Publications by authors named "Katherine J L Jackson"

39Publications

Human B Cell Clonal Expansion and Convergent Antibody Responses to SARS-CoV-2.

Cell Host Microbe 2020 10 3;28(4):516-525.e5. Epub 2020 Sep 3.

Department of Pathology, Stanford University, Stanford, CA 94305, USA; Sean N. Parker Center for Allergy and Asthma Research, Stanford University School of Medicine, Stanford, CA, 94305, USA. Electronic address:

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October 2020

A Proposed New Nomenclature for the Immunoglobulin Genes of .

Front Immunol 2019 18;10:2961. Epub 2019 Dec 18.

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW, Australia.

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November 2020

Next-Generation Sequencing of Antibody Display Repertoires.

Front Immunol 2018 2;9:118. Epub 2018 Feb 2.

Garvan Institute of Medical Research, Sydney, NSW, Australia.

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March 2019

On being the right size: antibody repertoire formation in the mouse and human.

Immunogenetics 2018 03 19;70(3):143-158. Epub 2017 Dec 19.

Garvan Institute of Medical Research, Darlinghurst, 2010, Australia.

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March 2018

Broadening Horizons: New Antibodies Against Influenza.

Cell 2016 Jul;166(3):532-533

Department of Pathology, Stanford University, CA 94305, USA. Electronic address:

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July 2016

DJ Pairing during VDJ Recombination Shows Positional Biases That Vary among Individuals with Differing IGHD Locus Immunogenotypes.

J Immunol 2016 Feb 23;196(3):1158-64. Epub 2015 Dec 23.

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Kensington, Sydney, New South Wales 2052, Australia; and

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February 2016

Laboratory and Data Analysis Methods for Characterization of Human B Cell Repertoires by High-Throughput DNA Sequencing.

Methods Mol Biol 2015 ;1343:219-33

Department of Pathology, Stanford University, 300 Pasteur Drive, Stanford, CA, 94305, USA.

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June 2016

The mouse antibody heavy chain repertoire is germline-focused and highly variable between inbred strains.

Philos Trans R Soc Lond B Biol Sci 2015 Sep;370(1676)

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, 2052 NSW, Australia Department of Pathology, School of Medicine, Stanford University, Stanford, CA 94305-5324, USA.

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September 2015

Flexible, fast and accurate sequence alignment profiling on GPGPU with PaSWAS.

PLoS One 2015 1;10(4):e0122524. Epub 2015 Apr 1.

Institute for Life Science & Technology & Hanze Research Center Energy, Hanze University of Applied Sciences Groningen, 9747 AS, Zernikeplein 11, Groningen, The Netherlands.

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February 2016

Ability to develop broadly neutralizing HIV-1 antibodies is not restricted by the germline Ig gene repertoire.

J Immunol 2015 May 30;194(9):4371-8. Epub 2015 Mar 30.

Centre for HIV and Sexually Transmitted Infections, National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg 2131, South Africa; Division of Virology and Communicable Disease Surveillance, School of Pathology, University of the Witwatersrand, Johannesburg 2050, South Africa; Centre for the AIDS Programme of Research in South Africa, KwaZulu-Natal 4013, South Africa;

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May 2015

Predicting vaccine responsiveness.

Cell Host Microbe 2015 Mar;17(3):301-307

Department of Pathology, Stanford University, Stanford, CA 94305.

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March 2015

HIV-1 envelope gp41 antibodies can originate from terminal ileum B cells that share cross-reactivity with commensal bacteria.

Cell Host Microbe 2014 Aug;16(2):215-226

Duke Human Vaccine Institute, Duke University School of Medicine and Duke Global Health Institute, Durham, NC 27710, USA; Department of Immunology, Duke University School of Medicine and Duke Global Health Institute, Durham, NC 27710, USA; Department of Medicine, Duke University School of Medicine and Duke Global Health Institute, Durham, NC 27710, USA. Electronic address:

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August 2014

Human immunoglobulin classes and subclasses show variability in VDJ gene mutation levels.

Immunol Cell Biol 2014 Sep 10;92(8):729-33. Epub 2014 Jun 10.

School of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney, New South Wales, Australia.

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September 2014

IgE-associated IGHV genes from venom and peanut allergic individuals lack mutational evidence of antigen selection.

PLoS One 2014 25;9(2):e89730. Epub 2014 Feb 25.

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, Australia.

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January 2015

The shape of the lymphocyte receptor repertoire: lessons from the B cell receptor.

Front Immunol 2013 Sep 2;4:263. Epub 2013 Sep 2.

School of Biotechnology and Biomolecular Sciences, University of New South Wales , Sydney, NSW , Australia.

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September 2013

A Temporal Model of Human IgE and IgG Antibody Function.

Front Immunol 2013 9;4:235. Epub 2013 Aug 9.

School of Biotechnology and Biomolecular Sciences, University of New South Wales , Sydney, NSW , Australia.

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August 2013

Benchmarking the performance of human antibody gene alignment utilities using a 454 sequence dataset.

Bioinformatics 2010 Dec 29;26(24):3129-30. Epub 2010 Oct 29.

School of Computer Science and Engineering, University of New South Wales, Sydney, NSW, Australia.

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December 2010

Many human immunoglobulin heavy-chain IGHV gene polymorphisms have been reported in error.

Immunol Cell Biol 2008 Feb 27;86(2):111-5. Epub 2007 Nov 27.

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Kensington, New South Wales, Australia.

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February 2008

Identifying highly mutated IGHD genes in the junctions of rearranged human immunoglobulin heavy chain genes.

J Immunol Methods 2007 Jul 15;324(1-2):26-37. Epub 2007 May 15.

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, Australia.

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July 2007

iHMMune-align: hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequences.

Bioinformatics 2007 Jul 26;23(13):1580-7. Epub 2007 Apr 26.

School of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney, NSW 2052, Australia.

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July 2007

Use of IGHJ and IGHD gene mutations in analysis of immunoglobulin sequences for the prognosis of chronic lymphocytic leukemia.

Leuk Res 2007 Sep 13;31(9):1247-52. Epub 2006 Dec 13.

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Kensington, Sydney, NSW 2052, Australia.

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September 2007

Exonuclease activity and P nucleotide addition in the generation of the expressed immunoglobulin repertoire.

BMC Immunol 2004 Sep 2;5:19. Epub 2004 Sep 2.

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, Australia.

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September 2004