Publications by authors named "Krzysztof J Gorgolewski"

48Publications

Fine-grain atlases of functional modes for fMRI analysis.

Neuroimage 2020 Jul 13;221:117126. Epub 2020 Jul 13.

Inria, CEA, Université Paris-Saclay, Palaiseau, 91120, France; ENS, DMA, 45 Rue D'Ulm, 75005, Paris, France.

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http://dx.doi.org/10.1016/j.neuroimage.2020.117126DOI Listing
July 2020

Variability in the analysis of a single neuroimaging dataset by many teams.

Authors:
Rotem Botvinik-Nezer Felix Holzmeister Colin F Camerer Anna Dreber Juergen Huber Magnus Johannesson Michael Kirchler Roni Iwanir Jeanette A Mumford R Alison Adcock Paolo Avesani Blazej M Baczkowski Aahana Bajracharya Leah Bakst Sheryl Ball Marco Barilari Nadège Bault Derek Beaton Julia Beitner Roland G Benoit Ruud M W J Berkers Jamil P Bhanji Bharat B Biswal Sebastian Bobadilla-Suarez Tiago Bortolini Katherine L Bottenhorn Alexander Bowring Senne Braem Hayley R Brooks Emily G Brudner Cristian B Calderon Julia A Camilleri Jaime J Castrellon Luca Cecchetti Edna C Cieslik Zachary J Cole Olivier Collignon Robert W Cox William A Cunningham Stefan Czoschke Kamalaker Dadi Charles P Davis Alberto De Luca Mauricio R Delgado Lysia Demetriou Jeffrey B Dennison Xin Di Erin W Dickie Ekaterina Dobryakova Claire L Donnat Juergen Dukart Niall W Duncan Joke Durnez Amr Eed Simon B Eickhoff Andrew Erhart Laura Fontanesi G Matthew Fricke Shiguang Fu Adriana Galván Remi Gau Sarah Genon Tristan Glatard Enrico Glerean Jelle J Goeman Sergej A E Golowin Carlos González-García Krzysztof J Gorgolewski Cheryl L Grady Mikella A Green João F Guassi Moreira Olivia Guest Shabnam Hakimi J Paul Hamilton Roeland Hancock Giacomo Handjaras Bronson B Harry Colin Hawco Peer Herholz Gabrielle Herman Stephan Heunis Felix Hoffstaedter Jeremy Hogeveen Susan Holmes Chuan-Peng Hu Scott A Huettel Matthew E Hughes Vittorio Iacovella Alexandru D Iordan Peder M Isager Ayse I Isik Andrew Jahn Matthew R Johnson Tom Johnstone Michael J E Joseph Anthony C Juliano Joseph W Kable Michalis Kassinopoulos Cemal Koba Xiang-Zhen Kong Timothy R Koscik Nuri Erkut Kucukboyaci Brice A Kuhl Sebastian Kupek Angela R Laird Claus Lamm Robert Langner Nina Lauharatanahirun Hongmi Lee Sangil Lee Alexander Leemans Andrea Leo Elise Lesage Flora Li Monica Y C Li Phui Cheng Lim Evan N Lintz Schuyler W Liphardt Annabel B Losecaat Vermeer Bradley C Love Michael L Mack Norberto Malpica Theo Marins Camille Maumet Kelsey McDonald Joseph T McGuire Helena Melero Adriana S Méndez Leal Benjamin Meyer Kristin N Meyer Glad Mihai Georgios D Mitsis Jorge Moll Dylan M Nielson Gustav Nilsonne Michael P Notter Emanuele Olivetti Adrian I Onicas Paolo Papale Kaustubh R Patil Jonathan E Peelle Alexandre Pérez Doris Pischedda Jean-Baptiste Poline Yanina Prystauka Shruti Ray Patricia A Reuter-Lorenz Richard C Reynolds Emiliano Ricciardi Jenny R Rieck Anais M Rodriguez-Thompson Anthony Romyn Taylor Salo Gregory R Samanez-Larkin Emilio Sanz-Morales Margaret L Schlichting Douglas H Schultz Qiang Shen Margaret A Sheridan Jennifer A Silvers Kenny Skagerlund Alec Smith David V Smith Peter Sokol-Hessner Simon R Steinkamp Sarah M Tashjian Bertrand Thirion John N Thorp Gustav Tinghög Loreen Tisdall Steven H Tompson Claudio Toro-Serey Juan Jesus Torre Tresols Leonardo Tozzi Vuong Truong Luca Turella Anna E van 't Veer Tom Verguts Jean M Vettel Sagana Vijayarajah Khoi Vo Matthew B Wall Wouter D Weeda Susanne Weis David J White David Wisniewski Alba Xifra-Porxas Emily A Yearling Sangsuk Yoon Rui Yuan Kenneth S L Yuen Lei Zhang Xu Zhang Joshua E Zosky Thomas E Nichols Russell A Poldrack Tom Schonberg

Nature 2020 06 20;582(7810):84-88. Epub 2020 May 20.

Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel.

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http://dx.doi.org/10.1038/s41586-020-2314-9DOI Listing
June 2020

EEG-BIDS, an extension to the brain imaging data structure for electroencephalography.

Sci Data 2019 06 25;6(1):103. Epub 2019 Jun 25.

Donders Institute for Brain, Cognition and Behaviour, Radboud University, Nijmegen, The Netherlands.

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http://dx.doi.org/10.1038/s41597-019-0104-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6592877PMC
June 2019

A mind-brain-body dataset of MRI, EEG, cognition, emotion, and peripheral physiology in young and old adults.

Sci Data 2019 02 12;6:180308. Epub 2019 Feb 12.

Department of Neurology, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.

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http://dx.doi.org/10.1038/sdata.2018.308DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371893PMC
February 2019

Switching Software in Science: Motivations, Challenges, and Solutions.

Trends Cogn Sci 2019 04 31;23(4):265-267. Epub 2019 Jan 31.

Centre de Recherche, Institut Universitaire de Gériatrie de Montréal, Université de Montréal, Montréal, QC, Canada; Psychology Department, University of Montreal, Montreal, Canada; All authors contributed equally to this article. Electronic address:

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http://dx.doi.org/10.1016/j.tics.2019.01.004DOI Listing
April 2019

Reward Learning over Weeks Versus Minutes Increases the Neural Representation of Value in the Human Brain.

J Neurosci 2018 08 30;38(35):7649-7666. Epub 2018 Jul 30.

Department of Psychology, Stanford University, Stanford, California, 94305.

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http://dx.doi.org/10.1523/JNEUROSCI.0075-18.2018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6113901PMC
August 2018

Making replication prestigious.

Behav Brain Sci 2018 01;41:e131

Department of Psychology,Stanford University,Stanford, CA

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http://dx.doi.org/10.1017/S0140525X18000663DOI Listing
January 2018

Preprocessed Consortium for Neuropsychiatric Phenomics dataset.

F1000Res 2017 28;6:1262. Epub 2017 Jul 28.

Department of Psychology, Stanford University, Stanford, CA, USA.

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http://dx.doi.org/10.12688/f1000research.11964.2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5664981PMC
July 2017

Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.

PLoS Comput Biol 2017 Oct 23;13(10):e1005649. Epub 2017 Oct 23.

Department of Psychology, University of Texas at Austin, Austin, TX, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.1005649DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5683652PMC
October 2017

MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sites.

PLoS One 2017 25;12(9):e0184661. Epub 2017 Sep 25.

Department of Psychology, Stanford University, Stanford, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0184661PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5612458PMC
October 2017

A Practical Guide for Improving Transparency and Reproducibility in Neuroimaging Research.

PLoS Biol 2016 07 7;14(7):e1002506. Epub 2016 Jul 7.

Department of Psychology, Stanford University, Stanford, California, United States of America.

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http://dx.doi.org/10.1371/journal.pbio.1002506DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4936733PMC
July 2016

A structural and functional magnetic resonance imaging dataset of brain tumour patients.

Sci Data 2016 Feb 2;3:160003. Epub 2016 Feb 2.

Brain Research Imaging Centre, The University of Edinburgh, Edinburgh EH4 2XU, UK.

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http://dx.doi.org/10.1038/sdata.2016.3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4736501PMC
February 2016

Evaluation of a pre-surgical functional MRI workflow: From data acquisition to reporting.

Int J Med Inform 2016 Feb 30;86:37-42. Epub 2015 Nov 30.

Brain Research Imaging Centre, The University of Edinburgh, UK; Centre for Clinical Brain Sciences, The University of Edinburgh, UK.

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http://dx.doi.org/10.1016/j.ijmedinf.2015.11.014DOI Listing
February 2016

Effects of thresholding on correlation-based image similarity metrics.

Front Neurosci 2015 29;9:418. Epub 2015 Oct 29.

Poldrack Lab, Department of Psychology, Stanford University Stanford, CA, USA.

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http://dx.doi.org/10.3389/fnins.2015.00418DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4625081PMC
November 2015

Estimation of dynamic functional connectivity using Multiplication of Temporal Derivatives.

Neuroimage 2015 Nov 29;122:399-407. Epub 2015 Jul 29.

Department of Psychology, Stanford University, Stanford, CA, USA.

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http://dx.doi.org/10.1016/j.neuroimage.2015.07.064DOI Listing
November 2015

The human voice areas: Spatial organization and inter-individual variability in temporal and extra-temporal cortices.

Neuroimage 2015 Oct 24;119:164-74. Epub 2015 Jun 24.

Institute of Neuroscience and Psychology, University of Glasgow, United Kingdom; Institut des Neurosciences de La Timone, UMR 7289, CNRS & Université Aix-Marseille, France; Département de Psychologie, Université de Montréal, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.neuroimage.2015.06.050DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4768083PMC
October 2015

OpenfMRI: Open sharing of task fMRI data.

Neuroimage 2017 01 3;144(Pt B):259-261. Epub 2015 Jun 3.

Department of Psychology, Stanford University, Stanford CA, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S10538119150046
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http://dx.doi.org/10.1016/j.neuroimage.2015.05.073DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4669234PMC
January 2017

Making big data open: data sharing in neuroimaging.

Nat Neurosci 2014 Nov 28;17(11):1510-7. Epub 2014 Oct 28.

1] Department of Psychology, Stanford Univeristy, Stanford, California, USA. [2] Max Planck Research Group Neuroanatomy and Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.

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http://dx.doi.org/10.1038/nn.3818DOI Listing
November 2014

Dynamic network participation of functional connectivity hubs assessed by resting-state fMRI.

Front Hum Neurosci 2014 6;8:195. Epub 2014 May 6.

Department of Neurology, Max Planck Institute for Human Cognitive and Brain Sciences Leipzig, Germany ; Berlin School of Mind and Brain, Mind and Brain Institute Berlin, Germany ; Department of Cognitive Neurology, University Hospital Leipzig Leipzig, Germany ; Center for Stroke Research, Charité - Universitätsmedizin Berlin, Germany.

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http://dx.doi.org/10.3389/fnhum.2014.00195DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4018560PMC
May 2014

An open science resource for establishing reliability and reproducibility in functional connectomics.

Sci Data 2014 9;1:140049. Epub 2014 Dec 9.

Nathan S. Kline Institute for Psychiatric Research , Orangeburg, New York 10962, USA ; Center for the Developing Brain, Child Mind Institute , New York, New York 10022, USA.

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http://dx.doi.org/10.1038/sdata.2014.49DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4421932PMC
December 2015

Medial and lateral networks in anterior prefrontal cortex support metacognitive ability for memory and perception.

J Neurosci 2013 Oct;33(42):16657-65

Department of Psychological and Brain Sciences, University of California, Santa Barbara, California 93106, Department of Psychology, University of York, North Yorkshire YO10 5DD, United Kingdom, and Max Planck Research Group: Neuroanatomy & Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, 04103, Leipzig, Germany.

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http://dx.doi.org/10.1523/JNEUROSCI.0786-13.2013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6618531PMC
October 2013

Test-retest reliability of structural brain networks from diffusion MRI.

Neuroimage 2014 Feb 2;86:231-43. Epub 2013 Oct 2.

Centre for Clinical Brain Sciences, University of Edinburgh, Edinburgh, UK; Brain Research Imaging Centre, Neuroimaging Sciences, University of Edinburgh, Edinburgh, UK. Electronic address:

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http://dx.doi.org/10.1016/j.neuroimage.2013.09.054DOI Listing
February 2014

Visualizing the human connectome.

Neuroimage 2013 Oct 6;80:445-61. Epub 2013 May 6.

Max Planck Research Group, Neuroanatomy & Connectivity, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.

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http://dx.doi.org/10.1016/j.neuroimage.2013.04.111DOI Listing
October 2013

A test-retest fMRI dataset for motor, language and spatial attention functions.

Gigascience 2013 Apr 29;2(1). Epub 2013 Apr 29.

Institute for Adaptive and Neural Computation, University of Edinburgh, 10 Crichton Street, Edinburgh, EH8 9AB, UK.

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http://dx.doi.org/10.1186/2047-217X-2-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3641991PMC
April 2013

Making data sharing count: a publication-based solution.

Front Neurosci 2013 6;7. Epub 2013 Feb 6.

Max Planck Institute for Cognitive and Brain Sciences Leipzig, Germany.

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http://dx.doi.org/10.3389/fnins.2013.00009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3565154PMC
February 2013

Single subject fMRI test-retest reliability metrics and confounding factors.

Neuroimage 2013 Apr 13;69:231-43. Epub 2012 Nov 13.

Neuroinformatics Doctoral Training Centre, University of Edinburgh, UK.

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http://dx.doi.org/10.1016/j.neuroimage.2012.10.085DOI Listing
April 2013

Adaptive thresholding for reliable topological inference in single subject fMRI analysis.

Front Hum Neurosci 2012 25;6:245. Epub 2012 Aug 25.

School of Informatics, Nauroinformatics and Computational Neuroscience Doctoral Training Centre, University of Edinburgh Edinburgh, UK.

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http://dx.doi.org/10.3389/fnhum.2012.00245DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3427544PMC
October 2012