Karla Sandoval

Paleogenomic insights into the red complex bacteria in Pre-Hispanic and Colonial individuals from Mexico.

Philos Trans R Soc Lond B Biol Sci 2020 11 5;375(1812):20190580. Epub 2020 Oct 5.

International Laboratory for Human Genome Research, National Autonomous University of México (UNAM), Querétaro, 76230, Mexico.

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November 2020

Native American gene flow into Polynesia predating Easter Island settlement.

Nature 2020 07 8;583(7817):572-577. Epub 2020 Jul 8.

National Laboratory of Genomics for Biodiversity (LANGEBIO), Unit of Advanced Genomics, CINVESTAV, Irapuato, Mexico.

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July 2020

Development of a small panel of SNPs to infer ancestry in Chileans that distinguishes Aymara and Mapuche components.

Biol Res 2020 Apr 16;53(1):15. Epub 2020 Apr 16.

Programa de Genética Humana del ICBM, Facultad de Medicina, Universidad de Chile, Independencia 1027, Santiago, Chile.

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April 2020

Population History and Gene Divergence in Native Mexicans Inferred from 76 Human Exomes.

Authors:

María C Ávila-Arcos Kimberly F McManus Karla Sandoval Juan Esteban Rodríguez-Rodríguez Viridiana Villa-Islas Alicia R Martin Pierre Luisi Rosenda I Peñaloza-Espinosa Celeste Eng Scott Huntsman Esteban G Burchard Christopher R Gignoux Carlos D Bustamante Andrés Moreno-Estrada

Mol Biol Evol 2020 04;37(4):994-1006

National Laboratory of Genomics for Biodiversity (LANGEBIO), UGA, CINVESTAV, Irapuato, Guanajuato 36821, Mexico.

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April 2020

Genetic analyses of diverse populations improves discovery for complex traits.

Authors:

Genevieve L Wojcik Mariaelisa Graff Katherine K Nishimura Ran Tao Jeffrey Haessler Christopher R Gignoux Heather M Highland Yesha M Patel Elena P Sorokin Christy L Avery Gillian M Belbin Stephanie A Bien Iona Cheng Sinead Cullina Chani J Hodonsky Yao Hu Laura M Huckins Janina Jeff Anne E Justice Jonathan M Kocarnik Unhee Lim Bridget M Lin Yingchang Lu Sarah C Nelson Sung-Shim L Park Hannah Poisner Michael H Preuss Melissa A Richard Claudia Schurmann Veronica W Setiawan Alexandra Sockell Karan Vahi Marie Verbanck Abhishek Vishnu Ryan W Walker Kristin L Young Niha Zubair Victor Acuña-Alonso Jose Luis Ambite Kathleen C Barnes Eric Boerwinkle Erwin P Bottinger Carlos D Bustamante Christian Caberto Samuel Canizales-Quinteros Matthew P Conomos Ewa Deelman Ron Do Kimberly Doheny Lindsay Fernández-Rhodes Myriam Fornage Benyam Hailu Gerardo Heiss Brenna M Henn Lucia A Hindorff Rebecca D Jackson Cecelia A Laurie Cathy C Laurie Yuqing Li Dan-Yu Lin Andres Moreno-Estrada Girish Nadkarni Paul J Norman Loreall C Pooler Alexander P Reiner Jane Romm Chiara Sabatti Karla Sandoval Xin Sheng Eli A Stahl Daniel O Stram Timothy A Thornton Christina L Wassel Lynne R Wilkens Cheryl A Winkler Sachi Yoneyama Steven Buyske Christopher A Haiman Charles Kooperberg Loic Le Marchand Ruth J F Loos Tara C Matise Kari E North Ulrike Peters Eimear E Kenny Christopher S Carlson

Nature 2019 06 19;570(7762):514-518. Epub 2019 Jun 19.

Division of Public Health Science, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.

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June 2019

Latin Americans show wide-spread Converso ancestry and imprint of local Native ancestry on physical appearance.

Authors:

Juan-Camilo Chacón-Duque Kaustubh Adhikari Macarena Fuentes-Guajardo Javier Mendoza-Revilla Victor Acuña-Alonzo Rodrigo Barquera Mirsha Quinto-Sánchez Jorge Gómez-Valdés Paola Everardo Martínez Hugo Villamil-Ramírez Tábita Hünemeier Virginia Ramallo Caio C Silva de Cerqueira Malena Hurtado Valeria Villegas Vanessa Granja Mercedes Villena René Vásquez Elena Llop José R Sandoval Alberto A Salazar-Granara Maria-Laura Parolin Karla Sandoval Rosenda I Peñaloza-Espinosa Hector Rangel-Villalobos Cheryl A Winkler William Klitz Claudio Bravi Julio Molina Daniel Corach Ramiro Barrantes Verónica Gomes Carlos Resende Leonor Gusmão Antonio Amorim Yali Xue Jean-Michel Dugoujon Pedro Moral Rolando González-José Lavinia Schuler-Faccini Francisco M Salzano Maria-Cátira Bortolini Samuel Canizales-Quinteros Giovanni Poletti Carla Gallo Gabriel Bedoya Francisco Rothhammer David Balding Garrett Hellenthal Andrés Ruiz-Linares

Nat Commun 2018 12 19;9(1):5388. Epub 2018 Dec 19.

Ministry of Education Key Laboratory of Contemporary Anthropology and Collaborative Innovation Center of Genetics and Development, School of Life Sciences and Human Phenome Institute, Fudan University, Shanghai, 200433, China.

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December 2018

A genome-wide association and admixture mapping study of bronchodilator drug response in African Americans with asthma.

Pharmacogenomics J 2019 06 12;19(3):249-259. Epub 2018 Sep 12.

Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, USA.

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June 2019

An admixture mapping meta-analysis implicates genetic variation at 18q21 with asthma susceptibility in Latinos.

Authors:

Christopher R Gignoux Dara G Torgerson Maria Pino-Yanes Lawrence H Uricchio Joshua Galanter Lindsey A Roth Celeste Eng Donglei Hu Elizabeth A Nguyen Scott Huntsman Rasika A Mathias Rajesh Kumar Jose Rodriguez-Santana Neeta Thakur Sam S Oh Meghan McGarry Andres Moreno-Estrada Karla Sandoval Cheryl A Winkler Max A Seibold Badri Padhukasahasram David V Conti Harold J Farber Pedro Avila Emerita Brigino-Buenaventura Michael Lenoir Kelley Meade Denise Serebrisky Luisa N Borrell William Rodriguez-Cintron Shannon Thyne Bonnie R Joubert Isabelle Romieu Albert M Levin Juan-Jose Sienra-Monge Blanca Estela Del Rio-Navarro Weiniu Gan Benjamin A Raby Scott T Weiss Eugene Bleecker Deborah A Meyers Fernando J Martinez W James Gauderman Frank Gilliland Stephanie J London Carlos D Bustamante Dan L Nicolae Carole Ober Saunak Sen Kathleen Barnes L Keoki Williams Ryan D Hernandez Esteban G Burchard

J Allergy Clin Immunol 2019 03 7;143(3):957-969. Epub 2018 Sep 7.

Program in Pharmaceutical Sciences and Pharmacogenomics, University of California, San Francisco, San Francisco, Calif; Department of Bioengineering & Therapeutic Sciences, University of California, San Francisco, San Francisco, Calif; Department of Medicine, University of California, San Francisco, San Francisco, Calif.

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March 2019

Whole-Genome Sequencing of Pharmacogenetic Drug Response in Racially Diverse Children with Asthma.

Authors:

Angel C Y Mak Marquitta J White Walter L Eckalbar Zachary A Szpiech Sam S Oh Maria Pino-Yanes Donglei Hu Pagé Goddard Scott Huntsman Joshua Galanter Ann Chen Wu Blanca E Himes Soren Germer Julia M Vogel Karen L Bunting Celeste Eng Sandra Salazar Kevin L Keys Jennifer Liberto Thomas J Nuckton Thomas A Nguyen Dara G Torgerson Pui-Yan Kwok Albert M Levin Juan C Celedón Erick Forno Hakon Hakonarson Patrick M Sleiman Amber Dahlin Kelan G Tantisira Scott T Weiss Denise Serebrisky Emerita Brigino-Buenaventura Harold J Farber Kelley Meade Michael A Lenoir Pedro C Avila Saunak Sen Shannon M Thyne William Rodriguez-Cintron Cheryl A Winkler Andrés Moreno-Estrada Karla Sandoval Jose R Rodriguez-Santana Rajesh Kumar L Keoki Williams Nadav Ahituv Elad Ziv Max A Seibold Robert B Darnell Noah Zaitlen Ryan D Hernandez Esteban G Burchard

Am J Respir Crit Care Med 2018 06;197(12):1552-1564

1 Department of Medicine.

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June 2018

Demographic History of Indigenous Populations in Mesoamerica Based on mtDNA Sequence Data.

Authors:

Antonio González-Martín Amaya Gorostiza Lucía Regalado-Liu Sergio Arroyo-Peña Sergio Tirado Ismael Nuño-Arana Rodrigo Rubi-Castellanos Karla Sandoval Michael D Coble Héctor Rangel-Villalobos

PLoS One 2015 20;10(8):e0131791. Epub 2015 Aug 20.

Instituto de Investigación en Genética Molecular, Centro Universitario de la Ciénega, Universidad de Guadalajara, Ocotlán, Jalisco, Mexico.

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May 2016

Genome-wide association study and admixture mapping reveal new loci associated with total IgE levels in Latinos.

Authors:

Maria Pino-Yanes Christopher R Gignoux Joshua M Galanter Albert M Levin Catarina D Campbell Celeste Eng Scott Huntsman Katherine K Nishimura Pierre-Antoine Gourraud Kiana Mohajeri Brian J O'Roak Donglei Hu Rasika A Mathias Elizabeth A Nguyen Lindsey A Roth Badri Padhukasahasram Andres Moreno-Estrada Karla Sandoval Cheryl A Winkler Fred Lurmann Adam Davis Harold J Farber Kelley Meade Pedro C Avila Denise Serebrisky Rocio Chapela Jean G Ford Michael A Lenoir Shannon M Thyne Emerita Brigino-Buenaventura Luisa N Borrell William Rodriguez-Cintron Saunak Sen Rajesh Kumar Jose R Rodriguez-Santana Carlos D Bustamante Fernando D Martinez Benjamin A Raby Scott T Weiss Dan L Nicolae Carole Ober Deborah A Meyers Eugene R Bleecker Steven J Mack Ryan D Hernandez Evan E Eichler Kathleen C Barnes L Keoki Williams Dara G Torgerson Esteban G Burchard

J Allergy Clin Immunol 2015 Jun 6;135(6):1502-10. Epub 2014 Dec 6.

Department of Medicine, University of California, San Francisco, Calif; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, Calif.

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June 2015

Genetic ancestry influences asthma susceptibility and lung function among Latinos.

J Allergy Clin Immunol 2015 Jan 6;135(1):228-35. Epub 2014 Oct 6.

Department of Medicine, University of California, San Francisco (UCSF), San Francisco, Calif; Department of Bioengineering and Therapeutic Sciences, UCSF, San Francisco, Calif.

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January 2015

Human genetics. The genetics of Mexico recapitulates Native American substructure and affects biomedical traits.

Science 2014 Jun 12;344(6189):1280-5. Epub 2014 Jun 12.

Department of Genetics, Stanford University School of Medicine, Stanford, CA, USA.

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June 2014

Pulling out the 1%: whole-genome capture for the targeted enrichment of ancient DNA sequencing libraries.

Am J Hum Genet 2013 Nov 25;93(5):852-64. Epub 2013 Oct 25.

Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address:

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November 2013

Reconstructing Native American migrations from whole-genome and whole-exome data.

PLoS Genet 2013 26;9(12):e1004023. Epub 2013 Dec 26.

Department of Genetics, Stanford University, Stanford, California, United States of America.

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August 2014

Reconstructing the population genetic history of the Caribbean.

PLoS Genet 2013 Nov 14;9(11):e1003925. Epub 2013 Nov 14.

Department of Genetics, Stanford University School of Medicine, Stanford, California, United States of America.

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November 2013

A genome-wide association study of bronchodilator response in Latinos implicates rare variants.

J Allergy Clin Immunol 2014 Feb 29;133(2):370-8. Epub 2013 Aug 29.

Department of Medicine, University of California, San Francisco, Calif; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, Calif.

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February 2014

Factors associated with degree of atopy in Latino children in a nationwide pediatric sample: the Genes-environments and Admixture in Latino Asthmatics (GALA II) study.

J Allergy Clin Immunol 2013 Oct 16;132(4):896-905.e1. Epub 2013 May 16.

Division of Allergy and Immunology, Children's Memorial Hospital, and the Department of Pediatrics, Feinberg School of Medicine, Northwestern University, Chicago, Ill. Electronic address:

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October 2013