Publications by authors named "Klaus F X Mayer"

100Publications

The Systems Architecture of Molecular Memory in Poplar after Abiotic Stress.

Plant Cell 2019 02 31;31(2):346-367. Epub 2019 Jan 31.

Research Unit Environmental Simulation, Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, 85764 Neuherberg, Germany

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http://www.plantcell.org/lookup/doi/10.1105/tpc.18.00431
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http://dx.doi.org/10.1105/tpc.18.00431DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6447019PMC
February 2019

A promiscuous beta-glucosidase is involved in benzoxazinoid deglycosylation in Lamium galeobdolon.

Phytochemistry 2018 Dec 15;156:224-233. Epub 2018 Oct 15.

Chair of Plant Breeding, Technical University of Munich, Liesel-Beckmann-Str. 2, D-85354, Freising, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.phytochem.2018.10.012DOI Listing
December 2018

Shifting the limits in wheat research and breeding using a fully annotated reference genome.

Authors:
Rudi Appels Kellye Eversole Catherine Feuillet Beat Keller Jane Rogers Nils Stein Curtis J Pozniak Nils Stein Frédéric Choulet Assaf Distelfeld Kellye Eversole Jesse Poland Jane Rogers Gil Ronen Andrew G Sharpe Curtis Pozniak Gil Ronen Nils Stein Omer Barad Kobi Baruch Frédéric Choulet Gabriel Keeble-Gagnère Martin Mascher Andrew G Sharpe Gil Ben-Zvi Ambre-Aurore Josselin Nils Stein Martin Mascher Axel Himmelbach Frédéric Choulet Gabriel Keeble-Gagnère Martin Mascher Jane Rogers François Balfourier Juan Gutierrez-Gonzalez Matthew Hayden Ambre-Aurore Josselin ChuShin Koh Gary Muehlbauer Raj K Pasam Etienne Paux Curtis J Pozniak Philippe Rigault Andrew G Sharpe Josquin Tibbits Vijay Tiwari Frédéric Choulet Gabriel Keeble-Gagnère Martin Mascher Ambre-Aurore Josselin Jane Rogers Manuel Spannagl Frédéric Choulet Daniel Lang Heidrun Gundlach Georg Haberer Gabriel Keeble-Gagnère Klaus F X Mayer Danara Ormanbekova Etienne Paux Verena Prade Hana Šimková Thomas Wicker Frédéric Choulet Manuel Spannagl David Swarbreck Hélène Rimbert Marius Felder Nicolas Guilhot Heidrun Gundlach Georg Haberer Gemy Kaithakottil Jens Keilwagen Daniel Lang Philippe Leroy Thomas Lux Klaus F X Mayer Sven Twardziok Luca Venturini Rudi Appels Hélène Rimbert Frédéric Choulet Angéla Juhász Gabriel Keeble-Gagnère Frédéric Choulet Manuel Spannagl Daniel Lang Michael Abrouk Georg Haberer Gabriel Keeble-Gagnère Klaus F X Mayer Thomas Wicker Frédéric Choulet Thomas Wicker Heidrun Gundlach Daniel Lang Manuel Spannagl Daniel Lang Manuel Spannagl Rudi Appels Iris Fischer Cristobal Uauy Philippa Borrill Ricardo H Ramirez-Gonzalez Rudi Appels Dominique Arnaud Smahane Chalabi Boulos Chalhoub Frédéric Choulet Aron Cory Raju Datla Mark W Davey Matthew Hayden John Jacobs Daniel Lang Stephen J Robinson Manuel Spannagl Burkhard Steuernagel Josquin Tibbits Vijay Tiwari Fred van Ex Brande B H Wulff Curtis J Pozniak Stephen J Robinson Andrew G Sharpe Aron Cory Moussa Benhamed Etienne Paux Abdelhafid Bendahmane Lorenzo Concia David Latrasse Jane Rogers John Jacobs Michael Alaux Rudi Appels Jan Bartoš Arnaud Bellec Hélène Berges Jaroslav Doležel Catherine Feuillet Zeev Frenkel Bikram Gill Abraham Korol Thomas Letellier Odd-Arne Olsen Hana Šimková Kuldeep Singh Miroslav Valárik Edwin van der Vossen Sonia Vautrin Song Weining Abraham Korol Zeev Frenkel Tzion Fahima Vladimir Glikson Dina Raats Jane Rogers Vijay Tiwari Bikram Gill Etienne Paux Jesse Poland Jaroslav Doležel Jarmila Číhalíková Hana Šimková Helena Toegelová Jan Vrána Pierre Sourdille Benoit Darrier Rudi Appels Manuel Spannagl Daniel Lang Iris Fischer Danara Ormanbekova Verena Prade Delfina Barabaschi Luigi Cattivelli Pilar Hernandez Sergio Galvez Hikmet Budak Burkhard Steuernagel Jonathan D G Jones Kamil Witek Brande B H Wulff Guotai Yu Ian Small Joanna Melonek Ruonan Zhou Angéla Juhász Tatiana Belova Rudi Appels Odd-Arne Olsen Kostya Kanyuka Robert King Kirby Nilsen Sean Walkowiak Curtis J Pozniak Richard Cuthbert Raju Datla Ron Knox Krysta Wiebe Daoquan Xiang Antje Rohde Timothy Golds Jaroslav Doležel Jana Čížková Josquin Tibbits Hikmet Budak Bala Ani Akpinar Sezgi Biyiklioglu Gary Muehlbauer Jesse Poland Liangliang Gao Juan Gutierrez-Gonzalez Amidou N'Daiye Jaroslav Doležel Hana Šimková Jarmila Číhalíková Marie Kubaláková Jan Šafář Jan Vrána Hélène Berges Arnaud Bellec Sonia Vautrin Michael Alaux Françoise Alfama Anne-Françoise Adam-Blondon Raphael Flores Claire Guerche Thomas Letellier Mikaël Loaec Hadi Quesneville Curtis J Pozniak Andrew G Sharpe Sean Walkowiak Hikmet Budak Janet Condie Jennifer Ens ChuShin Koh Ron Maclachlan Yifang Tan Thomas Wicker Frédéric Choulet Etienne Paux Adriana Alberti Jean-Marc Aury François Balfourier Valérie Barbe Arnaud Couloux Corinne Cruaud Karine Labadie Sophie Mangenot Patrick Wincker Bikram Gill Gaganpreet Kaur Mingcheng Luo Sunish Sehgal Kuldeep Singh Parveen Chhuneja Om Prakash Gupta Suruchi Jindal Parampreet Kaur Palvi Malik Priti Sharma Bharat Yadav Nagendra K Singh JitendraP Khurana Chanderkant Chaudhary Paramjit Khurana Vinod Kumar Ajay Mahato Saloni Mathur Amitha Sevanthi Naveen Sharma Ram Sewak Tomar Jane Rogers John Jacobs Michael Alaux Arnaud Bellec Hélène Berges Jaroslav Doležel Catherine Feuillet Zeev Frenkel Bikram Gill Abraham Korol Edwin van der Vossen Sonia Vautrin Bikram Gill Gaganpreet Kaur Mingcheng Luo Sunish Sehgal Jan Bartoš Kateřina Holušová Ondřej Plíhal Matthew D Clark Darren Heavens George Kettleborough Jon Wright Miroslav Valárik Michael Abrouk Barbora Balcárková Kateřina Holušová Yuqin Hu Mingcheng Luo Elena Salina Nikolai Ravin Konstantin Skryabin Alexey Beletsky Vitaly Kadnikov Andrey Mardanov Michail Nesterov Andrey Rakitin Ekaterina Sergeeva Hirokazu Handa Hiroyuki Kanamori Satoshi Katagiri Fuminori Kobayashi Shuhei Nasuda Tsuyoshi Tanaka Jianzhong Wu Rudi Appels Matthew Hayden Gabriel Keeble-Gagnère Philippe Rigault Josquin Tibbits Odd-Arne Olsen Tatiana Belova Federica Cattonaro Min Jiumeng Karl Kugler Klaus F X Mayer Matthias Pfeifer Simen Sandve Xu Xun Bujie Zhan Hana Šimková Michael Abrouk Jacqueline Batley Philipp E Bayer David Edwards Satomi Hayashi Helena Toegelová Zuzana Tulpová Paul Visendi Song Weining Licao Cui Xianghong Du Kewei Feng Xiaojun Nie Wei Tong Le Wang Philippa Borrill Heidrun Gundlach Sergio Galvez Gemy Kaithakottil Daniel Lang Thomas Lux Martin Mascher Danara Ormanbekova Verena Prade Ricardo H Ramirez-Gonzalez Manuel Spannagl Nils Stein Cristobal Uauy Luca Venturini Nils Stein Rudi Appels Kellye Eversole Jane Rogers Philippa Borrill Luigi Cattivelli Frédéric Choulet Pilar Hernandez Kostya Kanyuka Daniel Lang Martin Mascher Kirby Nilsen Etienne Paux Curtis J Pozniak Ricardo H Ramirez-Gonzalez Hana Šimková Ian Small Manuel Spannagl David Swarbreck Cristobal Uauy

Science 2018 08 16;361(6403). Epub 2018 Aug 16.

John Innes Centre, Crop Genetics, Norwich Research Park, Norwich NR4 7UH, UK.

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http://dx.doi.org/10.1126/science.aar7191DOI Listing
August 2018

The repetitive landscape of the 5100 Mbp barley genome.

Mob DNA 2017 20;8:22. Epub 2017 Dec 20.

PGSB - Plant Genome and Systems Biology, Helmholtz Center Munich - German Research Center for Environmental Health, Neuherberg, Germany.

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http://dx.doi.org/10.1186/s13100-017-0102-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5738225PMC
December 2017

The pseudogenes of barley.

Plant J 2018 02 7;93(3):502-514. Epub 2018 Jan 7.

Plant Genome and Systems Biology, Helmholtz Center Munich - German Research Center for Environmental Health, Ingolstädter Landstraße 1, 85764, Neuherberg, Germany.

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http://dx.doi.org/10.1111/tpj.13794DOI Listing
February 2018

Bioinformatics in the plant genomic and phenomic domain: The German contribution to resources, services and perspectives.

J Biotechnol 2017 Nov 8;261:37-45. Epub 2017 Jul 8.

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Corrensstraße 3, 06466 Seeland, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.jbiotec.2017.07.006DOI Listing
November 2017

Time-course expression QTL-atlas of the global transcriptional response of wheat to Fusarium graminearum.

Plant Biotechnol J 2017 Nov 21;15(11):1453-1464. Epub 2017 Apr 21.

Institute for Biotechnology in Plant Production (IFA-Tulln), BOKU - University of Natural Resources and Life Sciences, Tulln, Austria.

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http://doi.wiley.com/10.1111/pbi.12729
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http://dx.doi.org/10.1111/pbi.12729DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5633761PMC
November 2017

PGSB/MIPS PlantsDB Database Framework for the Integration and Analysis of Plant Genome Data.

Methods Mol Biol 2017 ;1533:33-44

Plant Genome and Systems Biology, Helmholtz Center Munich, Ingolstaedter Landstr. 1, 85764, Neuherberg, Germany.

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http://dx.doi.org/10.1007/978-1-4939-6658-5_2DOI Listing
January 2018

Towards a whole-genome sequence for rye (Secale cereale L.).

Plant J 2017 Mar 8;89(5):853-869. Epub 2017 Feb 8.

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Corrensstr. 3, 06466, Stadt Seeland, Germany.

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http://dx.doi.org/10.1111/tpj.13436DOI Listing
March 2017

Brassinosteroids participate in the control of basal and acquired freezing tolerance of plants.

Proc Natl Acad Sci U S A 2016 10 21;113(40):E5982-E5991. Epub 2016 Sep 21.

Biotechnology of Horticultural Crops, Technische Universität München (TUM) School for Life Sciences Weihenstephan, TUM, D-85354 Freising, Germany;

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http://dx.doi.org/10.1073/pnas.1611477113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5056081PMC
October 2016

Multiplex sequencing of bacterial artificial chromosomes for assembling complex plant genomes.

Plant Biotechnol J 2016 07 23;14(7):1511-22. Epub 2016 Jan 23.

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Stadt Seeland, Germany.

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http://dx.doi.org/10.1111/pbi.12511DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5066668PMC
July 2016

Identification and Characterization of Carboxylesterases from Brachypodium distachyon Deacetylating Trichothecene Mycotoxins.

Toxins (Basel) 2015 Dec 25;8(1). Epub 2015 Dec 25.

Department of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences, Vienna (BOKU), Konrad-Lorenz-Strasse 24, 3430 Tulln, Austria.

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http://dx.doi.org/10.3390/toxins8010006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4728528PMC
December 2015

Parallel Selection Revealed by Population Sequencing in Chicken.

Genome Biol Evol 2015 Nov 13;7(12):3299-306. Epub 2015 Nov 13.

Animal Breeding and Genetics Group, Georg-August University, Göttingen, Germany.

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http://dx.doi.org/10.1093/gbe/evv222DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4700953PMC
November 2015

PGSB PlantsDB: updates to the database framework for comparative plant genome research.

Nucleic Acids Res 2016 Jan 2;44(D1):D1141-7. Epub 2015 Nov 2.

Plant Genome and Systems Biology, Helmholtz Center Munich - German Research Center for Environmental Health, 85764 Neuherberg, Germany.

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http://dx.doi.org/10.1093/nar/gkv1130DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702821PMC
January 2016

PGSB/MIPS Plant Genome Information Resources and Concepts for the Analysis of Complex Grass Genomes.

Methods Mol Biol 2016 ;1374:165-86

Plant Genome and Systems Biology, Helmholtz Center Munich, Ingolstaedter Landstr. 1, 85764, Neuherberg, Germany.

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http://dx.doi.org/10.1007/978-1-4939-3167-5_8DOI Listing
May 2016

Barley: From Brittle to Stable Harvest.

Cell 2015 Jul;162(3):469-71

Plant Genome and Systems Biology, Helmholtz Center Munich, 85764 Neuherberg, Germany; School of Life Sciences Weihenstephan, Technical University Munich, 85354 Freising, Germany; College of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2015.07.023DOI Listing
July 2015

DroughtDB: an expert-curated compilation of plant drought stress genes and their homologs in nine species.

Database (Oxford) 2015 15;2015:bav046. Epub 2015 May 15.

Plant Breeding, Center of Life and Food Sciences Weihenstephan, Technische Universität München, 85354 Freising, Germany, Department of Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, 85764 Neuherberg, Germany and College of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia Plant Breeding, Center of Life and Food Sciences Weihenstephan, Technische Universität München, 85354 Freising, Germany, Department of Plant Genome and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, 85764 Neuherberg, Germany and College of Science, King Saud University, Riyadh 11451, Kingdom of Saudi Arabia

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https://academic.oup.com/database/article/doi/10.1093/databa
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http://dx.doi.org/10.1093/database/bav046DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433318PMC
December 2015

A Genome-Wide Survey of Date Palm Cultivars Supports Two Major Subpopulations in Phoenix dactylifera.

G3 (Bethesda) 2015 May 8;5(7):1429-38. Epub 2015 May 8.

Genomics Laboratory, Weill Cornell Medical College in Qatar, Qatar Foundation, 24144 Doha, Qatar Department of Genetic Medicine, Weill Cornell Medical College in Qatar, Qatar Foundation, 24144 Doha, Qatar Weill Cornell Medical College in Qatar, Qatar Foundation, 24144 Doha, Qatar

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http://dx.doi.org/10.1534/g3.115.018341DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4502377PMC
May 2015

Comparative transcriptome analysis within the Lolium/Festuca species complex reveals high sequence conservation.

BMC Genomics 2015 Mar 28;16:249. Epub 2015 Mar 28.

Department of Molecular Biology and Genetics, Aarhus University, Forsøgsvej 1, Slagelse, 4200, Denmark.

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http://dx.doi.org/10.1186/s12864-015-1447-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4389671PMC
March 2015

New insights into the wheat chromosome 4D structure and virtual gene order, revealed by survey pyrosequencing.

Plant Sci 2015 Apr 18;233:200-212. Epub 2014 Dec 18.

CERZOS (Centro de Recursos Naturales Renovables de la Zona Semiárida), (CCT-CONICET-Bahía Blanca) and Universidad Nacional del Sur, Bahía Blanca, Buenos Aires, Argentina. Electronic address:

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http://dx.doi.org/10.1016/j.plantsci.2014.12.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4352925PMC
April 2015

Genes on B chromosomes: old questions revisited with new tools.

Biochim Biophys Acta 2015 Jan 3;1849(1):64-70. Epub 2014 Dec 3.

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Corrensstr. 3, 06466 Stadt Seeland, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.bbagrm.2014.11.007DOI Listing
January 2015

Bacteria-triggered systemic immunity in barley is associated with WRKY and ETHYLENE RESPONSIVE FACTORs but not with salicylic acid.

Plant Physiol 2014 Dec 20;166(4):2133-51. Epub 2014 Oct 20.

Helmholtz Zentrum Muenchen, Department of Environmental Sciences, Institute of Biochemical Plant Pathology (S.D., M.W., C.K., M.B., A.C.V.) and Research Unit Plant Genome and Systems Biology (S.S., K.G.K., K.F.X.M.), 85764 Neuherberg, Germany;Justus Liebig University, Research Centre for BioSystems, Land Use, and Nutrition, 35392 Giessen, Germany (G.L., V.B., J.I., K.-H.K.);Leibniz Institute of Plant Biochemistry, Department of Cell and Metabolic Biology, 06120 Halle/Saale, Germany (B.H.);Plant Sciences, Institute for Biosciences and Geosciences, Forschungszentrum Jülich, 52425 Juelich, Germany (I.J.);University of Regensburg, Center of Excellence for Fluorescent Bioanalytics, 93053 Regensburg, Germany (T.S.); andTechnische Universität München, Department of Phytopathology, 85350 Freising, Germany (R.H.)

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http://dx.doi.org/10.1104/pp.114.249276DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4256861PMC
December 2014

Genetic analysis of DEFECTIVE KERNEL1 loop function in three-dimensional body patterning in Physcomitrella patens.

Plant Physiol 2014 Oct 2;166(2):903-19. Epub 2014 Sep 2.

Norwegian University of Life Sciences, N-1432 As, Norway (V.D., O.-A.O.);Department of Biology, Washington University, St. Louis, Missouri 63130 (P.-F.P., R.Q.);Department of Natural Science and Technology, Hedmark University College, N-2318 Hamar, Norway (W.J., P.R., A.E.A., O.-A.O.);Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 20742 (C.F.D., E.D.C.); andMIPS/IBIS, Institute for Bioinformatics and Systems Biology, Helmholtz Center Munich, 85764 Neuherberg, Germany (K.G.K., K.F.X.M.)

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http://dx.doi.org/10.1104/pp.114.243758DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4213117PMC
October 2014

Functional diversification within the family of B-GATA transcription factors through the leucine-leucine-methionine domain.

Plant Physiol 2014 Sep 30;166(1):293-305. Epub 2014 Jul 30.

Plant Systems Biology, Technische Universität München, 85354 Freising, Germany (C.B., E.B., Q.L.R., C.S.); andMunich Information Centre for Protein Sequences, Institute for Bioinformatics and Systems Biology, Helmholtz Zentrum München, German Research Center for Environmental Health, 85764 Neuherberg, Germany (K.F.X.M.)

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http://www.plantphysiol.org/lookup/doi/10.1104/pp.114.246660
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http://dx.doi.org/10.1104/pp.114.246660DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4149714PMC
September 2014

Ancient hybridizations among the ancestral genomes of bread wheat.

Science 2014 Jul;345(6194):1250092

Department of Plant Sciences, Norwegian University of Life Sciences, 1432 Ås, Norway.

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http://dx.doi.org/10.1126/science.1250092DOI Listing
July 2014

Genome interplay in the grain transcriptome of hexaploid bread wheat.

Science 2014 Jul;345(6194):1250091

Department of Plant Sciences/Centre for Integrative Genetics, The Norwegian University of Life Sciences (NMBU), 1432 Åas, Norway.

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http://dx.doi.org/10.1126/science.1250091DOI Listing
July 2014

Slicing the wheat genome. Introduction.

Science 2014 Jul;345(6194):285-7

International Wheat Genome Sequencing Consortium, 5207 Wyoming Road, Bethesda, MD 20816, USA.

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http://dx.doi.org/10.1126/science.1257983DOI Listing
July 2014

Extensive and biased intergenomic nonreciprocal DNA exchanges shaped a nascent polyploid genome, Gossypium (cotton).

Genetics 2014 Aug 6;197(4):1153-63. Epub 2014 Jun 6.

Plant Genome Mapping Laboratory, University of Georgia, Athens, Georgia 30602 Department of Plant Biology, University of Georgia, Athens, Georgia 30602 Department of Crop and Soil Science and Department of Genetics, University of Georgia, Athens, Georgia 30602

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http://dx.doi.org/10.1534/genetics.114.166124DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4125390PMC
August 2014

RNASeqExpressionBrowser--a web interface to browse and visualize high-throughput expression data.

Bioinformatics 2014 Sep 14;30(17):2519-20. Epub 2014 May 14.

Institute for Bioinformatics and Systems Biology (IBIS), Helmholtz Center Munich, National Research Center for Environment and Health, 85764 Neuherberg, Germany.

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http://dx.doi.org/10.1093/bioinformatics/btu334DOI Listing
September 2014

Whole-genome profiling and shotgun sequencing delivers an anchored, gene-decorated, physical map assembly of bread wheat chromosome 6A.

Plant J 2014 Jul 19;79(2):334-47. Epub 2014 Jun 19.

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstr. 3, D-06466, Stadt Seeland (OT) Gatersleben, Germany.

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http://dx.doi.org/10.1111/tpj.12550DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4241024PMC
July 2014

Plant genome sequencing - applications for crop improvement.

Curr Opin Biotechnol 2014 Apr 21;26:31-7. Epub 2013 Sep 21.

MIPS, Institute for Bioinformatics and Systems Biology, Helmholtz Center Munich, Neuherberg, Germany.

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http://dx.doi.org/10.1016/j.copbio.2013.08.019DOI Listing
April 2014

Reticulate evolution of the rye genome.

Plant Cell 2013 Oct 8;25(10):3685-98. Epub 2013 Oct 8.

Helmholtz Center Munich, German Research Centre for Environmental Health, Munich Information Center for Protein Sequences/IBIS, Institute of Bioinformatics and Systems Biology, 85764 Neuherberg, Germany.

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http://dx.doi.org/10.1105/tpc.113.114553DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3877785PMC
October 2013

The perennial ryegrass GenomeZipper: targeted use of genome resources for comparative grass genomics.

Plant Physiol 2013 Feb 26;161(2):571-82. Epub 2012 Nov 26.

Institute of Bioinformatics and Systems Biology, Helmholtz Center Munich, German Research Center for Environmental Health, 85764 Neuherberg, Germany.

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http://dx.doi.org/10.1104/pp.112.207282DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561004PMC
February 2013

Evidence for a Contribution of ALA Synthesis to Plastid-To-Nucleus Signaling.

Front Plant Sci 2012 29;3:236. Epub 2012 Oct 29.

Department of Plant Physiology, Institute of Biology, Humboldt-Universität zu Berlin Berlin, Germany ; Plant Systems Biology, Biosciences Division, Oak Ridge National Laboratory Oak Ridge, TN, USA.

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http://dx.doi.org/10.3389/fpls.2012.00236DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3483025PMC
November 2012

The Medicago genome provides insight into the evolution of rhizobial symbioses.

Authors:
Nevin D Young Frédéric Debellé Giles E D Oldroyd Rene Geurts Steven B Cannon Michael K Udvardi Vagner A Benedito Klaus F X Mayer Jérôme Gouzy Heiko Schoof Yves Van de Peer Sebastian Proost Douglas R Cook Blake C Meyers Manuel Spannagl Foo Cheung Stéphane De Mita Vivek Krishnakumar Heidrun Gundlach Shiguo Zhou Joann Mudge Arvind K Bharti Jeremy D Murray Marina A Naoumkina Benjamin Rosen Kevin A T Silverstein Haibao Tang Stephane Rombauts Patrick X Zhao Peng Zhou Valérie Barbe Philippe Bardou Michael Bechner Arnaud Bellec Anne Berger Hélène Bergès Shelby Bidwell Ton Bisseling Nathalie Choisne Arnaud Couloux Roxanne Denny Shweta Deshpande Xinbin Dai Jeff J Doyle Anne-Marie Dudez Andrew D Farmer Stéphanie Fouteau Carolien Franken Chrystel Gibelin John Gish Steven Goldstein Alvaro J González Pamela J Green Asis Hallab Marijke Hartog Axin Hua Sean J Humphray Dong-Hoon Jeong Yi Jing Anika Jöcker Steve M Kenton Dong-Jin Kim Kathrin Klee Hongshing Lai Chunting Lang Shaoping Lin Simone L Macmil Ghislaine Magdelenat Lucy Matthews Jamison McCorrison Erin L Monaghan Jeong-Hwan Mun Fares Z Najar Christine Nicholson Céline Noirot Majesta O'Bleness Charles R Paule Julie Poulain Florent Prion Baifang Qin Chunmei Qu Ernest F Retzel Claire Riddle Erika Sallet Sylvie Samain Nicolas Samson Iryna Sanders Olivier Saurat Claude Scarpelli Thomas Schiex Béatrice Segurens Andrew J Severin D Janine Sherrier Ruihua Shi Sarah Sims Susan R Singer Senjuti Sinharoy Lieven Sterck Agnès Viollet Bing-Bing Wang Keqin Wang Mingyi Wang Xiaohong Wang Jens Warfsmann Jean Weissenbach Doug D White Jim D White Graham B Wiley Patrick Wincker Yanbo Xing Limei Yang Ziyun Yao Fu Ying Jixian Zhai Liping Zhou Antoine Zuber Jean Dénarié Richard A Dixon Gregory D May David C Schwartz Jane Rogers Francis Quétier Christopher D Town Bruce A Roe

Nature 2011 Nov 16;480(7378):520-4. Epub 2011 Nov 16.

Department of Plant Pathology, University of Minnesota, St Paul, Minnesota 55108, USA.

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http://dx.doi.org/10.1038/nature10625DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3272368PMC
November 2011

Comparative sequence analysis of VRN1 alleles of Lolium perenne with the co-linear regions in barley, wheat, and rice.

Mol Genet Genomics 2011 Dec 12;286(5-6):433-47. Epub 2011 Nov 12.

Department of Molecular Biology and Genetics, Research Centre Flakkebjerg, Aarhus University, Forsøgsvej 1, 4200, Slagelse, Denmark.

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http://link.springer.com/content/pdf/10.1007/s00438-011-0654
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http://link.springer.com/10.1007/s00438-011-0654-8
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http://dx.doi.org/10.1007/s00438-011-0654-8DOI Listing
December 2011

Intracompartmental and intercompartmental transcriptional networks coordinate the expression of genes for organellar functions.

Plant Physiol 2011 Sep 20;157(1):386-404. Epub 2011 Jul 20.

Lehrstuhl für Molekularbiologie der Pflanzen, Department Biologie I, Ludwig-Maximilians-Universität München, D-82152 Planegg-Martinsried, Germany.

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http://www.plantphysiol.org/lookup/doi/10.1104/pp.111.177691
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http://dx.doi.org/10.1104/pp.111.177691DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3165886PMC
September 2011

MIPS: curated databases and comprehensive secondary data resources in 2010.

Nucleic Acids Res 2011 Jan 24;39(Database issue):D220-4. Epub 2010 Nov 24.

Institute for Bioinformatics and Systems Biology, MIPS, Helmholtz Center F Health and Environment, Ingolstädter Landstr 1, D-85764 Neuherberg, Germany.

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http://dx.doi.org/10.1093/nar/gkq1157DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013725PMC
January 2011

Impact of natural genetic variation on the transcriptome of autotetraploid Arabidopsis thaliana.

Proc Natl Acad Sci U S A 2010 Oct 27;107(41):17809-14. Epub 2010 Sep 27.

Lehrstuhl für Genetik, Technische Universität München, Wissenschaftszentrum Weihenstephan, D-85350 Freising, Germany.

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http://dx.doi.org/10.1073/pnas.1000852107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2955106PMC
October 2010

Gene content and virtual gene order of barley chromosome 1H.

Plant Physiol 2009 Oct 19;151(2):496-505. Epub 2009 Aug 19.

Munich Information Center for Protein Sequences/Institute for Bioinformatics and Systems Biology, Helmholtz Zentrum Munich, German Research Center for Environmental Health, 85764 Neuherberg, Germany.

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http://dx.doi.org/10.1104/pp.109.142612DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2754631PMC
October 2009

Discovery of cis-elements between sorghum and rice using co-expression and evolutionary conservation.

BMC Genomics 2009 Jun 26;10:284. Epub 2009 Jun 26.

MIPS/IBIS Institute of Bioinformatics and System Biology, Helmholtz Center Munich, Neuherberg, Germany.

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http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2164-10-284DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2714861PMC
June 2009

MIPS plant genome information resources.

Methods Mol Biol 2007 ;406:137-59

MIPS Institute for Bioinformatics, GSF Research Center for Environment and Health, Neuherberg, Germany.

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http://dx.doi.org/10.1007/978-1-59745-535-0_6DOI Listing
January 2009

Apollo2Go: a web service adapter for the Apollo genome viewer to enable distributed genome annotation.

BMC Bioinformatics 2007 Aug 30;8:320. Epub 2007 Aug 30.

MIPS/Institute for Bioinformatics, GSF Research Center for Environment and Health, Ingolstädter Landstrasse 1; 85764 Neuherberg, Germany.

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http://dx.doi.org/10.1186/1471-2105-8-320DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2001201PMC
August 2007