Publications by authors named "Krishna R Veeramah"

38Publications

Co-option of the lineage-specific retrotransposon in the gibbon genome.

Proc Natl Acad Sci U S A 2020 08 20;117(32):19328-19338. Epub 2020 Jul 20.

Department of Medicine, Knight Cardiovascular Institute, Oregon Health and Science University, Portland, OR 97239;

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http://dx.doi.org/10.1073/pnas.2006038117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7431028PMC
August 2020

The Role of Phylogenetically Conserved Elements in Shaping Patterns of Human Genomic Diversity.

Mol Biol Evol 2018 09;35(9):2284-2295

ARL Division of Biotechnology, University of Arizona, Tucson, AZ.

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http://dx.doi.org/10.1093/molbev/msy145DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6107059PMC
September 2018

The importance of fine-scale studies for integrating paleogenomics and archaeology.

Curr Opin Genet Dev 2018 12 3;53:83-89. Epub 2018 Aug 3.

Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY 11790, USA. Electronic address:

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http://dx.doi.org/10.1016/j.gde.2018.07.007DOI Listing
December 2018

Whole-genome sequence analyses of Western Central African Pygmy hunter-gatherers reveal a complex demographic history and identify candidate genes under positive natural selection.

Genome Res 2016 Mar 17;26(3):279-90. Epub 2016 Feb 17.

Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona 85721, USA; Department of Molecular and Cellular Biology, University of Arizona, Tucson, Arizona 85721, USA.

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http://dx.doi.org/10.1101/gr.192971.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4772011PMC
March 2016

The Time Scale of Recombination Rate Evolution in Great Apes.

Mol Biol Evol 2016 Apr 15;33(4):928-45. Epub 2015 Dec 15.

Institute for Human Genetics, University of California San Francisco Department of Epidemiology & Biostatistics, University of California San Francisco

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http://dx.doi.org/10.1093/molbev/msv331DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5870646PMC
April 2016

Extreme selective sweeps independently targeted the X chromosomes of the great apes.

Proc Natl Acad Sci U S A 2015 May 4;112(20):6413-8. Epub 2015 May 4.

Bioinformatics Research Centre and Department of Bioscience, Aarhus University, Aarhus 8000, Denmark;

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http://dx.doi.org/10.1073/pnas.1419306112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4443357PMC
May 2015

A recent bottleneck of Y chromosome diversity coincides with a global change in culture.

Authors:
Monika Karmin Lauri Saag Mário Vicente Melissa A Wilson Sayres Mari Järve Ulvi Gerst Talas Siiri Rootsi Anne-Mai Ilumäe Reedik Mägi Mario Mitt Luca Pagani Tarmo Puurand Zuzana Faltyskova Florian Clemente Alexia Cardona Ene Metspalu Hovhannes Sahakyan Bayazit Yunusbayev Georgi Hudjashov Michael DeGiorgio Eva-Liis Loogväli Christina Eichstaedt Mikk Eelmets Gyaneshwer Chaubey Kristiina Tambets Sergei Litvinov Maru Mormina Yali Xue Qasim Ayub Grigor Zoraqi Thorfinn Sand Korneliussen Farida Akhatova Joseph Lachance Sarah Tishkoff Kuvat Momynaliev François-Xavier Ricaut Pradiptajati Kusuma Harilanto Razafindrazaka Denis Pierron Murray P Cox Gazi Nurun Nahar Sultana Rane Willerslev Craig Muller Michael Westaway David Lambert Vedrana Skaro Lejla Kovačevic Shahlo Turdikulova Dilbar Dalimova Rita Khusainova Natalya Trofimova Vita Akhmetova Irina Khidiyatova Daria V Lichman Jainagul Isakova Elvira Pocheshkhova Zhaxylyk Sabitov Nikolay A Barashkov Pagbajabyn Nymadawa Evelin Mihailov Joseph Wee Tien Seng Irina Evseeva Andrea Bamberg Migliano Syafiq Abdullah George Andriadze Dragan Primorac Lubov Atramentova Olga Utevska Levon Yepiskoposyan Damir Marjanovic Alena Kushniarevich Doron M Behar Christian Gilissen Lisenka Vissers Joris A Veltman Elena Balanovska Miroslava Derenko Boris Malyarchuk Andres Metspalu Sardana Fedorova Anders Eriksson Andrea Manica Fernando L Mendez Tatiana M Karafet Krishna R Veeramah Neil Bradman Michael F Hammer Ludmila P Osipova Oleg Balanovsky Elza K Khusnutdinova Knut Johnsen Maido Remm Mark G Thomas Chris Tyler-Smith Peter A Underhill Eske Willerslev Rasmus Nielsen Mait Metspalu Richard Villems Toomas Kivisild

Genome Res 2015 Apr 13;25(4):459-66. Epub 2015 Mar 13.

Estonian Biocentre, Tartu, 51010, Estonia; Division of Biological Anthropology, University of Cambridge, Cambridge, CB2 1QH, United Kingdom;

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https://bib.irb.hr/datoteka/715300.2015_Genome_Res._Karmin-A
Web Search
http://genome.cshlp.org/lookup/doi/10.1101/gr.186684.114
Publisher Site
http://dx.doi.org/10.1101/gr.186684.114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4381518PMC
April 2015

Reply to 'The 'extremely ancient' chromosome that isn't' by Elhaik et al.

Eur J Hum Genet 2015 May 15;23(5):564-7. Epub 2014 Oct 15.

ARL Division of Biotechnology, University of Arizona, Tucson, AZ, USA.

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http://dx.doi.org/10.1038/ejhg.2014.148DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4402626PMC
May 2015

Gibbon genome and the fast karyotype evolution of small apes.

Nature 2014 Sep;513(7517):195-201

Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030, USA.

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http://dx.doi.org/10.1038/nature13679DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4249732PMC
September 2014

Demographic events and evolutionary forces shaping European genetic diversity.

Cold Spring Harb Perspect Biol 2014 Jul 24;6(9):a008516. Epub 2014 Jul 24.

Department of Human Genetics, University of Chicago, Chicago, Illinois 60637.

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http://dx.doi.org/10.1101/cshperspect.a008516DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4142961PMC
July 2014

Evidence for increased levels of positive and negative selection on the X chromosome versus autosomes in humans.

Mol Biol Evol 2014 Sep 15;31(9):2267-82. Epub 2014 May 15.

Arizona Research Laboratories Division of Biotechnology, University of Arizona

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http://dx.doi.org/10.1093/molbev/msu166DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4137703PMC
September 2014

The impact of whole-genome sequencing on the reconstruction of human population history.

Nat Rev Genet 2014 Mar 4;15(3):149-62. Epub 2014 Feb 4.

Arizona Research Laboratories Division of Biotechnology, Room 231, Life Sciences South, 1007 East Lowell Street, University of Arizona, Tucson, Arizona 85721, USA.

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http://dx.doi.org/10.1038/nrg3625DOI Listing
March 2014

Multistate structural modeling and voltage-clamp analysis of epilepsy/autism mutation Kv10.2-R327H demonstrate the role of this residue in stabilizing the channel closed state.

J Neurosci 2013 Oct;33(42):16586-93

Department of Neurology and Center for Neuroscience and Regeneration Research, Yale University School of Medicine, New Haven, Connecticut 06510, Rehabilitation Research Center, Veterans Affairs Connecticut Healthcare System, West Haven, Connecticut 06516, and Arizona Research Laboratories Division of Biotechnology, University of Arizona, Tucson, Arizona 85721.

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http://dx.doi.org/10.1523/JNEUROSCI.2307-13.2013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6618534PMC
October 2013

Great ape genetic diversity and population history.

Nature 2013 Jul 3;499(7459):471-5. Epub 2013 Jul 3.

Institut de Biologia Evolutiva, CSIC-Universitat Pompeu Fabra, PRBB, Doctor Aiguader 88, Barcelona, Catalonia 08003, Spain.

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http://dx.doi.org/10.1038/nature12228DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3822165PMC
July 2013

The KCNJ8-S422L variant previously associated with J-wave syndromes is found at an increased frequency in Ashkenazi Jews.

Eur J Hum Genet 2014 Jan 1;22(1):94-8. Epub 2013 May 1.

Division of Biotechnology, Arizona Research Laboratories, University of Arizona, Tucson, AZ, USA.

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http://dx.doi.org/10.1038/ejhg.2013.78DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3865407PMC
January 2014

Genetic variation in the Sorbs of eastern Germany in the context of broader European genetic diversity.

Eur J Hum Genet 2011 Sep 11;19(9):995-1001. Epub 2011 May 11.

Department of Eco & Evo Biol, Interdepartmental Program in Bioinformatics, University of California, Los Angeles, CA, USA.

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http://dx.doi.org/10.1038/ejhg.2011.65DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3179365PMC
September 2011

Sex-Specific Genetic Data Support One of Two Alternative Versions of the Foundation of the Ruling Dynasty of the Nso' in Cameroon.

Curr Anthropol 2008 Aug;49(4):707-714

The Centre for Genetic Anthropology, Research Department of Genetics, Evolution and Environment, University College London, Gower Street, London WC1E 6BT, UK (Veeramah, Bradman)/Department of Anthropology, University of Kent, Canterbury CT2 7NR, UK ( ) (Zeitlyn)/Department of History, University of Yaoundé 1, Cameroon (Fanso)/Department of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794, U.S.A. (Mendell)/Centre for Research on Language Contact, Glendon College, York University, Toronto, Ontario M4N 3N6, Canada (Connell)/Department of Medical and Molecular Genetics, King's College London, Guy's Tower, Guy's Hospital, London SE1 9RT, UK (Weale)/Research Department of Genetics, Evolution and Environment, University College London, Gower Street, London WC1E 6BT, UK (Thomas). 21 III 08.

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http://dx.doi.org/10.1086/590119DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2600431PMC
August 2008