Karsten Krug

Karsten Krug

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Karsten Krug

Karsten Krug

Publications by authors named "Karsten Krug"

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Antibodies to biotin enable large-scale detection of biotinylation sites on proteins.

Nat Methods 2017 Dec 16;14(12):1167-1170. Epub 2017 Oct 16.

Proteomics, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1038/nmeth.4465DOI Listing
December 2017

Methods, Tools and Current Perspectives in Proteogenomics.

Mol Cell Proteomics 2017 06 29;16(6):959-981. Epub 2017 Apr 29.

§The Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142;

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http://dx.doi.org/10.1074/mcp.MR117.000024DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5461547PMC
June 2017

TOR complex 2 localises to the cytokinetic actomyosin ring and controls the fidelity of cytokinesis.

J Cell Sci 2016 07 20;129(13):2613-24. Epub 2016 May 20.

Faculty of Life Sciences, University of Manchester, Oxford Road, Manchester M13 9PT, UK Flinders Centre for Innovation in Cancer, School of Medicine, Flinders University, Adelaide, SA 5001, Australia South Australia Health and Medical Research Institute, North Terrace, PO Box 11060, Adelaide, SA 5000, Australia

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http://dx.doi.org/10.1242/jcs.190124DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4958305PMC
July 2016

Phosphoproteome dynamics mediate revival of bacterial spores.

BMC Biol 2015 Sep 17;13:76. Epub 2015 Sep 17.

Department of Microbiology and Molecular Genetics, Institute for Medical Research Israel-Canada (IMRIC), The Hebrew University-Hadassah Medical School, The Hebrew University of Jerusalem, POB 12272, 91120, Jerusalem, Israel.

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http://dx.doi.org/10.1186/s12915-015-0184-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4574613PMC
September 2015

Characterization of the E. coli proteome and its modifications during growth and ethanol stress.

Front Microbiol 2015 18;6:103. Epub 2015 Feb 18.

Proteome Center Tuebingen, University of Tuebingen Tuebingen, Germany.

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http://dx.doi.org/10.3389/fmicb.2015.00103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4332353PMC
March 2015

Construction and assessment of individualized proteogenomic databases for large-scale analysis of nonsynonymous single nucleotide variants.

Proteomics 2014 Dec 17;14(23-24):2699-708. Epub 2014 Nov 17.

Proteome Center Tuebingen, University of Tuebingen, Germany.

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http://doi.wiley.com/10.1002/pmic.201400219
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http://dx.doi.org/10.1002/pmic.201400219DOI Listing
December 2014

Quantitative phosphoproteome analysis of Bacillus subtilis reveals novel substrates of the kinase PrkC and phosphatase PrpC.

Mol Cell Proteomics 2014 Aug 5;13(8):1965-78. Epub 2014 Jan 5.

From the ‡Proteome Center Tuebingen, Interfaculty Institute for Cell Biology, University of Tuebingen, Germany;

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http://dx.doi.org/10.1074/mcp.M113.035949DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4125730PMC
August 2014

Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Mol Cell Proteomics 2014 Aug 23;13(8):1925-36. Epub 2014 Apr 23.

From the ‡ Proteome Center Tuebingen, University of Tuebingen, Tuebingen 72076, Germany,

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http://www.mcponline.org/lookup/doi/10.1074/mcp.M113.035824
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http://dx.doi.org/10.1074/mcp.M113.035824DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4125727PMC
August 2014

The neuropeptide complement of the marine annelid Platynereis dumerilii.

BMC Genomics 2013 Dec 20;14:906. Epub 2013 Dec 20.

Max Planck Institute for Developmental Biology, Spemannstrasse 35, 72076, Tübingen, Germany.

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http://dx.doi.org/10.1186/1471-2164-14-906DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3890597PMC
December 2013

Deep coverage of the Escherichia coli proteome enables the assessment of false discovery rates in simple proteogenomic experiments.

Mol Cell Proteomics 2013 Nov 1;12(11):3420-30. Epub 2013 Aug 1.

Proteome Center Tuebingen, University of Tuebingen, 72076 Tuebingen, Germany.

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http://dx.doi.org/10.1074/mcp.M113.029165DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3820952PMC
November 2013

Global dynamics of the Escherichia coli proteome and phosphoproteome during growth in minimal medium.

J Proteome Res 2013 Jun 2;12(6):2611-21. Epub 2013 May 2.

Proteome Center Tuebingen, University of Tuebingen, Germany.

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http://dx.doi.org/10.1021/pr3011843DOI Listing
June 2013

Phosphoproteome of Pristionchus pacificus provides insights into architecture of signaling networks in nematode models.

Mol Cell Proteomics 2012 Dec 25;11(12):1631-9. Epub 2012 Aug 25.

Department for Evolutionary Biology, Max Planck Institute for Developmental Biology, Tuebingen, Germany.

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http://dx.doi.org/10.1074/mcp.M112.022103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3518110PMC
December 2012

Analysis of the Plasmodium falciparum proteasome using Blue Native PAGE and label-free quantitative mass spectrometry.

Amino Acids 2012 Sep 22;43(3):1119-29. Epub 2012 Jul 22.

Proteome Center Tübingen, Interfaculty Institute for Cell Biology, University of Tübingen, Auf der Morgenstelle 15, Tübingen, Germany.

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http://dx.doi.org/10.1007/s00726-012-1296-9DOI Listing
September 2012

Mitotic substrates of the kinase aurora with roles in chromatin regulation identified through quantitative phosphoproteomics of fission yeast.

Sci Signal 2011 Jun 28;4(179):rs6. Epub 2011 Jun 28.

Friedrich Miescher Laboratory of the Max Planck Society, 72076 Tuebingen, Germany.

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http://dx.doi.org/10.1126/scisignal.2001588DOI Listing
June 2011

Extending SILAC to proteomics of plant cell lines.

Plant Cell 2011 May 3;23(5):1701-5. Epub 2011 May 3.

Proteome Center Tuebingen, University of Tuebingen, Tuebingen, Germany.

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http://dx.doi.org/10.1105/tpc.110.082016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3123941PMC
May 2011

Extending SILAC to proteomics of plant cell lines.

Plant Cell 2011 May 3;23(5):1701-5. Epub 2011 May 3.

Proteome Center Tuebingen, University of Tuebingen, Tuebingen, Germany.

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http://dx.doi.org/10.1105/tpc.110.082016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3123941PMC
May 2011

Mass spectrometry at the interface of proteomics and genomics.

Mol Biosyst 2011 Feb 21;7(2):284-91. Epub 2010 Oct 21.

Proteome Center Tuebingen, Interdepartmental Institute for Cell Biology, University of Tuebingen, Auf der Morgenstelle 15, 72076 Tuebingen, Germany.

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http://dx.doi.org/10.1039/c0mb00168fDOI Listing
February 2011

Regulation of the maize (Zea mays L.) embryo proteome by RTCS which controls seminal root initiation.

Eur J Cell Biol 2010 Feb-Mar;89(2-3):242-9. Epub 2009 Dec 3.

ZMBP, Center for Plant Molecular Biology, Department of General Genetics, University of Tübingen, Tübingen, Germany.

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http://dx.doi.org/10.1016/j.ejcb.2009.11.014DOI Listing
June 2010

Proteogenomics of Pristionchus pacificus reveals distinct proteome structure of nematode models.

Genome Res 2010 Jun 17;20(6):837-46. Epub 2010 Mar 17.

Department for Evolutionary Biology, Max Planck Institute for Developmental Biology, 72076 Tübingen, Germany.

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http://dx.doi.org/10.1101/gr.103119.109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2877580PMC
June 2010