Kate Baker

Kate Baker

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Kate Baker

Kate Baker

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Functional network dynamics in a neurodevelopmental disorder of known genetic origin.

Hum Brain Mapp 2020 Feb 22;41(2):530-544. Epub 2019 Oct 22.

MRC Cognition and Brain Sciences Unit, University of Cambridge, Cambridge, UK.

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http://dx.doi.org/10.1002/hbm.24820DOI Listing
February 2020

Persistent transmission of shigellosis in England is associated with a recently emerged multi-drug resistant strain of .

J Clin Microbiol 2020 Jan 22. Epub 2020 Jan 22.

National Infection Service, Public Health England, London, United Kingdom.

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http://dx.doi.org/10.1128/JCM.01692-19DOI Listing
January 2020

Serovar Panama, an Understudied Serovar Responsible for Extraintestinal Salmonellosis Worldwide.

Infect Immun 2019 09 21;87(9). Epub 2019 Aug 21.

Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Liverpool, United Kingdom

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http://dx.doi.org/10.1128/IAI.00273-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6704606PMC
September 2019

Looking Backward To Move Forward: the Utility of Sequencing Historical Bacterial Genomes.

J Clin Microbiol 2019 Aug 26;57(8). Epub 2019 Jul 26.

Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Liverpool, United Kingdom

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http://jcm.asm.org/lookup/doi/10.1128/JCM.00100-19
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http://dx.doi.org/10.1128/JCM.00100-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6663899PMC
August 2019

Demodicosis in a captive African straw-coloured fruit bat (Eidolon helvum).

Exp Appl Acarol 2019 Aug 9;78(4):547-554. Epub 2019 Jul 9.

Pathology Department, Animal and Plant Health Agency (APHA-Weybridge), Woodham Lane, Addlestone, Surrey, KT15 3NB, UK.

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http://dx.doi.org/10.1007/s10493-019-00399-9DOI Listing
August 2019

STXBP1-associated neurodevelopmental disorder: a comparative study of behavioural characteristics.

J Neurodev Disord 2019 Aug 6;11(1):17. Epub 2019 Aug 6.

MRC Cognition and Brain Sciences Unit, University of Cambridge, 15 Chaucer Road, Cambridge, CB2 7EF, UK.

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http://dx.doi.org/10.1186/s11689-019-9278-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6683428PMC
August 2019

The diversity, evolution and ecology of Salmonella in venomous snakes.

PLoS Negl Trop Dis 2019 06 4;13(6):e0007169. Epub 2019 Jun 4.

Department of Functional and Comparative Genomics, Institute of Integrative Biology, University of Liverpool, Liverpool, United Kingdom.

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http://dx.doi.org/10.1371/journal.pntd.0007169DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6548357PMC
June 2019

Structural brain abnormalities in a single gene disorder associated with epilepsy, language impairment and intellectual disability.

Neuroimage Clin 2016 4;12:655-665. Epub 2016 Aug 4.

MRC Cognition & Brain Sciences Unit, Cambridge, United Kingdom; Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, United Kingdom.

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http://dx.doi.org/10.1016/j.nicl.2016.07.016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5053034PMC
February 2018

Effects of Colored Enrichment Devices on Circadian Metabolism and Physiology in Male Sprague-Dawley Rats.

Comp Med 2016 ;66(5):384-391

Division of Veterinary Medicine, Tulane National Primate Research Center, Covington, Louisiana, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5073063PMC
December 2017

Pair housing of Vervets/African Green Monkeys for biomedical research.

Am J Primatol 2017 Jan 5;79(1):1-10. Epub 2015 Nov 5.

Animal Resources Branch, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia.

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http://dx.doi.org/10.1002/ajp.22501DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4860176PMC
January 2017

The well-being of laboratory non-human primates.

Am J Primatol 2017 Jan 7;79(1):1-5. Epub 2016 Jan 7.

Laboratory of Comparative Ethology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Poolesville, Maryland.

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http://dx.doi.org/10.1002/ajp.22520DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4936960PMC
January 2017

Mesenchymal Stem Cells Yield Transient Improvements in Motor Function in an Infant Rhesus Macaque with Severe Early-Onset Krabbe Disease.

Stem Cells Transl Med 2017 01 24;6(1):99-109. Epub 2016 Aug 24.

Department of Molecular Therapeutics, The Scripps Research Institute-Scripps Florida, Jupiter, Florida, USA.

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http://dx.doi.org/10.5966/sctm.2015-0317DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5442751PMC
January 2017

Strain 2308 Wisconsin Genome: Importance of the Definition of Reference Strains.

Front Microbiol 2016 29;7:1557. Epub 2016 Sep 29.

Programa de Investigación en Enfermedades Tropicales, Escuela de Medicina Veterinaria, Universidad Nacional de Costa RicaHeredia, Costa Rica; Centro de Investigación en Enfermedades Tropicales, Facultad de Microbiología, Universidad de Costa RicaSan José, Costa Rica.

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http://dx.doi.org/10.3389/fmicb.2016.01557DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5041503PMC
September 2016

Survey of 2014 behavioral management programs for laboratory primates in the United States.

Authors:
Kate C Baker

Am J Primatol 2016 Jul 11;78(7):780-96. Epub 2016 Mar 11.

Division of Veterinary Medicine, Tulane National Primate Research Center, Covington, Louisiana.

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http://dx.doi.org/10.1002/ajp.22543DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4914436PMC
July 2016

Pharmacologic rationale for the NK1R antagonist, aprepitant as adjunctive therapy in HIV.

J Transl Med 2016 05 26;14(1):148. Epub 2016 May 26.

Division of Allergy and Immunology, The Children's Hospital of Philadelphia Research Institute, Philadelphia, PA, 19104, USA.

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http://dx.doi.org/10.1186/s12967-016-0904-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4880976PMC
May 2016

Naltrexone treatment reverses astrocyte atrophy and immune dysfunction in self-harming macaques.

Brain Behav Immun 2015 Nov 17;50:288-297. Epub 2015 Jul 17.

Tulane National Primate Research Center, Covington, LA, USA; Tulane Program in Biomedical Science, Tulane University School of Medicine, New Orleans, LA, USA; Tulane Program in Neuroscience, Tulane University, New Orleans, LA, USA; Department of Microbiology & Immunology, Tulane University School of Medicine, New Orleans, LA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.bbi.2015.07.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4631668PMC
November 2015

Epilepsy, cognitive deficits and neuroanatomy in males with ZDHHC9 mutations.

Ann Clin Transl Neurol 2015 May 9;2(5):559-69. Epub 2015 Apr 9.

Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge Cambridge, United Kingdom.

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http://dx.doi.org/10.1002/acn3.196DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4435709PMC
May 2015

Cognitive training enhances intrinsic brain connectivity in childhood.

J Neurosci 2015 Apr;35(16):6277-83

Oxford Centre for Human Brain Activity, University of Oxford, Oxford OX3 7JX, United Kingdom.

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http://dx.doi.org/10.1523/JNEUROSCI.4517-14.2015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4405549PMC
April 2015

Annual research review: Rare genotypes and childhood psychopathology--uncovering diverse developmental mechanisms of ADHD risk.

J Child Psychol Psychiatry 2015 Mar 12;56(3):251-73. Epub 2014 Dec 12.

Department of Experimental Psychology, University of Oxford, Oxford, UK.

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http://doi.wiley.com/10.1111/jcpp.12374
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http://dx.doi.org/10.1111/jcpp.12374DOI Listing
March 2015

A high-resolution genomic analysis of multidrug-resistant hospital outbreaks of Klebsiella pneumoniae.

EMBO Mol Med 2015 Mar;7(3):227-39

The Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam Centre for Tropical Medicine, Nuffield Department of Clinical Medicine, Oxford University, Oxford, UK The London School of Hygiene and Tropical Medicine, London, UK

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http://dx.doi.org/10.15252/emmm.201404767DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4364942PMC
March 2015

Psychopathology and cognitive performance in individuals with membrane-associated guanylate kinase mutations: a functional network phenotyping study.

J Neurodev Disord 2015 27;7(1). Epub 2015 Feb 27.

Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY UK.

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http://dx.doi.org/10.1186/s11689-015-9105-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4369839PMC
March 2015

Demystifying Escherichia coli pathovars.

Authors:
Kate S Baker

Nat Rev Microbiol 2015 Jan 8;13(1). Epub 2014 Dec 8.

Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

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http://dx.doi.org/10.1038/nrmicro3411DOI Listing
January 2015

The extant World War 1 dysentery bacillus NCTC1: a genomic analysis.

Lancet 2014 Nov 7;384(9955):1691-7. Epub 2014 Nov 7.

Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, UK; Department of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, UK. Electronic address:

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http://dx.doi.org/10.1016/S0140-6736(14)61789-XDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4226921PMC
November 2014

Bacillary dysentery from World War 1 and NCTC1, the first bacterial isolate in the National Collection.

Lancet 2014 Nov 7;384(9955):1720. Epub 2014 Nov 7.

Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK; Department of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, UK. Electronic address:

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http://dx.doi.org/10.1016/S0140-6736(14)61790-6DOI Listing
November 2014

Chromosomal microarray analysis-a routine clinical genetic test for patients with schizophrenia.

Lancet Psychiatry 2014 Oct 5;1(5):329-31. Epub 2014 Sep 5.

Clinical Genetics Research Program, Centre for Addiction and Mental Health, Toronto, Ontario, Canada; The Dalglish Family Hearts and Minds Clinic for Adults with 22q11.2 Deletion Syndrome, University Health Network, Toronto, Ontario, Canada; Department of Psychiatry, University of Toronto Faculty of Medicine, Toronto, Ontario, Canada.

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http://dx.doi.org/10.1016/S2215-0366(14)70308-6DOI Listing
October 2014

TB or not TB? Genomic portraits provide answers.

Nat Rev Microbiol 2014 Jun 7;12(6):398. Epub 2014 May 7.

Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

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http://www.nature.com/articles/nrmicro3273
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http://dx.doi.org/10.1038/nrmicro3273DOI Listing
June 2014

Videotaped behavior as a predictor of clinical outcome in rhesus macaques (Macaca mulatta).

Comp Med 2014 Jun;64(3):193-9

Division of Veterinary Medicine, Tulane National Primate Research Center, Covington, Louisiana, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4067583PMC
June 2014

Poxviruses in bats … so what?

Viruses 2014 Apr 3;6(4):1564-77. Epub 2014 Apr 3.

University of Glasgow Centre for Virus Research, Institute of Infection, Inflammation and Immunity, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G61 1QH, UK.

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http://dx.doi.org/10.3390/v6041564DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4014710PMC
April 2014

Comparing options for pair housing rhesus macaques using behavioral welfare measures.

Am J Primatol 2014 Jan 16;76(1):30-42. Epub 2013 Sep 16.

Tulane National Primate Research Center, Tulane University, Covington, Louisiana.

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http://dx.doi.org/10.1002/ajp.22190DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4314936PMC
January 2014

Use of cross-reactive serological assays for detecting novel pathogens in wildlife: assessing an appropriate cutoff for henipavirus assays in African bats.

J Virol Methods 2013 Nov 5;193(2):295-303. Epub 2013 Jul 5.

Department of Veterinary Medicine, University of Cambridge, Cambridge CB3 0ES, UK; Institute of Zoology, Zoological Society of London, Regent's Park, London NW1 4RY, UK. Electronic address:

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http://dx.doi.org/10.1016/j.jviromet.2013.06.030DOI Listing
November 2013

Pair housing for female longtailed and rhesus macaques in the laboratory: behavior in protected contact versus full contact.

J Appl Anim Welf Sci 2012 ;15(2):126-43

Tulane National Primate Research Center, Tulane University, 18703 Three Rivers Road, Covington, LA 70433, USA.

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http://dx.doi.org/10.1080/10888705.2012.658330DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3994748PMC
September 2012

A high-density EEG investigation into steady state binaural beat stimulation.

PLoS One 2012 9;7(4):e34789. Epub 2012 Apr 9.

Brain and Psychological Sciences Research Centre, Swinburne University of Technology, Hawthorn, Victoria, Australia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0034789PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3322125PMC
August 2012

Effects of extended-release injectable naltrexone on self-injurious behavior in rhesus macaques (Macaca mulatta).

Comp Med 2012 Jun;62(3):209-17

Division of Veterinary Medicine, Tulane National Primate Research Center, Covington, Louisiana, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3364699PMC
June 2012

Genetic investigation for adults with intellectual disability: opportunities and challenges.

Curr Opin Neurol 2012 Apr;25(2):150-8

Department of Medical Genetics, University of Cambridge, UK.

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http://dx.doi.org/10.1097/WCO.0b013e328351820eDOI Listing
April 2012

Is there a core neuropsychiatric phenotype in 22q11.2 deletion syndrome?

Curr Opin Neurol 2012 Apr;25(2):131-7

Department of Medical Genetics, University of Cambridge, UK.

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http://dx.doi.org/10.1097/WCO.0b013e328352dd58DOI Listing
April 2012

Benefits of pair housing are consistent across a diverse population of rhesus macaques.

Appl Anim Behav Sci 2012 Mar;137(3-4):148-156

Tulane National Primate Research Center, 18703 Three Rivers Road, Covington, LA 70433, USA.

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http://dx.doi.org/10.1016/j.applanim.2011.09.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4307811PMC
March 2012

Manzanita wood: a sanitizable enrichment option for nonhuman primates.

J Am Assoc Lab Anim Sci 2011 Nov;50(6):884-7

Division of Veterinary Medicine, Tulane National Primate Research Center, Covington, Louisiana, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3228925PMC
November 2011

Application of the diagnostic evaluation for alopecia in traditional veterinary species to laboratory rhesus macaques (Macaca mulatta).

J Am Assoc Lab Anim Sci 2011 Nov;50(6):926-38

Division of Veterinary Medicine, Tulane National Primate Research Center, Covington, Louisiana, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3228933PMC
November 2011

Social buffering in adult male rhesus macaques (Macaca mulatta): Effects of stressful events in single vs. pair housing.

J Med Primatol 2011 Apr 8;40(2):71-8. Epub 2010 Sep 8.

Division of Veterinary Medicine, Tulane National Primate Research Center, Covington, LA, USA.

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http://dx.doi.org/10.1111/j.1600-0684.2010.00447.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3058767PMC
April 2011

Neuroanatomy in adolescents and young adults with 22q11 deletion syndrome: comparison to an IQ-matched group.

Neuroimage 2011 Mar 22;55(2):491-9. Epub 2010 Dec 22.

Behavioural and Brain Sciences Unit, UCL Institute of Child Health, London, UK.

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http://dx.doi.org/10.1016/j.neuroimage.2010.12.041DOI Listing
March 2011

Neocortical and hippocampal volume loss in a human ciliopathy: A quantitative MRI study in Bardet-Biedl syndrome.

Am J Med Genet A 2011 Jan 17;155A(1):1-8. Epub 2010 Nov 17.

UCL Institute of Child Health, London, UK.

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http://dx.doi.org/10.1002/ajmg.a.33773DOI Listing
January 2011

Making sense of cilia in disease: the human ciliopathies.

Am J Med Genet C Semin Med Genet 2009 Nov;151C(4):281-95

UCL Institute of Child Health, 30 Guilford Street, London WC1N 1EH, UK.

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http://doi.wiley.com/10.1002/ajmg.c.30231
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http://dx.doi.org/10.1002/ajmg.c.30231DOI Listing
November 2009

Functional principal component data analysis: a new method for analysing microbial community fingerprints.

J Microbiol Methods 2009 Oct 23;79(1):89-95. Epub 2009 Aug 23.

Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB243UU, UK.

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http://www.abdn.ac.uk/staffpages/uploads/mbi010/Journal%20of
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http://linkinghub.elsevier.com/retrieve/pii/S016770120900258
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http://dx.doi.org/10.1016/j.mimet.2009.08.010DOI Listing
October 2009

Physiological and behavioral effects of social introduction on adult male rhesus macaques.

Am J Primatol 2008 Jun;70(6):542-50

Division of Veterinary Medicine, Tulane National Primate Research Center, Covington, Louisiana 70433, USA.

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http://dx.doi.org/10.1002/ajp.20526DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2863312PMC
June 2008

Age- and dose-related effects on MSC engraftment levels and anatomical distribution in the central nervous systems of nonhuman primates: identification of novel MSC subpopulations that respond to guidance cues in brain.

Stem Cells 2007 Dec 11;25(12):3261-70. Epub 2007 Oct 11.

Center for Gene Therapy, Tulane University Health Sciences Center, 1430 Tulane Avenue, New Orleans, Louisiana 70112, USA.

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http://dx.doi.org/10.1634/stemcells.2007-0543DOI Listing
December 2007

Effect of ketamine anesthesia on daily food intake in Macaca mulatta and Cercopithecus aethiops.

Am J Primatol 2007 Oct;69(10):1080-92

National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, Maryland, USA.

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http://dx.doi.org/10.1002/ajp.20421DOI Listing
October 2007

Enrichment and primate centers: closing the gap between research and practice.

Authors:
Kate Baker

J Appl Anim Welf Sci 2007 ;10(1):49-54

Tulane National Primate Research Center, Covington, Louisiana 70433, USA.

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http://dx.doi.org/10.1080/10888700701277618DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2863298PMC
May 2007

"Primatology" panel discussion.

J Appl Anim Welf Sci 2007 ;10(1):83-6

Tulane National Primate Research Center, Covington, Louisiana 70433, USA.

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http://www.tandfonline.com/doi/abs/10.1080/10888700701277733
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http://dx.doi.org/10.1080/10888700701277733DOI Listing
May 2007

Survey of environmental enhancement programs for laboratory primates.

Am J Primatol 2007 Apr;69(4):377-94

Division of Veterinary Medicine, Tulane National Primate Research Center, Covington, Louisiana 70433, USA.

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http://dx.doi.org/10.1002/ajp.20347DOI Listing
April 2007

Preclinical evaluation of adult stem cell engraftment and toxicity in the CNS of rhesus macaques.

Mol Ther 2006 Jun 21;13(6):1173-84. Epub 2006 Feb 21.

Center for Gene Therapy, Tulane University Health Science Center, New Orleans, LA 70112, USA.

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http://dx.doi.org/10.1016/j.ymthe.2005.12.014DOI Listing
June 2006

Frequency of feeding enrichment and response of laboratory nonhuman primates to unfamiliar people.

J Am Assoc Lab Anim Sci 2006 Jan;45(1):69-73

Tulane National Primate Research Center, Veterinary Medicine, Covington, LA, USA.

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January 2006