aurelia Paz Ursula Peintner Shaun Pennycook Olinto Liparini Pereira Pablo Pérez Daniëls Miquel À Pérez-De-Gregorio Capella Carlos Manuel Pérez Del Amo Sergio Pérez Gorjón Sergio Pérez-Ortega Israel Pérez-Vargas Brian A Perry Jens H Petersen Ronald H Petersen Donald H Pfister Chayanard Phukhamsakda Marcin Piątek Meike Piepenbring Raquel Pino-Bodas Juan Pablo Pinzón Esquivel Paul Pirot Eugene S Popov Orlando Popoff María Prieto Álvaro Christian Printzen Nadezhda Psurtseva Witoon Purahong Luis Quijada Gerhard Rambold Natalia A Ramírez Huzefa Raja Olivier Raspé Tania Raymundo Martina Réblová Yury A Rebriev Juan de Dios Reyes García Miguel Ángel Ribes Ripoll Franck Richard Mike J Richardson Víctor J Rico Gerardo Lucio Robledo Flavia Rodrigues Barbosa Cristina Rodriguez-Caycedo Pamela Rodriguez-Flakus Anna Ronikier Luis Rubio Casas Katerina Rusevska Günter Saar Irja Saar Isabel Salcedo Sergio M Salcedo Martínez Carlos A Salvador Montoya Santiago Sánchez-Ramírez J Vladimir Sandoval-Sierra Sergi Santamaria Josiane Santana Monteiro Hans Josef Schroers Barbara Schulz Geert Schmidt-Stohn Trond Schumacher Beatrice Senn-Irlet Hana Ševčíková Oleg Shchepin Takashi Shirouzu Anton Shiryaev Klaus Siepe Esteban B Sir Mohammad Sohrabi Karl Soop Viacheslav Spirin Toby Spribille Marc Stadler Joost Stalpers Soili Stenroos Ave Suija Stellan Sunhede Sten Svantesson Sigvard Svensson Tatyana Yu Svetasheva Krzysztof Świerkosz Heidi Tamm Hatira Taskin Adrien Taudière Jan-Olof Tedebrand Raúl Tena Lahoz Marina Temina Arne Thell Marco Thines Göran Thor Holger Thüs Leif Tibell Sanja Tibell Einar Timdal Zdenko Tkalčec Tor Tønsberg Gérard Trichies Dagmar Triebel Andrei Tsurykau Rodham E Tulloss Veera Tuovinen Miguel Ulloa Sosa Carlos Urcelay François Valade Ricardo Valenzuela Garza Pieter van den Boom Nicolas Van Vooren Aida M Vasco-Palacios Jukka Vauras Juan Manuel Velasco Santos Else Vellinga Annemieke Verbeken Per Vetlesen Alfredo Vizzini Hermann Voglmayr Sergey Volobuev Wolfgang von Brackel Elena Voronina Grit Walther Roy Watling Evi Weber Mats Wedin Øyvind Weholt Martin Westberg Eugene Yurchenko Petr Zehnálek Huang Zhang Mikhail P Zhurbenko Stefan Ekman

IMA Fungus 2018 Jun 24;9(1):167-175. Epub 2018 May 24.

Museum of Evolution, Uppsala University, Norbyvägen 16, 75236 Uppsala, Sweden.

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http://www.ingentaconnect.com/content/10.5598/imafungus.2018
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http://dx.doi.org/10.5598/imafungus.2018.09.01.10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6048565PMC
June 2018

Armillaria.

Curr Biol 2018 04;28(7):R297-R298

Synthetic and Systems Biology Unit, Biological Research Center, Hungarian Academy of Sciences, Szeged, 6726, Hungary. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S09609822183002
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http://dx.doi.org/10.1016/j.cub.2018.01.026DOI Listing
April 2018

Six Key Traits of Fungi: Their Evolutionary Origins and Genetic Bases.

Microbiol Spectr 2017 07;5(4)

Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Budapest, Hungary.

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http://dx.doi.org/10.1128/microbiolspec.FUNK-0036-2016DOI Listing
July 2017

Evolution: Complex Multicellular Life with 5,500 Genes.

Authors:
Laszlo G Nagy

Curr Biol 2017 06;27(12):R609-R612

Synthetic and Systems Biology Unit, Biological Research Center, HAS, Szeged, Hungary. Electronic address:

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http://dx.doi.org/10.1016/j.cub.2017.04.032DOI Listing
June 2017

NFAP2, a novel cysteine-rich anti-yeast protein from Neosartorya fischeri NRRL 181: isolation and characterization.

AMB Express 2016 Dec 15;6(1):75. Epub 2016 Sep 15.

Department of Microbiology, Faculty of Science and Informatics, University of Szeged, Közép fasor 52, Szeged, 6726, Hungary.

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http://dx.doi.org/10.1186/s13568-016-0250-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5025423PMC
December 2016

Psathyloma, a new genus in Hymenogastraceae described from New Zealand.

Mycologia 2016 Mar-Apr;108(2):397-404. Epub 2016 Jan 7.

Fungal Evolutionary Genomics Group, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, 6726, Szeged, Hungary.

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http://dx.doi.org/10.3852/15-143DOI Listing
June 2016

Phylogenetic relationships and morphological evolution in Lentinus, Polyporellus and Neofavolus, emphasizing southeastern Asian taxa.

Mycologia 2015 May-Jun;107(3):460-74. Epub 2015 Feb 6.

Biology Department, Clark University, 950 Main Street Worcester, Massachusetts 01610

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http://dx.doi.org/10.3852/14-084DOI Listing
August 2015

Lignin-degrading peroxidases in Polyporales: an evolutionary survey based on 10 sequenced genomes.

Mycologia 2013 Nov-Dec;105(6):1428-44. Epub 2013 Aug 6.

Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu 9, E-28040-Madrid, Spain.

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http://www.mycologia.org/content/105/6/1428.full.pdf
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http://www.mycologia.org/cgi/doi/10.3852/13-059
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http://dx.doi.org/10.3852/13-059DOI Listing
January 2014

Phylogenetic analyses of Coprinopsis sections Lanatuli and Atramentarii identify multiple species within morphologically defined taxa.

Mycologia 2013 Jan-Feb;105(1):112-24. Epub 2012 Oct 16.

Department of Microbiology, University of Szeged, Szeged, Hungary.

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https://www.tandfonline.com/doi/full/10.3852/12-136
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http://dx.doi.org/10.3852/12-136DOI Listing
March 2013

Homology modeling and phylogenetic relationships of catalases of an opportunistic pathogen Rhizopus oryzae.

Life Sci 2012 Aug 28;91(3-4):115-26. Epub 2012 Jun 28.

Institute of Pharmaceutical Analysis, Faculty of Pharmacy, University of Szeged H-6720 Szeged, Somogyi u. 4, Hungary.

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http://dx.doi.org/10.1016/j.lfs.2012.06.016DOI Listing
August 2012

The evolution of defense mechanisms correlate with the explosive diversification of autodigesting Coprinellus mushrooms (Agaricales, Fungi).

Syst Biol 2012 Jul 4;61(4):595-607. Epub 2012 Jan 4.

Department of Microbiology, Faculty of Science and Informatics, University of Szeged, Kozep fasor 52., H-6726 Szeged, Hungary.

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http://dx.doi.org/10.1093/sysbio/sys002DOI Listing
July 2012

The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes.

Science 2012 Jun;336(6089):1715-9

Biology Department, Clark University, Worcester, MA 01610, USA.

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http://as.vanderbilt.edu/rokaslab/pdfs/2012_Floudas_etal_Sci
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http://www.sciencemag.org/cgi/doi/10.1126/science.1221748
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http://dx.doi.org/10.1126/science.1221748DOI Listing
June 2012

Phylogeny and species delimitation in the genus Coprinellus with special emphasis on the haired species.

Mycologia 2012 Jan-Feb;104(1):254-75. Epub 2011 Sep 21.

Department of Microbiology, University of Szeged, Szeged, Hungary.

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http://www.mycologia.org/content/104/1/254.full.pdf
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http://www.mycologia.org/cgi/doi/10.3852/11-149
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http://dx.doi.org/10.3852/11-149DOI Listing
May 2012

Where is the unseen fungal diversity hidden? A study of Mortierella reveals a large contribution of reference collections to the identification of fungal environmental sequences.

New Phytol 2011 Aug 31;191(3):789-94. Epub 2011 Mar 31.

Faculty of Science and Informatics, Department of Microbiology, University of Szeged, Közép fasor 52, H-6726 Szeged, Hungary.

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http://dx.doi.org/10.1111/j.1469-8137.2011.03707.xDOI Listing
August 2011

Understanding the evolutionary processes of fungal fruiting bodies: correlated evolution and divergence times in the Psathyrellaceae.

Syst Biol 2011 May 2;60(3):303-17. Epub 2011 Mar 2.

Department of Microbiology, Faculty of Science and Informatics, University of Szeged, Közép fasor 52, H-6726 Szeged, Hungary.

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https://academic.oup.com/sysbio/article/60/3/303/1665734
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http://dx.doi.org/10.1093/sysbio/syr005DOI Listing
May 2011

The evolution of autodigestion in the mushroom family Psathyrellaceae (Agaricales) inferred from Maximum Likelihood and Bayesian methods.

Mol Phylogenet Evol 2010 Dec 27;57(3):1037-48. Epub 2010 Aug 27.

Department of Microbiology, Faculty of Science and Informatics, University of Szeged, Szeged, Hungary, H-6726 Szeged, Közép Fasor 52, Hungary.

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http://dx.doi.org/10.1016/j.ympev.2010.08.022DOI Listing
December 2010

A new beta-glucosidase gene from the zygomycete fungus Rhizomucor miehei.

Antonie Van Leeuwenhoek 2010 Jan 8;97(1):1-10. Epub 2009 Oct 8.

Department of Microbiology, Faculty of Science and Informatics, University of Szeged, 6726 Szeged, Közép fasor 52, Hungary.

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http://link.springer.com/10.1007/s10482-009-9382-z
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http://dx.doi.org/10.1007/s10482-009-9382-zDOI Listing
January 2010