Publications by authors named "Kyunggon Kim"

46Publications

Protein Translocation Acquires Substrate Selectivity Through ER Stress-Induced Reassembly of Translocon Auxiliary Components.

Cells 2020 02 24;9(2). Epub 2020 Feb 24.

Department of Biomedical Sciences, University of Ulsan College of Medicine, Seoul 05505, Korea.

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http://dx.doi.org/10.3390/cells9020518DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7072789PMC
February 2020

Transglutaminase 2 mediates hypoxia-induced selective mRNA translation via polyamination of 4EBPs.

Life Sci Alliance 2020 03 19;3(3). Epub 2020 Feb 19.

Department of Biochemistry and Molecular Biology, Seoul National University College of Medicine, Seoul, Korea

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http://dx.doi.org/10.26508/lsa.201900565DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7032569PMC
March 2020

A CRISPR-based base-editing screen for the functional assessment of BRCA1 variants.

Oncogene 2020 01 29;39(1):30-35. Epub 2019 Aug 29.

Department of Biomedical Sciences, Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Republic of Korea.

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http://dx.doi.org/10.1038/s41388-019-0968-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6937211PMC
January 2020

Tumour growth rate of follicular thyroid carcinoma is not different from that of follicular adenoma.

Clin Endocrinol (Oxf) 2018 06 2;88(6):936-942. Epub 2018 Apr 2.

Departments of Internal Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.

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http://dx.doi.org/10.1111/cen.13591DOI Listing
June 2018

NEDD4L limits cAMP signaling through ubiquitination of CREB-regulated transcription coactivator 3.

FASEB J 2018 07 5;32(7):4053-4062. Epub 2018 Mar 5.

Department of Biomedical Sciences, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, Seoul, South Korea.

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http://dx.doi.org/10.1096/fj.201701406RDOI Listing
July 2018

Top-Down Proteomics Enables Comparative Analysis of Brain Proteoforms Between Mouse Strains.

Anal Chem 2018 03 26;90(6):3802-3810. Epub 2018 Feb 26.

Departments of Chemistry, Molecular Biosciences and the Proteomics Center of Excellence , Northwestern University , 2145 North Sheridan Road , Evanston , Illinois 60208 , United States.

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http://dx.doi.org/10.1021/acs.analchem.7b04108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5861018PMC
March 2018

Sirt1 Regulates DNA Methylation and Differentiation Potential of Embryonic Stem Cells by Antagonizing Dnmt3l.

Cell Rep 2017 02;18(8):1930-1945

Department of Biomedical Sciences, Asan Medical Center, University of Ulsan College of Medicine, Seoul 05505, Korea; Department of Physiology, University of Ulsan College of Medicine, Seoul 05505, Korea. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2017.01.074DOI Listing
February 2017

4E-BP is a target of the GCN2-ATF4 pathway during Drosophila development and aging.

J Cell Biol 2017 01 15;216(1):115-129. Epub 2016 Dec 15.

Department of Cell Biology, New York University School of Medicine, New York, NY 10016

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http://dx.doi.org/10.1083/jcb.201511073DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5223598PMC
January 2017

Optical Aptamer Probes of Fluorescent Imaging to Rapid Monitoring of Circulating Tumor Cell.

Sensors (Basel) 2016 Nov 23;16(11). Epub 2016 Nov 23.

The Institute for the 3Rs, College of Veterinary Medicine, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea.

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http://dx.doi.org/10.3390/s16111909DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5134568PMC
November 2016

Priming with ceramide-1 phosphate promotes the therapeutic effect of mesenchymal stem/stromal cells on pulmonary artery hypertension.

Biochem Biophys Res Commun 2016 Apr 15;473(1):35-41. Epub 2016 Mar 15.

Department of Biomedical Sciences, University of Ulsan College of Medicine, Seoul, South Korea; Department of Physiology, University of Ulsan College of Medicine, Seoul, South Korea. Electronic address:

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http://dx.doi.org/10.1016/j.bbrc.2016.03.046DOI Listing
April 2016

Reducing protein oxidation in low-flow electrospray enables deeper investigation of proteoforms by top down proteomics.

EuPA Open Proteom 2015 Sep 5;8:40-47. Epub 2015 Jun 5.

Departments of Chemistry, Molecular Biosciences and the Proteomics Center of Excellence, Northwestern University, 2145 N. Sheridan Road, Evanston, IL 60208, United States.

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http://dx.doi.org/10.1016/j.euprot.2015.05.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4704458PMC
September 2015

Crystal Structure of Streptococcus pyogenes Cas1 and Its Interaction with Csn2 in the Type II CRISPR-Cas System.

Structure 2016 Jan 3;24(1):70-79. Epub 2015 Dec 3.

Department of Agricultural Biotechnology, Seoul National University, Seoul 151-921, Korea; Center for Food and Bioconvergence, Seoul National University, Seoul 151-921, Korea; Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea. Electronic address:

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http://www.cell.com/structure/pdf/S0969-2126(15)00458-X.pdf
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http://www.cell.com/cms/attachment/2040667351/2054303390/mmc
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http://linkinghub.elsevier.com/retrieve/pii/S096921261500458
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http://dx.doi.org/10.1016/j.str.2015.10.019DOI Listing
January 2016

Development of Diagnostic Biomarkers for Detecting Diabetic Retinopathy at Early Stages Using Quantitative Proteomics.

J Diabetes Res 2016 9;2016:6571976. Epub 2015 Nov 9.

Department of Biomedical Sciences, Seoul National University College of Medicine, 28 Yongon-Dong, Seoul 110-799, Republic of Korea ; Department of Biomedical Engineering, Seoul National University College of Medicine, 28 Yongon-Dong, Seoul 110-799, Republic of Korea.

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http://dx.doi.org/10.1155/2016/6571976DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4657408PMC
October 2016

Top Down Proteomics Reveals Mature Proteoforms Expressed in Subcellular Fractions of the Echinococcus granulosus Preadult Stage.

J Proteome Res 2015 Nov 28;14(11):4805-14. Epub 2015 Oct 28.

Laboratório de Genômica Estrutural e Funcional, Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul , Avenida Bento Gonçalves, 9500 Porto Alegre, Rio Grande do Sul, Brazil.

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http://dx.doi.org/10.1021/acs.jproteome.5b00642DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4638118PMC
November 2015

Measurement of glycosylated alpha-fetoprotein improves diagnostic power over the native form in hepatocellular carcinoma.

PLoS One 2014 13;9(10):e110366. Epub 2014 Oct 13.

Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea; Department of Biomedical Engineering, Seoul National University College of Medicine, Seoul, Republic of Korea.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0110366PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4195728PMC
December 2015

Integrated approach using multistep enzyme digestion, TiO2 enrichment, and database search for in-depth phosphoproteomic profiling.

Proteomics 2015 Jan 8;15(2-3):618-23. Epub 2014 Oct 8.

Departments of Biomedical Sciences, Medical Research Center, Seoul National University College of Medicine, Seoul, Korea; Biomedical Engineering, Medical Research Center, Seoul National University College of Medicine, Seoul, Korea; Institute of Medical & Biological Engineering, Medical Research Center, Seoul National University College of Medicine, Seoul, Korea.

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http://dx.doi.org/10.1002/pmic.201400102DOI Listing
January 2015

Applying label-free quantitation to top down proteomics.

Anal Chem 2014 May 7;86(10):4961-8. Epub 2014 May 7.

Departments of Chemistry, Molecular Biosciences and the Proteomics Center of Excellence , 2145 N. Sheridan Road, Evanston, Illinois 60208, United States.

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http://dx.doi.org/10.1021/ac500395kDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4033644PMC
May 2014

Determination of selected reaction monitoring peptide transitions via multiplexed product-ion scan modes.

Rapid Commun Mass Spectrom 2014 Apr;28(7):773-80

Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology and College of Medicine or College of Pharmacy, Seoul National University, Seoul, Republic of Korea.

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http://dx.doi.org/10.1002/rcm.6837DOI Listing
April 2014

The proto-oncoprotein FBI-1 interacts with MBD3 to recruit the Mi-2/NuRD-HDAC complex and BCoR and to silence p21WAF/CDKN1A by DNA methylation.

Nucleic Acids Res 2013 Jul 8;41(13):6403-20. Epub 2013 May 8.

Department of Biochemistry and Molecular Biology, BK21 Project for Medical Science, Severance Biomedical Research Institute, Yonsei University School of Medicine, 50 Yonsei-Ro, SeoDaeMoon-Gu, Seoul, 120-752, Korea.

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http://dx.doi.org/10.1093/nar/gkt359DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3711425PMC
July 2013

Verification of multimarkers for detection of early stage diabetic retinopathy using multiple reaction monitoring.

J Proteome Res 2013 Mar 14;12(3):1078-89. Epub 2013 Feb 14.

Department of Biomedical Engineering, Institute of Medical & Biological Engineering, Medical Research Center, Seoul National University College of Medicine, 28 Yongon-Dong, Seoul 110-799, Korea.

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http://dx.doi.org/10.1021/pr3012073DOI Listing
March 2013

Differential proteome profiling using iTRAQ in microalbuminuric and normoalbuminuric type 2 diabetic patients.

Exp Diabetes Res 2012 27;2012:168602. Epub 2012 Mar 27.

Department of Biomedical Sciences, Seoul National University College of Medicine, 28 Yongon-Dong, Seoul 110-799, Republic of Korea.

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http://dx.doi.org/10.1155/2012/168602DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3318901PMC
July 2012

Comprehensive phosphoproteome analysis of INS-1 pancreatic β-cells using various digestion strategies coupled with liquid chromatography-tandem mass spectrometry.

J Proteome Res 2012 Apr 14;11(4):2206-23. Epub 2012 Mar 14.

Department of Biomedical Engineering, Institute of Medical & Biological Engineering, Medical Research Center, College of Medicine, Yongon-Dong, Seoul, 110-799 Korea.

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http://pubs.acs.org/doi/10.1021/pr200990b
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http://dx.doi.org/10.1021/pr200990bDOI Listing
April 2012

Development of 68Ga-labeled mannosylated human serum albumin (MSA) as a lymph node imaging agent for positron emission tomography.

Nucl Med Biol 2011 Apr 3;38(3):371-9. Epub 2010 Dec 3.

Department of Nuclear Medicine, Institute of Radiation Medicine, Seoul National University College of Medicine, Seoul, South Korea.

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http://dx.doi.org/10.1016/j.nucmedbio.2010.09.010DOI Listing
April 2011

Verification of biomarkers for diabetic retinopathy by multiple reaction monitoring.

J Proteome Res 2010 Feb;9(2):689-99

Department of Biomedical Sciences, Cancer Research Institute, and Genome Research Center for Diabetes and Endocrine Disease, Seoul National University College of Medicine, 28 Yongon-Dong, Seoul 110-799, Korea.

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http://dx.doi.org/10.1021/pr901013dDOI Listing
February 2010

Preparing multiple-reaction monitoring for quantitative clinical proteomics.

Expert Rev Proteomics 2009 Jun;6(3):225-9

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http://dx.doi.org/10.1586/epr.09.11DOI Listing
June 2009

Detection of differential proteomes of human beta-cells during islet-like differentiation using iTRAQ labeling.

J Proteome Res 2009 Mar;8(3):1393-403

Departments of Biomedical Sciences and Internal Medicine, Genome Research Center for Diabetes and Endocrine Disease, Seoul National University College of Medicine, 28 Yongon-Dong, Seoul 110-799, Korea.

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http://dx.doi.org/10.1021/pr800765tDOI Listing
March 2009

Crystal structure of the N-terminal domain of anaphase-promoting complex subunit 7.

J Biol Chem 2009 May 17;284(22):15137-46. Epub 2008 Dec 17.

Department of Biomedical Sciences and Cancer Research Institute, Seoul National University College of Medicine, 28 Yongon-Dong, Seoul 110-799, Korea.

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http://dx.doi.org/10.1074/jbc.M804887200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685695PMC
May 2009

O-GlcNAcylation disrupts glyceraldehyde-3-phosphate dehydrogenase homo-tetramer formation and mediates its nuclear translocation.

Biochim Biophys Acta 2009 Feb 31;1794(2):254-62. Epub 2008 Oct 31.

Department of Biomedical Sciences and Cancer Research Institute, Seoul National University College of Medicine, 28 Yongon-Dong, Chongno-Ku, Seoul 110-799 Republic of Korea.

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http://dx.doi.org/10.1016/j.bbapap.2008.10.003DOI Listing
February 2009

Profiling of vitreous proteomes from proliferative diabetic retinopathy and nondiabetic patients.

Proteomics 2007 Nov;7(22):4203-15

Department of Molecular Genomic Medicine, Seoul National University College of Medicine, Yongon-Dong, Seoul, Korea.

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http://dx.doi.org/10.1002/pmic.200700745DOI Listing
November 2007

Crystal structure of TTC0263, a thermophilic TPR protein from Thermus thermophilus HB27.

Mol Cells 2007 Aug;24(1):27-36

College of Medicine, Seoul National University, Seoul 110-799, Korea.

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August 2007

TPR domain of NrfG mediates complex formation between heme lyase and formate-dependent nitrite reductase in Escherichia coli O157:H7.

Proteins 2008 Feb;70(3):900-14

College of Medicine, Seoul National University, Yongon-Dong, Seoul 110-799, Korea.

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http://doi.wiley.com/10.1002/prot.21597
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http://dx.doi.org/10.1002/prot.21597DOI Listing
February 2008

Crystal structure of YrrB: a TPR protein with an unusual peptide-binding site.

Biochem Biophys Res Commun 2007 Sep 5;360(4):784-90. Epub 2007 Jul 5.

College of Medicine, Seoul National University, Yongon-Dong, Seoul 110-799, Republic of Korea.

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http://dx.doi.org/10.1016/j.bbrc.2007.06.129DOI Listing
September 2007

Crystal structure of PilF: functional implication in the type 4 pilus biogenesis in Pseudomonas aeruginosa.

Biochem Biophys Res Commun 2006 Feb 27;340(4):1028-38. Epub 2005 Dec 27.

Division of Molecular Genomic Medicine, College of Medicine, Seoul National University, Yongon-Dong, Seoul 110-799, Republic of Korea.

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http://dx.doi.org/10.1016/j.bbrc.2005.12.108DOI Listing
February 2006

Identification and purification of a soluble region of BubR1: a critical component of the mitotic checkpoint complex.

Protein Expr Purif 2005 Nov;44(1):1-9

Division of Molecular Genomic Medicine, College of Medicine, Seoul National University, Yongon-Dong, Seoul 110-799, Korea.

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http://dx.doi.org/10.1016/j.pep.2005.04.020DOI Listing
November 2005

Modifying the substrate specificity of penicillin G acylase to cephalosporin acylase by mutating active-site residues.

Biochem Biophys Res Commun 2004 Jun;319(2):486-92

Division of Molecular Genomic Medicine, College of Medicine, Seoul National University, Yongon-Dong, Seoul 110-799, Republic of Korea.

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http://dx.doi.org/10.1016/j.bbrc.2004.05.017DOI Listing
June 2004

A bound water molecule is crucial in initiating autocatalytic precursor activation in an N-terminal hydrolase.

J Biol Chem 2004 Jan 8;279(1):341-7. Epub 2003 Oct 8.

Division of Molecular Genomic Medicine, College of Medicine, Seoul National University, 28 Yongon-Dong, Seoul 110-799, Korea.

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http://www.jbc.org/content/early/2003/10/08/jbc.M309281200.f
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http://www.jbc.org/cgi/doi/10.1074/jbc.M309281200
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http://dx.doi.org/10.1074/jbc.M309281200DOI Listing
January 2004

Modifying the oligomeric state of cyclic amidase and its effect on enzymatic catalysis.

Biochem Biophys Res Commun 2003 Oct;310(2):651-9

Division of Molecular Genomic Medicine, College of Medicine, Seoul National University, Yongon-Dong, Seoul 110-799, South Korea.

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http://dx.doi.org/10.1016/j.bbrc.2003.09.056DOI Listing
October 2003