Publications by authors named "Justin Newberg"

31Publications

Genomic Profiling of Prostate Cancers from Men with African and European Ancestry.

Clin Cancer Res 2020 Sep 10;26(17):4651-4660. Epub 2020 Jul 10.

Division of Hematology/Oncology, Department of Medicine; Helen Diller Family Comprehensive Cancer Center; Bakar Computational Health Sciences Institute; Institute for Human Genetics; San Francisco Veterans Affairs Medical Center; University of California, San Francisco, San Francisco, California.

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September 2020

Noninvasive Assessment of Epidermal Genomic Markers of UV Exposure in Skin.

J Invest Dermatol 2021 Jan 15;141(1):124-131.e2. Epub 2020 Jun 15.

Department of Tumor Biology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida, USA; Donald A. Adam Melanoma & Skin Cancer Center of Excellence, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida, USA; Department of Anatomic Pathology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida, USA. Electronic address:

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January 2021

Comprehensive Analysis of Genetic Ancestry and Its Molecular Correlates in Cancer.

Cancer Cell 2020 05;37(5):639-654.e6

The Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Harvard Medical School, Boston, MA 02115, USA; Department of Medicine, Brigham and Women's Hospital, Boston, MA 02115, USA; Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA. Electronic address:

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May 2020

SBCDDB: Sleeping Beauty Cancer Driver Database for gene discovery in mouse models of human cancers.

Nucleic Acids Res 2018 01;46(D1):D1011-D1017

Cancer Research Program, Houston Methodist Research Institute, Houston, Texas, USA.

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January 2018

Transposon mutagenesis identifies genetic drivers of Braf(V600E) melanoma.

Nat Genet 2015 May 13;47(5):486-95. Epub 2015 Apr 13.

1] Cancer Research Program, Houston Methodist Research Institute, Houston, Texas, USA. [2] Institute of Molecular and Cell Biology, Singapore.

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May 2015

Automated analysis of immunohistochemistry images identifies candidate location biomarkers for cancers.

Proc Natl Acad Sci U S A 2014 Dec 8;111(51):18249-54. Epub 2014 Dec 8.

Lane Center for Computational Biology, Center for Bioimage Informatics, Department of Biomedical Engineering, Department of Biological Sciences, and Machine Learning Department, Carnegie Mellon University, Pittsburgh, PA 15213

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December 2014

Genomic and genetic variation in E2F transcription factor-1 in men with nonobstructive azoospermia.

Fertil Steril 2015 Jan 24;103(1):44-52.e1. Epub 2014 Oct 24.

Center for Reproductive Medicine, Baylor College of Medicine, Houston, Texas; Scott Department of Urology, Baylor College of Medicine, Houston, Texas; Department of Molecular and Cell Biology, Baylor College of Medicine, Houston, Texas.

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January 2015

Coactivators enable glucocorticoid receptor recruitment to fine-tune estrogen receptor transcriptional responses.

Nucleic Acids Res 2013 Apr 26;41(7):4036-48. Epub 2013 Feb 26.

Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX 77030, USA.

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April 2013

Automated analysis and reannotation of subcellular locations in confocal images from the Human Protein Atlas.

PLoS One 2012 30;7(11):e50514. Epub 2012 Nov 30.

Center for Bioimage Informatics and Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.

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May 2013

High throughput method to quantify anterior-posterior polarity of T-cells and epithelial cells.

Viruses 2011 12 28;3(12):2396-411. Epub 2011 Nov 28.

Department of Molecular Virology and Microbiology, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.

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December 2011

A framework for image-based classification of mitotic cells in asynchronous populations.

Assay Drug Dev Technol 2012 Apr 15;10(2):161-78. Epub 2011 Nov 15.

Molecular and Cellular Biology Department, Baylor College of Medicine, Houston, Texas 77030, USA.

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April 2012

Automated microscopy and image analysis for androgen receptor function.

Methods Mol Biol 2011 ;776:313-31

Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX 77030, USA.

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November 2011

Location proteomics: systematic determination of protein subcellular location.

Methods Mol Biol 2009 ;500:313-32

Department of Biomedical Engineering and Center for Bioimage Informatics, Carnegie Mellon University, Pittsburg, PA, USA.

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May 2009

Detection of protein-protein interactions through vesicle targeting.

Genetics 2009 May 23;182(1):33-9. Epub 2009 Mar 23.

Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA.

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May 2009

Automated Analysis of Human Protein Atlas Immunofluorescence Images.

Proc IEEE Int Symp Biomed Imaging 2009 ;5193229:1023-1026

Center for Bioimage Informatics and Dept. of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA, USA.

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January 2009

A framework for the automated analysis of subcellular patterns in human protein atlas images.

J Proteome Res 2008 Jun 25;7(6):2300-8. Epub 2008 Apr 25.

Center for Bioimage Informatics, and Departments of Biological Sciences, Biomedical Engineering, and Machine Learning, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, Pennsylvania 15217, USA.

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June 2008

AUTOMATED COMPARISON OF PROTEIN SUBCELLULAR LOCATION PATTERNS BETWEEN IMAGES OF NORMAL AND CANCEROUS TISSUES.

Proc IEEE Int Symp Biomed Imaging 2008 ;4540993:304-307

Center for Bioimage Informatics, Carnegie Mellon University, Pittsburgh, PA.

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January 2008