Publications by authors named "Karin J Metzner"

76Publications

V-pipe: a computational pipeline for assessing viral genetic diversity from high-throughput data.

Bioinformatics 2021 Jan 20. Epub 2021 Jan 20.

Department of Biosystems Science and Engineering, ETH Zurich, Basel, 4058, Switzerland.

View Article and Find Full Text PDF
January 2021

Long-term experimental evolution of HIV-1 reveals effects of environment and mutational history.

PLoS Biol 2020 12 28;18(12):e3001010. Epub 2020 Dec 28.

Department of Environmental Systems Sciences, Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland.

View Article and Find Full Text PDF
December 2020

HIV-1 promoter is gradually silenced when integrated into in Jurkat T-cells.

PeerJ 2020 24;8:e10321. Epub 2020 Nov 24.

Department of Infectious Diseases and Hospital Epidemiology, Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, Zurich, Switzerland.

View Article and Find Full Text PDF
November 2020

Prevalence of integrase strand transfer inhibitor resistance mutations in antiretroviral-naive HIV-1-infected individuals in Cameroon.

J Antimicrob Chemother 2021 Jan;76(1):124-129

Division of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, University of Zurich, Rämistrasse 100, 8091 Zurich, Switzerland.

View Article and Find Full Text PDF
January 2021

Impact of pretreatment low-abundance HIV-1 drug-resistant variants on virological failure among HIV-1/TB-co-infected individuals.

J Antimicrob Chemother 2020 Nov;75(11):3319-3326

KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), College of Health Sciences, University of KwaZulu-Natal, Doris Duke Medical Research Institute, Durban, South Africa.

View Article and Find Full Text PDF
November 2020

Reversal of T Cell Exhaustion in Chronic HCV Infection.

Viruses 2020 07 25;12(8). Epub 2020 Jul 25.

Department of Immunopathology of Infectious and Parasitic Diseases, Medical University of Warsaw, 02-091 Warsaw, Poland.

View Article and Find Full Text PDF
July 2020

Parallel evolution of HIV-1 in a long-term experiment.

Mol Biol Evol 2019 Jun 28. Epub 2019 Jun 28.

Department of Environmental Systems Sciences, ETH Zurich, Zurich.

View Article and Find Full Text PDF
June 2019