Publications by authors named "Khedoudja Nafa"

71Publications

RUNX2 (6p21.1) amplification in osteosarcoma.

Hum Pathol 2019 12 25;94:23-28. Epub 2019 Oct 25.

Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY, USA, 10065. Electronic address:

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December 2019

Erratum: Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients.

Authors:
Ahmet Zehir Ryma Benayed Ronak H Shah Aijazuddin Syed Sumit Middha Hyunjae R Kim Preethi Srinivasan Jianjiong Gao Debyani Chakravarty Sean M Devlin Matthew D Hellmann David A Barron Alison M Schram Meera Hameed Snjezana Dogan Dara S Ross Jaclyn F Hechtman Deborah F DeLair JinJuan Yao Diana L Mandelker Donavan T Cheng Raghu Chandramohan Abhinita S Mohanty Ryan N Ptashkin Gowtham Jayakumaran Meera Prasad Mustafa H Syed Anoop Balakrishnan Rema Zhen Y Liu Khedoudja Nafa Laetitia Borsu Justyna Sadowska Jacklyn Casanova Ruben Bacares Iwona J Kiecka Anna Razumova Julie B Son Lisa Stewart Tessara Baldi Kerry A Mullaney Hikmat Al-Ahmadie Efsevia Vakiani Adam A Abeshouse Alexander V Penson Philip Jonsson Niedzica Camacho Matthew T Chang Helen H Won Benjamin E Gross Ritika Kundra Zachary J Heins Hsiao-Wei Chen Sarah Phillips Hongxin Zhang Jiaojiao Wang Angelica Ochoa Jonathan Wills Michael Eubank Stacy B Thomas Stuart M Gardos Dalicia N Reales Jesse Galle Robert Durany Roy Cambria Wassim Abida Andrea Cercek Darren R Feldman Mrinal M Gounder A Ari Hakimi James J Harding Gopa Iyer Yelena Y Janjigian Emmet J Jordan Ciara M Kelly Maeve A Lowery Luc G T Morris Antonio M Omuro Nitya Raj Pedram Razavi Alexander N Shoushtari Neerav Shukla Tara E Soumerai Anna M Varghese Rona Yaeger Jonathan Coleman Bernard Bochner Gregory J Riely Leonard B Saltz Howard I Scher Paul J Sabbatini Mark E Robson David S Klimstra Barry S Taylor Jose Baselga Nikolaus Schultz David M Hyman Maria E Arcila David B Solit Marc Ladanyi Michael F Berger

Nat Med 2017 08;23(8):1004

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August 2017

Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients.

Authors:
Ahmet Zehir Ryma Benayed Ronak H Shah Aijazuddin Syed Sumit Middha Hyunjae R Kim Preethi Srinivasan Jianjiong Gao Debyani Chakravarty Sean M Devlin Matthew D Hellmann David A Barron Alison M Schram Meera Hameed Snjezana Dogan Dara S Ross Jaclyn F Hechtman Deborah F DeLair JinJuan Yao Diana L Mandelker Donavan T Cheng Raghu Chandramohan Abhinita S Mohanty Ryan N Ptashkin Gowtham Jayakumaran Meera Prasad Mustafa H Syed Anoop Balakrishnan Rema Zhen Y Liu Khedoudja Nafa Laetitia Borsu Justyna Sadowska Jacklyn Casanova Ruben Bacares Iwona J Kiecka Anna Razumova Julie B Son Lisa Stewart Tessara Baldi Kerry A Mullaney Hikmat Al-Ahmadie Efsevia Vakiani Adam A Abeshouse Alexander V Penson Philip Jonsson Niedzica Camacho Matthew T Chang Helen H Won Benjamin E Gross Ritika Kundra Zachary J Heins Hsiao-Wei Chen Sarah Phillips Hongxin Zhang Jiaojiao Wang Angelica Ochoa Jonathan Wills Michael Eubank Stacy B Thomas Stuart M Gardos Dalicia N Reales Jesse Galle Robert Durany Roy Cambria Wassim Abida Andrea Cercek Darren R Feldman Mrinal M Gounder A Ari Hakimi James J Harding Gopa Iyer Yelena Y Janjigian Emmet J Jordan Ciara M Kelly Maeve A Lowery Luc G T Morris Antonio M Omuro Nitya Raj Pedram Razavi Alexander N Shoushtari Neerav Shukla Tara E Soumerai Anna M Varghese Rona Yaeger Jonathan Coleman Bernard Bochner Gregory J Riely Leonard B Saltz Howard I Scher Paul J Sabbatini Mark E Robson David S Klimstra Barry S Taylor Jose Baselga Nikolaus Schultz David M Hyman Maria E Arcila David B Solit Marc Ladanyi Michael F Berger

Nat Med 2017 Jun 8;23(6):703-713. Epub 2017 May 8.

Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA.

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June 2017

A case of acute myeloid leukemia with e6a2 BCR-ABL fusion transcript acquired after progressing from chronic myelomonocytic leukemia.

Leuk Res Rep 2017 31;7:17-19. Epub 2017 Jan 31.

Department of Laboratory Medicine and Pathology Mayo Clinic, 200 First St. SW, Rochester, MN 55905, USA.

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January 2017

Locked Nucleic Acid Probes (LNA) for Enhanced Detection of Low-Level, Clinically Significant Mutations.

Methods Mol Biol 2016 ;1392:71-82

Department of Pathology, Memorial Sloan Kettering Cancer Center, 1275 York Avenue, New York, NY, 10065, USA.

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November 2016

Use of touch imprint cytology as a simple method to enrich tumor cells for molecular analysis.

Cancer Cytopathol 2013 Jul 10;121(7):354-60. Epub 2013 Apr 10.

Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, New York 10065, USA.

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July 2013

Prevalence, clinicopathologic associations, and molecular spectrum of ERBB2 (HER2) tyrosine kinase mutations in lung adenocarcinomas.

Clin Cancer Res 2012 Sep 3;18(18):4910-8. Epub 2012 Jul 3.

Department of Pathology, and Thoracic Oncology Service, Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.

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September 2012

Melanocytic tumor with GNA11 p.Q209L mutation mimicking a foramen magnum meningioma.

Clin Neurol Neurosurg 2012 Oct 13;114(8):1197-200. Epub 2012 Mar 13.

Department of Neurosurgery, NYU Langone Medical Center, New York, NY, United States.

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October 2012

CpG methylation analysis--current status of clinical assays and potential applications in molecular diagnostics: a report of the Association for Molecular Pathology.

J Mol Diagn 2009 Jul 18;11(4):266-78. Epub 2009 Jun 18.

Methylation Working Group of the Association for Molecular Pathology Clinical Practice Committee, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania, USA.

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July 2009

cDNA analysis demonstrates that the BRCA2 intronic variant IVS4-12del5 is a deleterious mutation.

Mutat Res 2009 Apr 25;663(1-2):84-9. Epub 2008 Nov 25.

Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.

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April 2009

KRAS mutational testing in the selection of patients for EGFR-targeted therapies.

Semin Diagn Pathol 2008 Nov;25(4):288-94

Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, New York 10065, USA.

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November 2008

Frequency and distinctive spectrum of KRAS mutations in never smokers with lung adenocarcinoma.

Clin Cancer Res 2008 Sep;14(18):5731-4

Thoracic Oncology Service, Division of Solid Tumor Oncology, Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, New York 10065, USA.

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September 2008

EWSR1-CREB1 is the predominant gene fusion in angiomatoid fibrous histiocytoma.

Genes Chromosomes Cancer 2007 Dec;46(12):1051-60

Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.

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December 2007

EWS-CREB1: a recurrent variant fusion in clear cell sarcoma--association with gastrointestinal location and absence of melanocytic differentiation.

Clin Cancer Res 2006 Sep;12(18):5356-62

Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, New York 10021, and Department of Pathology, Brigham and Women's Hospital, Boston, Massachusetts, USA.

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September 2006

TGFBR1*6A may contribute to hereditary colorectal cancer.

J Clin Oncol 2005 May;23(13):3074-8

Cancer Genetics Program, Division of Hematology/Oncology, Department of Medicine, Robert H. Lurie Comprehensive Cancer Center, Northwestern University Feinberg School of Medicine, 676 N St Clair St, Suite 880, Chicago, IL 60611, USA.

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May 2005

Localization of cancer susceptibility genes by genome-wide single-nucleotide polymorphism linkage-disequilibrium mapping.

Cancer Res 2004 Nov;64(21):8116-25

Department of Epidemiology and Biostatistics, and Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, New York 10021, USA.

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November 2004

A636P testing in Ashkenazi Jews.

Fam Cancer 2004 ;3(3-4):223-7

Department of Surgery, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.

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February 2005

Pleomorphic characteristics of a germ-line KIT mutation in a large kindred with gastrointestinal stromal tumors, hyperpigmentation, and dysphagia.

Clin Cancer Res 2004 Feb;10(4):1250-4

Clinical Genetics and Gastrointestinal Oncology Services, Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, New York 10021, USA.

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February 2004

Loss of the tumor suppressor PML in human cancers of multiple histologic origins.

J Natl Cancer Inst 2004 Feb;96(4):269-79

Molecular Biology Program and Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.

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February 2004

Frequency of BRCA1 and BRCA2 mutations in unselected Ashkenazi Jewish patients with colorectal cancer.

J Natl Cancer Inst 2004 Jan;96(1):68-70

Clinical Genetics Service, Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.

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January 2004

Mutations of the PML tumor suppressor gene in acute promyelocytic leukemia.

Blood 2004 Mar 20;103(6):2358-62. Epub 2003 Nov 20.

Molecular Biology Program and Department of Pathology, Memorial Sloan-Kettering Cancer Center, Sloan-Kettering Division, Graduate School of Medical Sciences, Cornell University, New York, NY 10021, USA.

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March 2004

MSH6 germline mutations are rare in colorectal cancer families.

Int J Cancer 2003 Nov;107(4):571-9

Cell Biology Program, Sloan-Kettering Institute, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.

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November 2003