Publications by authors named "Keunsoo Kang"

94Publications

Genome-wide blood DNA methylation analysis in patients with delayed cerebral ischemia after subarachnoid hemorrhage.

Sci Rep 2020 07 10;10(1):11419. Epub 2020 Jul 10.

Institute of New Frontier Stroke Research, Hallym University College of Medicine, Chuncheon, Korea.

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http://dx.doi.org/10.1038/s41598-020-68325-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7351711PMC
July 2020

ETS1 Suppresses Tumorigenesis of Human Breast Cancer via Trans-Activation of Canonical Tumor Suppressor Genes.

Front Oncol 2020 14;10:642. Epub 2020 May 14.

Department of Microbiology and Immunology, Yonsei University College of Medicine, Seoul, South Korea.

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http://dx.doi.org/10.3389/fonc.2020.00642DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7239993PMC
May 2020

Hormone Receptor-Status Prediction in Breast Cancer Using Gene Expression Profiles and Their Macroscopic Landscape.

Cancers (Basel) 2020 May 5;12(5). Epub 2020 May 5.

Department of Internal Medicine, College of Medicine, The Catholic University of Korea, Seoul 06591, Korea.

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http://dx.doi.org/10.3390/cancers12051165DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7281553PMC
May 2020

Predicting commercially available antiviral drugs that may act on the novel coronavirus (SARS-CoV-2) through a drug-target interaction deep learning model.

Comput Struct Biotechnol J 2020 30;18:784-790. Epub 2020 Mar 30.

Department of Microbiology, College of Science & Technology, Dankook University, Cheonan, Republic of Korea.

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http://dx.doi.org/10.1016/j.csbj.2020.03.025DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7118541PMC
March 2020

Differentially Expressed Genes in Matched Normal, Cancer, and Lymph Node Metastases Predict Clinical Outcomes in Patients With Breast Cancer.

Appl Immunohistochem Mol Morphol 2020 02;28(2):111-122

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, Republic of Korea.

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http://dx.doi.org/10.1097/PAI.0000000000000717DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7028469PMC
February 2020

Erratum to: Flavobacterium parvum sp. nov., isolated from soil polluted by sewer water.

J Microbiol 2019 Dec;57(12):1132

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, 31116, Republic of Korea.

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http://dx.doi.org/10.1007/s12275-019-0720-1DOI Listing
December 2019

Expression of Is Associated with Prognosis of Patients with Colon Adenocarcinoma.

J Clin Med 2019 Nov 7;8(11). Epub 2019 Nov 7.

Division of Oncology, Department of Internal Medicine, Eunpyeong St. Mary's Hospital, The Catholic University of Korea, Seoul 03312, Korea.

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http://dx.doi.org/10.3390/jcm8111903DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6912729PMC
November 2019

Transposable element-mediated structural variation analysis in dog breeds using whole-genome sequencing.

Mamm Genome 2019 10 15;30(9-10):289-300. Epub 2019 Aug 15.

Department of Nanobiomedical Science & BK21 PLUS NBM Global Research Center for Regenerative Medicine, Dankook University, Cheonan, 31116, Republic of Korea.

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http://link.springer.com/10.1007/s00335-019-09812-5
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http://dx.doi.org/10.1007/s00335-019-09812-5DOI Listing
October 2019

Aberrantly hypermethylated tumor suppressor genes were identified in oral squamous cell carcinoma (OSCC).

Clin Epigenetics 2019 08 12;11(1):116. Epub 2019 Aug 12.

Department of Oral Pathology, School of Dentistry, Pusan National University, Yangsan, 50612, Gyeongsangnam-do, Republic of Korea.

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http://dx.doi.org/10.1186/s13148-019-0715-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6689875PMC
August 2019

Cascaded Wx: A Novel Prognosis-Related Feature Selection Framework in Human Lung Adenocarcinoma Transcriptomes.

Front Genet 2019 19;10:662. Epub 2019 Jul 19.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, South Korea.

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http://dx.doi.org/10.3389/fgene.2019.00662DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6658675PMC
July 2019

IFN-γ selectively suppresses a subset of TLR4-activated genes and enhancers to potentiate macrophage activation.

Nat Commun 2019 07 25;10(1):3320. Epub 2019 Jul 25.

Arthritis and Tissue Degeneration Program and the David Z. Rosensweig Genomics Research Center, Hospital for Special Surgery, New York, NY, 10021, USA.

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http://dx.doi.org/10.1038/s41467-019-11147-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6658531PMC
July 2019

Wx: a neural network-based feature selection algorithm for transcriptomic data.

Sci Rep 2019 07 19;9(1):10500. Epub 2019 Jul 19.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, 31116, Republic of Korea.

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http://dx.doi.org/10.1038/s41598-019-47016-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6642261PMC
July 2019

P-TEFb Regulates Transcriptional Activation in Non-coding RNA Genes.

Front Genet 2019 24;10:342. Epub 2019 Apr 24.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, South Korea.

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http://dx.doi.org/10.3389/fgene.2019.00342DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6491683PMC
April 2019

QKI, a miR-200 target gene, suppresses epithelial-to-mesenchymal transition and tumor growth.

Int J Cancer 2019 09 14;145(6):1585-1595. Epub 2019 May 14.

Cancer Research Institute, College of Medicine, The Catholic University of Korea, Seoul, South Korea.

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http://dx.doi.org/10.1002/ijc.32372DOI Listing
September 2019

MiR-34a and miR-34b/c have distinct effects on the suppression of lung adenocarcinomas.

Exp Mol Med 2019 01 17;51(1):1-10. Epub 2019 Jan 17.

Department of Molecular Medicine, College of Medicine, Ewha Womans University, Seoul, 07985, Korea.

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http://dx.doi.org/10.1038/s12276-018-0203-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6353903PMC
January 2019

A Simple Guideline to Assess the Characteristics of RNA-Seq Data.

Biomed Res Int 2018 4;2018:2906292. Epub 2018 Nov 4.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

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https://www.hindawi.com/journals/bmri/2018/2906292/
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http://dx.doi.org/10.1155/2018/2906292DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6241233PMC
March 2019

Upregulation of Ets1 expression by NFATc2 and NFKB1/RELA promotes breast cancer cell invasiveness.

Oncogenesis 2018 Nov 23;7(11):91. Epub 2018 Nov 23.

Division of Integrative Biosciences and Biotechnology (IBB), Department of Life Sciences, Pohang University of Science and Technology, Pohang, 37673, Republic of Korea.

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http://dx.doi.org/10.1038/s41389-018-0101-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6250664PMC
November 2018

Gramella fulva sp. nov., isolated from a dry surface of tidal flat.

J Microbiol 2019 Jan 19;57(1):23-29. Epub 2018 Nov 19.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, 31116, Republic of Korea.

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http://link.springer.com/10.1007/s12275-019-8370-x
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http://dx.doi.org/10.1007/s12275-019-8370-xDOI Listing
January 2019

The transcription factor Foxp1 preserves integrity of an active Foxp3 locus in extrathymic Treg cells.

Nat Commun 2018 10 26;9(1):4473. Epub 2018 Oct 26.

Academy of Immunology and Microbiology, Institute for Basic Science (IBS), Pohang, 37673, Republic of Korea.

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http://www.nature.com/articles/s41467-018-07018-y
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http://dx.doi.org/10.1038/s41467-018-07018-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6203760PMC
October 2018

Genetic variations using whole-exome sequencing might predict response for neoadjuvant chemoradiotherapy in locally advanced rectal cancer.

Med Oncol 2018 Sep 11;35(11):145. Epub 2018 Sep 11.

Department of Oncology/Hematology, School of Medicine, Kyungpook National University, Kyungpook National University Chilgok Hospital, Daegu, Republic of Korea.

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http://link.springer.com/10.1007/s12032-018-1202-8
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http://dx.doi.org/10.1007/s12032-018-1202-8DOI Listing
September 2018

TraRECo: a greedy approach based de novo transcriptome assembler with read error correction using consensus matrix.

BMC Genomics 2018 Sep 4;19(1):653. Epub 2018 Sep 4.

Department of Molecular Biology, College of Natural Sciences, Dankook University, Cheonan-si, Korea.

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https://bmcgenomics.biomedcentral.com/articles/10.1186/s1286
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http://dx.doi.org/10.1186/s12864-018-5034-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6123912PMC
September 2018

A case of interdigitating dendritic cell sarcoma studied by whole-exome sequencing.

Genes Genomics 2018 12 11;40(12):1279-1285. Epub 2018 Aug 11.

Department of Otorhinolaryngology-Head and Neck Surgery, College of Medicine, Dankook University, Cheonan, 31116, Republic of Korea.

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http://dx.doi.org/10.1007/s13258-018-0724-yDOI Listing
December 2018

RNA variant identification discrepancy among splice-aware alignment algorithms.

PLoS One 2018 2;13(8):e0201822. Epub 2018 Aug 2.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, Republic of Korea.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0201822PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6072070PMC
January 2019

Paludirhabdus telluriireducens gen. nov., sp. nov. and Paludirhabdus pumila sp. nov., isolated from soil of a mountain wetland and emended description of Gorillibacterium massiliense.

Int J Syst Evol Microbiol 2018 Sep 1;68(9):3040-3046. Epub 2018 Aug 1.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

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http://dx.doi.org/10.1099/ijsem.0.002946DOI Listing
September 2018

Flavobacterium parvum sp. nov., isolated from soil polluted by sewer water.

J Microbiol 2018 Aug 25;56(8):542-548. Epub 2018 Jul 25.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, 31116, Republic of Korea.

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http://dx.doi.org/10.1007/s12275-018-8145-9DOI Listing
August 2018

Ahniella affigens gen. nov., sp. nov., a gammaproteobacterium isolated from sandy soil near a stream.

Int J Syst Evol Microbiol 2018 Aug 20;68(8):2478-2484. Epub 2018 Jun 20.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

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http://dx.doi.org/10.1099/ijsem.0.002859DOI Listing
August 2018

RNA-seq data of invasive ductal carcinoma and adjacent normal tissues from a Korean patient with breast cancer.

Data Brief 2018 Jun 21;18:736-739. Epub 2018 Mar 21.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

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http://dx.doi.org/10.1016/j.dib.2018.03.079DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996721PMC
June 2018

Integrative Bioinformatics and Functional Analyses of GEO, ENCODE, and TCGA Reveal FADD as a Direct Target of the Tumor Suppressor BRCA1.

Int J Mol Sci 2018 May 14;19(5). Epub 2018 May 14.

Department of Biomedical Sciences, University of Ulsan School of Medicine, Asan Medical Center, Seoul 05505, Korea.

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http://dx.doi.org/10.3390/ijms19051458DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5983697PMC
May 2018

Uliginosibacterium sediminicola sp. nov., isolated from freshwater sediment.

Int J Syst Evol Microbiol 2018 Mar 30;68(3):924-929. Epub 2018 Jan 30.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

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http://dx.doi.org/10.1099/ijsem.0.002611DOI Listing
March 2018

Roseomonas fluminis sp. nov. isolated from sediment of a shallow stream.

Int J Syst Evol Microbiol 2018 Mar 19;68(3):782-787. Epub 2018 Jan 19.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

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http://dx.doi.org/10.1099/ijsem.0.002578DOI Listing
March 2018

TAp73 inhibits cell invasion and migration by directly activating KAI1 expression in colorectal carcinoma.

Cancer Lett 2018 02 6;415:106-116. Epub 2017 Dec 6.

Department of Hemato-Oncology, Chonnam National University Hwasun Hospital, Hwasun, South Korea. Electronic address:

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http://dx.doi.org/10.1016/j.canlet.2017.12.002DOI Listing
February 2018

Combinatorial effects of an epigenetic inhibitor and ionizing radiation contribute to targeted elimination of pancreatic cancer stem cell.

Oncotarget 2017 Oct 6;8(51):89005-89020. Epub 2017 Oct 6.

Research Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), Busan 46033, South Korea.

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http://dx.doi.org/10.18632/oncotarget.21642DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5687664PMC
October 2017

The Ino80 complex mediates epigenetic centromere propagation via active removal of histone H3.

Nat Commun 2017 09 13;8(1):529. Epub 2017 Sep 13.

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, 34141, South Korea.

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http://www.nature.com/articles/s41467-017-00704-3
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http://dx.doi.org/10.1038/s41467-017-00704-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5597579PMC
September 2017

Sphingomonas silvisoli sp. nov., isolated from forest soil.

Int J Syst Evol Microbiol 2017 Aug;67(8):2704-2710

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

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http://dx.doi.org/10.1099/ijsem.0.002001DOI Listing
August 2017

Type I interferons and the cytokine TNF cooperatively reprogram the macrophage epigenome to promote inflammatory activation.

Nat Immunol 2017 Oct 21;18(10):1104-1116. Epub 2017 Aug 21.

Arthritis and Tissue Degeneration Program and the David Z. Rosensweig Genomics Research Center, Hospital for Special Surgery, New York, New York, USA.

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http://dx.doi.org/10.1038/ni.3818DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5605457PMC
October 2017

Interferon-γ Represses M2 Gene Expression in Human Macrophages by Disassembling Enhancers Bound by the Transcription Factor MAF.

Immunity 2017 08;47(2):235-250.e4

Graduate Program in Immunology and Microbial Pathogenesis, Weill Cornell Graduate School of Medical Sciences, New York, NY 10021, USA; Arthritis and Tissue Degeneration Program and the David Z. Rosensweig Genomics Research Center, Hospital for Special Surgery, New York, NY 10021, USA. Electronic address:

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http://dx.doi.org/10.1016/j.immuni.2017.07.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5568089PMC
August 2017

The 19S proteasome is directly involved in the regulation of heterochromatin spreading in fission yeast.

J Biol Chem 2017 10 7;292(41):17144-17155. Epub 2017 Aug 7.

From the Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 34141, South Korea,

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http://dx.doi.org/10.1074/jbc.M117.790824DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5641893PMC
October 2017

Chthonobacter albigriseus gen. nov., sp. nov., isolated from grass-field soil.

Int J Syst Evol Microbiol 2017 Apr;67(4):883-888

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

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http://dx.doi.org/10.1099/ijsem.0.001695DOI Listing
April 2017

Epigenetically altered miR-1247 functions as a tumor suppressor in pancreatic cancer.

Oncotarget 2017 Apr;8(16):26600-26612

Research Center, Dongnam Institute of Radiological and Medical Sciences (DIRAMS), Busan, Republic of Korea.

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http://dx.doi.org/10.18632/oncotarget.15722DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5432282PMC
April 2017

The T47D cell line is an ideal experimental model to elucidate the progesterone-specific effects of a luminal A subtype of breast cancer.

Biochem Biophys Res Commun 2017 05 22;486(3):752-758. Epub 2017 Mar 22.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S0006291X173058
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http://dx.doi.org/10.1016/j.bbrc.2017.03.114DOI Listing
May 2017

Flavobacterium eburneum sp. nov., isolated from reclaimed saline land soil.

Int J Syst Evol Microbiol 2017 Jan 20;67(1):55-59. Epub 2017 Feb 20.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

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http://dx.doi.org/10.1099/ijsem.0.001568DOI Listing
January 2017

A Genome-Wide Methylation Approach Identifies a New Hypermethylated Gene Panel in Ulcerative Colitis.

Int J Mol Sci 2016 Aug 9;17(8). Epub 2016 Aug 9.

Research Center, Dongnam Institute of Radiological & Medical Sciences (DIRAMS), Busan 46033, Korea.

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http://dx.doi.org/10.3390/ijms17081291DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5000688PMC
August 2016

Sediminibacterium aquarii sp. nov., isolated from sediment in a fishbowl.

Int J Syst Evol Microbiol 2016 Nov 4;66(11):4501-4505. Epub 2016 Aug 4.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan 31116, Republic of Korea.

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http://dx.doi.org/10.1099/ijsem.0.001380DOI Listing
November 2016

Primary cancer cell culture: mammary-optimized vs conditional reprogramming.

Endocr Relat Cancer 2016 07 7;23(7):535-54. Epub 2016 Jun 7.

Department of OncologyLombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia, USA Department of MedicineLombardi Comprehensive Cancer Center, Georgetown University, Washington, District of Columbia, USA

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http://dx.doi.org/10.1530/ERC-16-0071DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4962879PMC
July 2016

Dankookia rubra gen. nov., sp. nov., an alphaproteobacterium isolated from sediment of a shallow stream.

J Microbiol 2016 Jun 27;54(6):420-5. Epub 2016 May 27.

Department of Microbiology, College of Natural Sciences, Dankook University, Cheonan, 31116, Republic of Korea.

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http://dx.doi.org/10.1007/s12275-016-6054-3DOI Listing
June 2016

Histone Demethylase KDM6A Controls the Mammary Luminal Lineage through Enzyme-Independent Mechanisms.

Mol Cell Biol 2016 08 29;36(16):2108-20. Epub 2016 Jul 29.

Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland, USA

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http://dx.doi.org/10.1128/MCB.00089-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4968212PMC
August 2016

A basal-like breast cancer-specific role for SRF-IL6 in YAP-induced cancer stemness.

Nat Commun 2015 Dec 16;6:10186. Epub 2015 Dec 16.

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 305-701, Korea.

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http://dx.doi.org/10.1038/ncomms10186DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4703869PMC
December 2015

An autoregulatory enhancer controls mammary-specific STAT5 functions.

Nucleic Acids Res 2016 Feb 7;44(3):1052-63. Epub 2015 Oct 7.

Laboratory of Genetics and Physiology, National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA

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http://nar.oxfordjournals.org/content/early/2015/10/06/nar.g
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http://nar.oxfordjournals.org/lookup/doi/10.1093/nar/gkv999
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http://dx.doi.org/10.1093/nar/gkv999DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4756855PMC
February 2016

Loss of EZH2 results in precocious mammary gland development and activation of STAT5-dependent genes.

Nucleic Acids Res 2015 Oct 6;43(18):8774-89. Epub 2015 Aug 6.

Laboratory of Genetics and Physiology, National Institutes of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA

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http://nar.oxfordjournals.org/content/early/2015/08/06/nar.g
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http://nar.oxfordjournals.org/lookup/doi/10.1093/nar/gkv776
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http://dx.doi.org/10.1093/nar/gkv776DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4605299PMC
October 2015

Genome-wide target site triplication of Alu elements in the human genome.

Gene 2015 May 19;561(2):283-91. Epub 2015 Feb 19.

Department of Nanobiomedical Science & BK21 PLUS NBM Global Research Center for Regenerative Medicine, Dankook University, Cheonan 330-714, Republic of Korea; DKU-Theragen institute for NGS analysis (DTiNa), Cheonan 330-714, Republic of Korea. Electronic address:

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http://dx.doi.org/10.1016/j.gene.2015.02.052DOI Listing
May 2015

The methyltransferases enhancer of zeste homolog (EZH) 1 and EZH2 control hepatocyte homeostasis and regeneration.

FASEB J 2015 May 4;29(5):1653-62. Epub 2014 Dec 4.

*Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney Diseases, and Laboratory of Experimental Carcinogenesis, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA; Department of Internal Medicine, Chonnam National University Medical School, Gwangju, Korea; Department of Microbiology, Dankook University, Cheonan, Korea; and New Drug Development Center, Daegu-Gyeongbuk Medical Innovation Foundation, Daegu, Korea

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http://www.fasebj.org/content/early/2014/12/03/fj.14-261537.
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http://www.fasebj.org/cgi/doi/10.1096/fj.14-261537
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http://dx.doi.org/10.1096/fj.14-261537DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4415007PMC
May 2015

Comparison of tamoxifen and letrozole response in mammary preneoplasia of ER and aromatase overexpressing mice defines an immune-associated gene signature linked to tamoxifen resistance.

Carcinogenesis 2015 Jan 23;36(1):122-32. Epub 2014 Nov 23.

Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC 20057, USA, Department of Medicine, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC 20057, USA

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http://dx.doi.org/10.1093/carcin/bgu237DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4291054PMC
January 2015

The STAT5-regulated miR-193b locus restrains mammary stem and progenitor cell activity and alveolar differentiation.

Dev Biol 2014 Nov 16;395(2):245-54. Epub 2014 Sep 16.

Laboratory of Genetics and Physiology, National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ydbio.2014.09.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4252501PMC
November 2014

BLAT-based comparative analysis for transposable elements: BLATCAT.

Biomed Res Int 2014 18;2014:730814. Epub 2014 May 18.

Department of Nanobiomedical Science and BK21 PLUS NBM Global Research Center for Regenerative Medicine, Dankook University, Cheonan, 330-714, Republic of Korea ; DKU-Theragen Institute for NGS Analysis (DTiNa), Cheonan 330-714, Republic of Korea.

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http://www.hindawi.com/journals/bmri/2014/730814/
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http://dx.doi.org/10.1155/2014/730814DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4052159PMC
February 2015

Trp63 is regulated by STAT5 in mammary tissue and subject to differentiation in cancer.

Endocr Relat Cancer 2014 Jun 6;21(3):443-57. Epub 2014 May 6.

Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, 3970 Reservoir Road NW, Research Building, Room 520A, Washington, District of Columbia 20057, USA Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, 8 Center Drive, Bethesda, Maryland 20892-0822, USA Department of Microbiology, Dankook University, Cheonan 330-714, Republic of Korea Department Pharmazie, Ludwig-Maximilians-Universität München, München, Germany College of Medical Sciences, King Khalid University, Abha, Saudi Arabia Departments of Pathology Medicine, Lombardi Comprehensive Cancer Center, Georgetown University, 3970 Reservoir Road NW, Research Building, Room 520A, Washington, District of Columbia 20057 USA.

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http://dx.doi.org/10.1530/ERC-14-0032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4073690PMC
June 2014

Coregulation of genetic programs by the transcription factors NFIB and STAT5.

Mol Endocrinol 2014 May 28;28(5):758-67. Epub 2014 Mar 28.

Laboratory of Genetics and Physiology (G.W.R., K.K., K.H.Y., Y.T., D.Y., V.C., S.J.J., L.H.), National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892; Department of Microbiology (K.K.), Dankook University, Cheonan 330-714, Republic of Korea; Chengdu University of Traditional Chinese Medicine (Y.T.), Chengdu 610072, Republic of China; Key Laboratory of Acupuncture and Medicine (B.-M.Z.), Nanjing University of Traditional Chinese Medicine, Nanjing 210046, Republic of China; and New York State Center of Excellence in Bioinformatics and Life Sciences (R.M.G.), Department of Biochemistry, Developmental Genomics Group, University at Buffalo, Buffalo, New York 14203.

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http://dx.doi.org/10.1210/me.2012-1387DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4004779PMC
May 2014

MiR-21 is under control of STAT5 but is dispensable for mammary development and lactation.

PLoS One 2014 30;9(1):e85123. Epub 2014 Jan 30.

Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0085123PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3907398PMC
December 2014

Mammary-specific gene activation is defined by progressive recruitment of STAT5 during pregnancy and the establishment of H3K4me3 marks.

Mol Cell Biol 2014 Feb 25;34(3):464-73. Epub 2013 Nov 25.

Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland, USA.

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http://dx.doi.org/10.1128/MCB.00988-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3911501PMC
February 2014

Comprehensive meta-analysis of Signal Transducers and Activators of Transcription (STAT) genomic binding patterns discerns cell-specific cis-regulatory modules.

BMC Genomics 2013 Jan 16;14. Epub 2013 Jan 16.

Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, 8 Center Drive, Bethesda, MD 20892-0822, USA.

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http://dx.doi.org/10.1186/1471-2164-14-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3564941PMC
January 2013

Sequential activation of genetic programs in mouse mammary epithelium during pregnancy depends on STAT5A/B concentration.

Nucleic Acids Res 2013 Feb 28;41(3):1622-36. Epub 2012 Dec 28.

Laboratory of Genetics and Physiology, National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20815, USA.

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http://dx.doi.org/10.1093/nar/gks1310DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561979PMC
February 2013

Human histone H3K79 methyltransferase DOT1L protein [corrected] binds actively transcribing RNA polymerase II to regulate gene expression.

J Biol Chem 2012 Nov 25;287(47):39698-709. Epub 2012 Sep 25.

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 305-701, Korea.

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http://dx.doi.org/10.1074/jbc.M112.384057DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3501035PMC
November 2012

Hrp3 controls nucleosome positioning to suppress non-coding transcription in eu- and heterochromatin.

EMBO J 2012 Nov 18;31(23):4375-87. Epub 2012 Sep 18.

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, Republic of Korea.

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http://emboj.embopress.org/cgi/doi/10.1038/emboj.2012.267
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http://dx.doi.org/10.1038/emboj.2012.267DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3512395PMC
November 2012

The liver-specific tumor suppressor STAT5 controls expression of the reactive oxygen species-generating enzyme NOX4 and the proapoptotic proteins PUMA and BIM in mice.

Hepatology 2012 Dec;56(6):2375-86

Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney Diseases, Bethesda, MD 20892-0822, USA.

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http://dx.doi.org/10.1002/hep.25900DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3505809PMC
December 2012

Retrotransposons as a major source of epigenetic variations in the mammalian genome.

Epigenetics 2012 Apr 1;7(4):370-82. Epub 2012 Apr 1.

Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, USA.

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http://dx.doi.org/10.4161/epi.19462DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368820PMC
April 2012

The miR-17/92 cluster is targeted by STAT5 but dispensable for mammary development.

Genesis 2012 Sep 31;50(9):665-71. Epub 2012 Mar 31.

Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892, USA.

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http://dx.doi.org/10.1002/dvg.22023DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3560854PMC
September 2012

Genome-wide analyses reveal the extent of opportunistic STAT5 binding that does not yield transcriptional activation of neighboring genes.

Nucleic Acids Res 2012 May 8;40(10):4461-72. Epub 2012 Feb 8.

Laboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA.

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https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/
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http://dx.doi.org/10.1093/nar/gks056DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3378893PMC
May 2012

Aebp2 as an epigenetic regulator for neural crest cells.

PLoS One 2011 19;6(9):e25174. Epub 2011 Sep 19.

Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0025174PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3176318PMC
February 2012

Transcriptional changes of secreted Wnt antagonists in hindlimb skeletal muscle during the lifetime of the C57BL/6J mouse.

Mech Ageing Dev 2011 Oct 9;132(10):511-4. Epub 2011 Aug 9.

Department of Biological Sciences, KAIST, Daejeon 305-701, South Korea.

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http://dx.doi.org/10.1016/j.mad.2011.07.007DOI Listing
October 2011

Transcriptional repression of repeat-derived transcripts correlates with histone hypoacetylation at repetitive DNA elements in aged mice brain.

Exp Gerontol 2011 Oct 18;46(10):811-8. Epub 2011 Jul 18.

Department of Biological Sciences, KAIST, Daejeon 305-701, South Korea.

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http://dx.doi.org/10.1016/j.exger.2011.07.001DOI Listing
October 2011

α1-3/4 fucosylation at Asn 241 of β-haptoglobin is a novel marker for colon cancer: a combinatorial approach for development of glycan biomarkers.

Int J Cancer 2012 May 22;130(10):2366-76. Epub 2011 Sep 22.

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, Republic of Korea.

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http://dx.doi.org/10.1002/ijc.26288DOI Listing
May 2012

Decoding the genome with an integrative analysis tool: combinatorial CRM Decoder.

Nucleic Acids Res 2011 Sep 30;39(17):e116. Epub 2011 Jun 30.

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, South Korea.

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http://dx.doi.org/10.1093/nar/gkr516DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3177223PMC
September 2011

YY1's role in DNA methylation of Peg3 and Xist.

Nucleic Acids Res 2009 Sep 23;37(17):5656-64. Epub 2009 Jul 23.

Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.

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http://dx.doi.org/10.1093/nar/gkp613DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2761279PMC
September 2009

AEBP2 as a potential targeting protein for Polycomb Repression Complex PRC2.

Nucleic Acids Res 2009 May 17;37(9):2940-50. Epub 2009 Mar 17.

Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.

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http://dx.doi.org/10.1093/nar/gkp149DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685092PMC
May 2009

Evolutionary Conserved Motif Finder (ECMFinder) for genome-wide identification of clustered YY1- and CTCF-binding sites.

Nucleic Acids Res 2009 Apr 10;37(6):2003-13. Epub 2009 Feb 10.

Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.

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http://dx.doi.org/10.1093/nar/gkp077DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2665242PMC
April 2009

RhoB is epigenetically regulated in an age- and tissue-specific manner.

Biochem Biophys Res Commun 2007 Oct 9;362(1):164-169. Epub 2007 Aug 9.

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, 335 Gwahangno, Yuseoung-gu, Daejeon 305-701, South Korea. Electronic address:

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http://dx.doi.org/10.1016/j.bbrc.2007.08.002DOI Listing
October 2007