Kenneth B Beckman

Kenneth B Beckman

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Kenneth B Beckman

Kenneth B Beckman

Publications by authors named "Kenneth B Beckman"

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Association between mitochondrial genetic variation and breast cancer risk: The Multiethnic Cohort.

PLoS One 2019 2;14(10):e0222284. Epub 2019 Oct 2.

Department of Epidemiology and Biostatistics, School of Medicine, University of California, San Francisco, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0222284PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6774509PMC
October 2019

Resequencing Study Confirms That Host Defense and Cell Senescence Gene Variants Contribute to the Risk of Idiopathic Pulmonary Fibrosis.

Authors:
Camille Moore Rachel Z Blumhagen Ivana V Yang Avram Walts Julie Powers Tarik Walker Makenna Bishop Pamela Russell Brian Vestal Jonathan Cardwell Cheryl R Markin Susan K Mathai Marvin I Schwarz Mark P Steele Joyce Lee Kevin K Brown James E Loyd James D Crapo Edwin K Silverman Michael H Cho Judith A James Joel M Guthridge Joy D Cogan Jonathan A Kropski Jeffrey J Swigris Carol Bair Dong Soon Kim Wonjun Ji Hocheol Kim Jin Woo Song Lisa A Maier Karin A Pacheco Nikhil Hirani Azin S Poon Feng Li R Gisli Jenkins Rebecca Braybrooke Gauri Saini Toby M Maher Philip L Molyneaux Peter Saunders Yingze Zhang Kevin F Gibson Daniel J Kass Mauricio Rojas John Sembrat Paul J Wolters Harold R Collard John S Sundy Thomas O'Riordan Mary E Strek Imre Noth Shwu-Fan Ma Mary K Porteous Maryl E Kreider Namrata B Patel Yoshikazu Inoue Masaki Hirose Toru Arai Shinobu Akagawa Oliver Eickelberg Isis Enlil Fernandez Jürgen Behr Nesrin Mogulkoc Tamera J Corte Ian Glaspole Sara Tomassetti Claudia Ravaglia Venerino Poletti Bruno Crestani Raphael Borie Caroline Kannengiesser Helen Parfrey Christine Fiddler Doris Rassl Maria Molina-Molina Carlos Machahua Ana Montes Worboys Gunnar Gudmundsson Helgi J Isaksson David J Lederer Anna J Podolanczuk Sydney B Montesi Elisabeth Bendstrup Vivi Danchel Moises Selman Annie Pardo Michael T Henry Michael P Keane Peter Doran Martina Vašáková Martina Sterclova Christopher J Ryerson Pearce G Wilcox Tsukasa Okamoto Haruhiko Furusawa Yasunari Miyazaki Geoffrey Laurent Svetlana Baltic Cecilia Prele Yuben Moodley Barry S Shea Ken Ohta Maho Suzukawa Osamu Narumoto Steven D Nathan Drew C Venuto Merte L Woldehanna Nurdan Kokturk Joao A de Andrade Tracy Luckhardt Tejaswini Kulkarni Francesco Bonella Seamus C Donnelly Aoife McElroy Michelle E Armstong Alvaro Aranda Roberto G Carbone Francesco Puppo Kenneth B Beckman Deborah A Nickerson Tasha E Fingerlin David A Schwartz

Am J Respir Crit Care Med 2019 Jul;200(2):199-208

1 National Jewish Health, Denver, Colorado.

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http://dx.doi.org/10.1164/rccm.201810-1891OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6635791PMC
July 2019

Evaluating the Information Content of Shallow Shotgun Metagenomics.

mSystems 2018 Nov-Dec;3(6). Epub 2018 Nov 13.

Department of Computer Science and Engineering, University of Minnesota, Minneapolis, Minnesota, USA.

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http://msystems.asm.org/lookup/doi/10.1128/mSystems.00069-18
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http://dx.doi.org/10.1128/mSystems.00069-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6234283PMC
November 2018

Single-Strand Consensus Sequencing Reveals that HIV Type but not Subtype Significantly Impacts Viral Mutation Frequencies and Spectra.

J Mol Biol 2017 07 11;429(15):2290-2307. Epub 2017 May 11.

Molecular, Cellular, Developmental Biology & Genetics Graduate Program, University of Minnesota-Twin Cities, Minneapolis, MN, 55455, USA; Institute for Molecular Virology, University of Minnesota-Twin Cities, Minneapolis, MN, 55455, USA; Division of Basic Sciences, School of Dentistry, University of Minnesota-Twin Cities, Minneapolis, MN, 55455, USA; Department of Microbiology & Immunology, University of Minnesota-Twin Cities, Minneapolis, MN, 55455, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jmb.2017.05.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5557043PMC
July 2017

Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies.

Nat Biotechnol 2016 09 25;34(9):942-9. Epub 2016 Jul 25.

University of Minnesota Genomics Center, Minneapolis, Minnesota, USA.

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http://dx.doi.org/10.1038/nbt.3601DOI Listing
September 2016

No Association between the Mitochondrial Genome and Prostate Cancer Risk: The Multiethnic Cohort.

Cancer Epidemiol Biomarkers Prev 2016 06 28;25(6):1001-3. Epub 2016 Mar 28.

Cancer Prevention Institute of California, Fremont, California. Stanford Cancer Institute, Palo Alto, California.

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http://dx.doi.org/10.1158/1055-9965.EPI-16-0111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4891274PMC
June 2016

Association of Genes, Pathways, and Haplogroups of the Mitochondrial Genome with the Risk of Colorectal Cancer: The Multiethnic Cohort.

PLoS One 2015 4;10(9):e0136796. Epub 2015 Sep 4.

Cancer Prevention Institute of California, Fremont, California, United States of America; Stanford Cancer Institute, Palo Alto, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0136796PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4560485PMC
May 2016

Next generation sequencing in endocrine practice.

Mol Genet Metab 2015 Jun-Jul;115(2-3):61-71. Epub 2015 May 3.

Department of Pediatrics, Division of Pediatric Endocrinology, University of Minnesota Masonic Children's Hospital, Minneapolis, MN 55454, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ymgme.2015.05.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4818590PMC
March 2016

Implementation of Cloud based next generation sequencing data analysis in a clinical laboratory.

BMC Res Notes 2014 May 23;7:314. Epub 2014 May 23.

Research Informatics Support Systems, Minnesota Supercomputing Institute, University of Minnesota, Room 599 Walter Library 117 Pleasant St SE, Minneapolis, MN 55455, USA.

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http://dx.doi.org/10.1186/1756-0500-7-314DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4036707PMC
May 2014

Genetic and environmental predictors of serum 25-hydroxyvitamin D concentrations among middle-aged and elderly Chinese in Singapore.

Br J Nutr 2013 Feb 15;109(3):493-502. Epub 2012 May 15.

University of Pittsburgh Cancer Institute, UPMC Cancer Pavillion, Suite 4C-464, 5150 Center Avenue, Pittsburgh, PA 15232, USA.

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http://www.journals.cambridge.org/abstract_S0007114512001675
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http://dx.doi.org/10.1017/S0007114512001675DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3442149PMC
February 2013

Development and initial characterization of a HAPPY panel for mapping the X. tropicalis genome.

Int J Biol Sci 2011 24;7(7):1037-44. Epub 2011 Aug 24.

Department of Animal Sciences, Washington State University, Pullman, WA 99164-6351, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3164153PMC
http://dx.doi.org/10.7150/ijbs.7.1037DOI Listing
January 2012

European ancestry is positively associated with breast cancer risk in Mexican women.

Cancer Epidemiol Biomarkers Prev 2010 Apr 23;19(4):1074-82. Epub 2010 Mar 23.

Division of General Internal Medicine, Department of Medicine, Institute for Human Genetics, University of California, San Francisco, California, USA.

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http://cebp.aacrjournals.org/cgi/doi/10.1158/1055-9965.EPI-0
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http://dx.doi.org/10.1158/1055-9965.EPI-09-1193DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2852491PMC
April 2010

Using DNA pools for genotyping trios.

Nucleic Acids Res 2006 4;34(19):e129. Epub 2006 Oct 4.

Children's Hospital Oakland Research Institute, 5700 Martin Luther King Jr Way, Oakland, CA 94609, USA.

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http://dx.doi.org/10.1093/nar/gkl700DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1636483PMC
December 2006

Germ-line epigenetic modification of the murine A vy allele by nutritional supplementation.

Proc Natl Acad Sci U S A 2006 Nov 13;103(46):17308-12. Epub 2006 Nov 13.

Victor Chang Cardiac Research Institute, 384 Victoria Street, Darlinghurst 2010, Sydney, Australia.

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http://dx.doi.org/10.1073/pnas.0607090103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1838538PMC
November 2006

Gene expression profiling in mitochondrial disease: assessment of microarray accuracy by high-throughput Q-PCR.

Mitochondrion 2004 Sep 30;4(5-6):453-70. Epub 2004 Sep 30.

Gorilla Genomics Inc., 851 Midway, Suite 201, Alameda, CA 94501, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S156772490400137
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http://dx.doi.org/10.1016/j.mito.2004.07.029DOI Listing
September 2004