Publications by authors named "Kevin Baßler"

38Publications

Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment.

Cell 2020 09 5;182(6):1419-1440.e23. Epub 2020 Aug 5.

Department of Infectious Diseases and Respiratory Medicine, Charité, Universitätsmedizin Berlin, Berlin, Germany; German Center for Lung Research (DZL).

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http://dx.doi.org/10.1016/j.cell.2020.08.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7405822PMC
September 2020

Scalable Prediction of Acute Myeloid Leukemia Using High-Dimensional Machine Learning and Blood Transcriptomics.

iScience 2020 Jan 18;23(1):100780. Epub 2019 Dec 18.

LIMES-Institute, Department for Genomics and Immunoregulation, University of Bonn, Carl-Troll-Str. 31, 53115 Bonn, Germany; PRECISE Platform for Single Cell Genomics and Epigenomics, German Center for Neurodegenerative Diseases and the University of Bonn, Venusberg-Campus 1, Building 99, 53127 Bonn, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.isci.2019.100780DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6992905PMC
January 2020

Reduced network extremal ensemble learning (RenEEL) scheme for community detection in complex networks.

Sci Rep 2019 10 2;9(1):14234. Epub 2019 Oct 2.

Department of Physics, University of Houston, Houston, Texas, 77204, USA.

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http://dx.doi.org/10.1038/s41598-019-50739-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6775136PMC
October 2019

A Bioinformatic Toolkit for Single-Cell mRNA Analysis.

Methods Mol Biol 2019 ;1979:433-455

Department for Genomics and Immunoregulation, Life and Medical Sciences Institute (LIMES), University of Bonn, Bonn, Germany.

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http://dx.doi.org/10.1007/978-1-4939-9240-9_26DOI Listing
August 2019

Enzymatic Activity of HPGD in Treg Cells Suppresses Tconv Cells to Maintain Adipose Tissue Homeostasis and Prevent Metabolic Dysfunction.

Immunity 2019 05 23;50(5):1232-1248.e14. Epub 2019 Apr 23.

Molecular Immunology in Neurodegeneration, German Center for Neurodegenerative Diseases (DZNE), Sigmund-Freud-Str. 27, 53127 Bonn, Germany; LIMES-Institute, Laboratory for Genomics and Immunoregulation, University of Bonn, Carl-Troll-Str. 31, 53115 Bonn, Germany; PRECISE, Platform for Single Cell Genomics and Epigenomics at the German Center for Neurodegenerative Diseases and the University of Bonn, Sigmund-Freud-Str. 27, 53127 Bonn, Germany. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S10747613193013
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http://dx.doi.org/10.1016/j.immuni.2019.03.014DOI Listing
May 2019

Coevolution of nodes and links: Diversity-driven coexistence in cyclic competition of three species.

Phys Rev E 2019 Feb;99(2-1):022309

Max-Planck-Institut für Physik komplexer Systeme, Nöthnitzer Strasse 38, Dresden D-01187, Germany and Center for Soft Matter and Biological Physics, Department of Physics, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061, USA.

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http://dx.doi.org/10.1103/PhysRevE.99.022309DOI Listing
February 2019

The Myeloid Cell Compartment-Cell by Cell.

Annu Rev Immunol 2019 04 16;37:269-293. Epub 2019 Jan 16.

Department for Genomics and Immunoregulation, Life and Medical Sciences (LIMES) Institute, University of Bonn, 53115 Bonn, Germany; email: , , , ,

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https://www.annualreviews.org/doi/10.1146/annurev-immunol-04
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http://dx.doi.org/10.1146/annurev-immunol-042718-041728DOI Listing
April 2019

Nuclear FOXO1 promotes lymphomagenesis in germinal center B cells.

Blood 2018 12 17;132(25):2670-2683. Epub 2018 Oct 17.

Immune Regulation and Cancer, Max Delbrück Center for Molecular Medicine in the Helmholtz Alliance, Berlin-Buch, Germany.

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http://www.bloodjournal.org/lookup/doi/10.1182/blood-2018-06
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http://dx.doi.org/10.1182/blood-2018-06-856203DOI Listing
December 2018

Dysregulated Functions of Lung Macrophage Populations in COPD.

J Immunol Res 2018 18;2018:2349045. Epub 2018 Feb 18.

Genomics & Immunoregulation, Life and Medical Sciences Institute (LIMES), Carl-Troll-Str. 31, 53115 Bonn, Germany.

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http://dx.doi.org/10.1155/2018/2349045DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5835245PMC
September 2018

Western Diet Triggers NLRP3-Dependent Innate Immune Reprogramming.

Cell 2018 01;172(1-2):162-175.e14

Institute of Innate Immunity, University Hospital Bonn, University of Bonn, 53127 Bonn, Germany; Department of Infectious Diseases & Immunology, UMass Medical School, Worcester, MA 01605, USA; Centre of Molecular Inflammation Research, Norwegian University of Science and Technology, 7491 Trondheim, Norway; German Center for Neurodegenerative Diseases (DZNE), 53127 Bonn, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2017.12.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6324559PMC
January 2018

Anomalous scaling of stochastic processes and the Moses effect.

Phys Rev E 2017 Apr 28;95(4-1):042141. Epub 2017 Apr 28.

Department of Physics, University of Houston, Houston, Texas 77204, USA.

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http://dx.doi.org/10.1103/PhysRevE.95.042141DOI Listing
April 2017

Reconstruction and topological characterization of the sigma factor regulatory network of Mycobacterium tuberculosis.

Nat Commun 2016 Mar 31;7:11062. Epub 2016 Mar 31.

Public Health Research Institute, New Jersey Medical School, Rutgers University, Newark, New Jersey 07103, USA.

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http://dx.doi.org/10.1038/ncomms11062DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4821874PMC
March 2016

Symmetry in critical random Boolean network dynamics.

Phys Rev E Stat Nonlin Soft Matter Phys 2014 Apr 16;89(4):042808. Epub 2014 Apr 16.

Department of Physics, University of Houston, Houston, Texas 77204-5005, USA and Texas Center for Superconductivity, University of Houston, Houston, Texas 77204-5002, USA and Max Planck Institute for the Physics of Complex Systems, Nöthnitzer Straße 38, Dresden D-01187, Germany.

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http://dx.doi.org/10.1103/PhysRevE.89.042808DOI Listing
April 2014

Robust detection of hierarchical communities from Escherichia coli gene expression data.

PLoS Comput Biol 2012 23;8(2):e1002391. Epub 2012 Feb 23.

Department of Physics, University of Houston, Houston, Texas, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.1002391DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3285575PMC
June 2012

Canalization in the critical states of highly connected networks of competing Boolean nodes.

Phys Rev E Stat Nonlin Soft Matter Phys 2011 Nov 7;84(5 Pt 2):056103. Epub 2011 Nov 7.

Department of Physics, University of Houston, Houston, Texas 77204-5005, USA.

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http://dx.doi.org/10.1103/PhysRevE.84.056103DOI Listing
November 2011

All scale-free networks are sparse.

Phys Rev Lett 2011 Oct 17;107(17):178701. Epub 2011 Oct 17.

Max-Planck-Institut für Physik komplexer Systeme, Nöthnitzer Strasse 38, 01187 Dresden, Germany.

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http://dx.doi.org/10.1103/PhysRevLett.107.178701DOI Listing
October 2011

Phase diagram for a two-dimensional, two-temperature, diffusive XY model.

Phys Rev E Stat Nonlin Soft Matter Phys 2010 Oct 13;82(4 Pt 1):040102. Epub 2010 Oct 13.

Department of Physics, 617 Science and Research 1, University of Houston, Houston, Texas 77204-5005, USA.

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http://dx.doi.org/10.1103/PhysRevE.82.040102DOI Listing
October 2010

Anomalous ordering in inhomogeneously strained materials.

Phys Rev E Stat Nonlin Soft Matter Phys 2010 Sep 10;82(3 Pt 1):031115. Epub 2010 Sep 10.

Department of Physics, 617 Science and Research 1, University of Houston, Houston, Texas 77204-5005, USA.

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http://dx.doi.org/10.1103/PhysRevE.82.031115DOI Listing
September 2010

Efficient and exact sampling of simple graphs with given arbitrary degree sequence.

PLoS One 2010 Apr 8;5(4):e10012. Epub 2010 Apr 8.

Department of Physics, University of Houston, Houston, Texas, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0010012PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2851615PMC
April 2010

Collectively optimal routing for congested traffic limited by link capacity.

Phys Rev E Stat Nonlin Soft Matter Phys 2009 Dec 17;80(6 Pt 2):066116. Epub 2009 Dec 17.

Department of Physics, University of Houston, Houston Texas 77204-5005, USA.

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http://dx.doi.org/10.1103/PhysRevE.80.066116DOI Listing
December 2009

Nonstationary increments, scaling distributions, and variable diffusion processes in financial markets.

Proc Natl Acad Sci U S A 2007 Oct 23;104(44):17287-90. Epub 2007 Oct 23.

Department of Physics and Texas Center for Superconductivity, University of Houston, Houston, TX 77204, USA.

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http://www.pnas.org/cgi/doi/10.1073/pnas.0708664104
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http://dx.doi.org/10.1073/pnas.0708664104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2077248PMC
October 2007

Transport optimization on complex networks.

Chaos 2007 Jun;17(2):026102

Department of Physics, The University of Houston, Houston, Texas 77204-5005, USA.

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http://dx.doi.org/10.1063/1.2731718DOI Listing
June 2007

Congestion-gradient driven transport on complex networks.

Phys Rev E Stat Nonlin Soft Matter Phys 2006 Oct 19;74(4 Pt 2):046114. Epub 2006 Oct 19.

Department of Physics, The University of Houston, Houston, Texas 77004, USA.

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http://dx.doi.org/10.1103/PhysRevE.74.046114DOI Listing
October 2006

Optimal transport on complex networks.

Phys Rev E Stat Nonlin Soft Matter Phys 2006 Oct 6;74(4 Pt 2):046106. Epub 2006 Oct 6.

Department of Physics, The University of Houston, Houston, Texas 77004, USA.

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http://dx.doi.org/10.1103/PhysRevE.74.046106DOI Listing
October 2006

Emergent criticality from coevolution in random Boolean networks.

Phys Rev E Stat Nonlin Soft Matter Phys 2006 Oct 17;74(4 Pt 1):041910. Epub 2006 Oct 17.

Department of Physics, University of Houston, Houston, Texas 77204-5005, USA.

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http://dx.doi.org/10.1103/PhysRevE.74.041910DOI Listing
October 2006

Nonlinear evolution of surface morphology in InAs/AlAs superlattices via surface diffusion.

Phys Rev Lett 2006 Apr 6;96(13):136102. Epub 2006 Apr 6.

Institute of Condensed Matter Physics, Masaryk University, Kotlárská 2, 61137 Brno, Czech Republic.

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http://dx.doi.org/10.1103/PhysRevLett.96.136102DOI Listing
April 2006

Evolution of developmental canalization in networks of competing boolean nodes.

Phys Rev Lett 2004 Jul 15;93(3):038101. Epub 2004 Jul 15.

Department of Physics, University of Houston, Houston, Texas 77204-5005, USA.

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http://dx.doi.org/10.1103/PhysRevLett.93.038101DOI Listing
July 2004

Network dynamics: jamming is limited in scale-free systems.

Nature 2004 Apr;428(6984):716

Center for Nonlinear Studies and Complex Systems Group, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA.

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http://dx.doi.org/10.1038/428716aDOI Listing
April 2004

Competition-driven network dynamics: emergence of a scale-free leadership structure and collective efficiency.

Phys Rev Lett 2004 Feb 6;92(5):058701. Epub 2004 Feb 6.

Center for Nonlinear Studies and Complex Systems Group, Theoretical Division, Los Alamos National Laboratory, MS B213 Los Alamos, New Mexico 87545, USA.

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http://dx.doi.org/10.1103/PhysRevLett.92.058701DOI Listing
February 2004

Model for bone strength and osteoporotic fractures.

Phys Rev Lett 2002 Feb 24;88(6):068101. Epub 2002 Jan 24.

Department of Physics, University of Houston, Houston, Texas 77204, USA.

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http://dx.doi.org/10.1103/PhysRevLett.88.068101DOI Listing
February 2002