Publications by authors named "Joseph Pickrell"

49Publications

Detecting Polygenic Adaptation in Admixture Graphs.

Genetics 2018 04 18;208(4):1565-1584. Epub 2018 Jan 18.

New York Genome Center, New York, New York 10013.

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http://dx.doi.org/10.1534/genetics.117.300489DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5887149PMC
April 2018

The population genetics of human disease: The case of recessive, lethal mutations.

PLoS Genet 2017 Sep 28;13(9):e1006915. Epub 2017 Sep 28.

Department of Biological Sciences, Columbia University, New York, NY, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1006915DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5619689PMC
September 2017

Identifying genetic variants that affect viability in large cohorts.

PLoS Biol 2017 Sep 5;15(9):e2002458. Epub 2017 Sep 5.

Department of Biological Sciences, Columbia University, New York, New York, United States of America.

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http://dx.doi.org/10.1371/journal.pbio.2002458DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5584811PMC
September 2017

Contrasting Determinants of Mutation Rates in Germline and Soma.

Genetics 2017 09 21;207(1):255-267. Epub 2017 Jul 21.

Department of Biological Sciences, Columbia University, New York, New York 10025.

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http://dx.doi.org/10.1534/genetics.117.1114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5586376PMC
September 2017

Case-control association mapping by proxy using family history of disease.

Nat Genet 2017 Mar 16;49(3):325-331. Epub 2017 Jan 16.

New York Genome Center, New York, New York, USA.

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http://dx.doi.org/10.1038/ng.3766DOI Listing
March 2017

Corrigendum: Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses.

Authors:
Aysu Okbay Bart M L Baselmans Jan-Emmanuel De Neve Patrick Turley Michel G Nivard Mark Alan Fontana S Fleur W Meddens Richard Karlsson Linnér Cornelius A Rietveld Jaime Derringer Jacob Gratten James J Lee Jimmy Z Liu Ronald de Vlaming Tarunveer S Ahluwalia Jadwiga Buchwald Alana Cavadino Alexis C Frazier-Wood Nicholas A Furlotte Victoria Garfield Marie Henrike Geisel Juan R Gonzalez Saskia Haitjema Robert Karlsson Sander W van der Laan Karl-Heinz Ladwig Jari Lahti Sven J van der Lee Penelope A Lind Tian Liu Lindsay Matteson Evelin Mihailov Michael B Miller Camelia C Minica Ilja M Nolte Dennis Mook-Kanamori Peter J van der Most Christopher Oldmeadow Yong Qian Olli Raitakari Rajesh Rawal Anu Realo Rico Rueedi Börge Schmidt Albert V Smith Evie Stergiakouli Toshiko Tanaka Kent Taylor Gudmar Thorleifsson Juho Wedenoja Juergen Wellmann Harm-Jan Westra Sara M Willems Wei Zhao Najaf Amin Andrew Bakshi Sven Bergmann Gyda Bjornsdottir Patricia A Boyle Samantha Cherney Simon R Cox Gail Davies Oliver S P Davis Jun Ding Nese Direk Peter Eibich Rebecca T Emeny Ghazaleh Fatemifar Jessica D Faul Luigi Ferrucci Andreas J Forstner Christian Gieger Richa Gupta Tamara B Harris Juliette M Harris Elizabeth G Holliday Jouke-Jan Hottenga Philip L De Jager Marika A Kaakinen Eero Kajantie Ville Karhunen Ivana Kolcic Meena Kumari Lenore J Launer Lude Franke Ruifang Li-Gao David C Liewald Marisa Koini Anu Loukola Pedro Marques-Vidal Grant W Montgomery Miriam A Mosing Lavinia Paternoster Alison Pattie Katja E Petrovic Laura Pulkki-Råback Lydia Quaye Katri Räikkönen Igor Rudan Rodney J Scott Jennifer A Smith Angelina R Sutin Maciej Trzaskowski Anna E Vinkhuyzen Lei Yu Delilah Zabaneh John R Attia David A Bennett Klaus Berger Lars Bertram Dorret I Boomsma Harold Snieder Shun-Chiao Chang Francesco Cucca Ian J Deary Cornelia M van Duijn Johan G Eriksson Ute Bültmann Eco J C de Geus Patrick J F Groenen Vilmundur Gudnason Torben Hansen Catharine A Hartman Claire M A Haworth Caroline Hayward Andrew C Heath David A Hinds Elina Hyppönen William G William Marjo-Riitta Järvelin Karl-Heinz Jöckel Jaakko Kaprio Sharon L R Kardia Liisa Keltikangas-Järvinen Peter Kraft Laura D Kubzansky Terho Lehtimäki Patrik K E Magnusson Nicholas G Martin Matt McGue Andres Metspalu Melinda Mills Renée de Mutsert Albertine J Oldehinkel Gerard Pasterkamp Nancy L Pedersen Robert Plomin Ozren Polasek Christine Power Stephen S Rich Frits R Rosendaal Hester M den Ruijter David Schlessinger Helena Schmidt Rauli Svento Reinhold Schmidt Behrooz Z Alizadeh Thorkild I A Sørensen Tim D Spector John M Starr Kari Stefansson Andrew Steptoe Antonio Terracciano Unnur Thorsteinsdottir A Roy Thurik Nicholas J Timpson Henning Tiemeier André G Uitterlinden Peter Vollenweider Gert G Wagner David R Weir Jian Yang Dalton C Conley George Davey Smith Albert Hofman Magnus Johannesson David I Laibson Sarah E Medland Michelle N Meyer Joseph K Pickrell Tõnu Esko Robert F Krueger Jonathan P Beauchamp Philipp D Koellinger Daniel J Benjamin Meike Bartels David Cesarini

Nat Genet 2016 11;48(12):1591

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http://dx.doi.org/10.1038/ng1216-1587bDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5509058PMC
November 2016

Corrigendum: Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses.

Authors:
Aysu Okbay Bart M L Baselmans Jan-Emmanuel De Neve Patrick Turley Michel G Nivard Mark Alan Fontana S Fleur W Meddens Richard Karlsson Linnér Cornelius A Rietveld Jaime Derringer Jacob Gratten James J Lee Jimmy Z Liu Ronald de Vlaming Tarunveer S Ahluwalia Jadwiga Buchwald Alana Cavadino Alexis C Frazier-Wood Nicholas A Furlotte Victoria Garfield Marie Henrike Geisel Juan R Gonzalez Saskia Haitjema Robert Karlsson Sander W van der Laan Karl-Heinz Ladwig Jari Lahti Sven J van der Lee Penelope A Lind Tian Liu Lindsay Matteson Evelin Mihailov Michael B Miller Camelia C Minica Ilja M Nolte Dennis Mook-Kanamori Peter J van der Most Christopher Oldmeadow Yong Qian Olli Raitakari Rajesh Rawal Anu Realo Rico Rueedi Börge Schmidt Albert V Smith Evie Stergiakouli Toshiko Tanaka Kent Taylor Gudmar Thorleifsson Juho Wedenoja Juergen Wellmann Harm-Jan Westra Sara M Willems Wei Zhao Najaf Amin Andrew Bakshi Sven Bergmann Gyda Bjornsdottir Patricia A Boyle Samantha Cherney Simon R Cox Gail Davies Oliver S P Davis Jun Ding Nese Direk Peter Eibich Rebecca T Emeny Ghazaleh Fatemifar Jessica D Faul Luigi Ferrucci Andreas J Forstner Christian Gieger Richa Gupta Tamara B Harris Juliette M Harris Elizabeth G Holliday Jouke-Jan Hottenga Philip L De Jager Marika A Kaakinen Eero Kajantie Ville Karhunen Ivana Kolcic Meena Kumari Lenore J Launer Lude Franke Ruifang Li-Gao David C Liewald Marisa Koini Anu Loukola Pedro Marques-Vidal Grant W Montgomery Miriam A Mosing Lavinia Paternoster Alison Pattie Katja E Petrovic Laura Pulkki-Råback Lydia Quaye Katri Räikkönen Igor Rudan Rodney J Scott Jennifer A Smith Angelina R Sutin Maciej Trzaskowski Anna E Vinkhuyzen Lei Yu Delilah Zabaneh John R Attia David A Bennett Klaus Berger Lars Bertram Dorret I Boomsma Harold Snieder Shun-Chiao Chang Francesco Cucca Ian J Deary Cornelia M van Duijn Johan G Eriksson Ute Bültmann Eco J C de Geus Patrick J F Groenen Vilmundur Gudnason Torben Hansen Catharine A Hartman Claire M A Haworth Caroline Hayward Andrew C Heath David A Hinds Elina Hyppönen William G Iacono Marjo-Riitta Järvelin Karl-Heinz Jöckel Jaakko Kaprio Sharon L R Kardia Liisa Keltikangas-Järvinen Peter Kraft Laura D Kubzansky Terho Lehtimäki Patrik K E Magnusson Nicholas G Martin Matt McGue Andres Metspalu Melinda Mills Renée de Mutsert Albertine J Oldehinkel Gerard Pasterkamp Nancy L Pedersen Robert Plomin Ozren Polasek Christine Power Stephen S Rich Frits R Rosendaal Hester M den Ruijter David Schlessinger Helena Schmidt Rauli Svento Reinhold Schmidt Behrooz Z Alizadeh Thorkild I A Sørensen Tim D Spector John M Starr Kari Stefansson Andrew Steptoe Antonio Terracciano Unnur Thorsteinsdottir A Roy Thurik Nicholas J Timpson Henning Tiemeier André G Uitterlinden Peter Vollenweider Gert G Wagner David R Weir Jian Yang Dalton C Conley George Davey Smith Albert Hofman Magnus Johannesson David I Laibson Sarah E Medland Michelle N Meyer Joseph K Pickrell Tõnu Esko Robert F Krueger Jonathan P Beauchamp Philipp D Koellinger Daniel J Benjamin Meike Bartels David Cesarini

Nat Genet 2016 07;48(8):970

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http://dx.doi.org/10.1038/ng0816-970cDOI Listing
July 2016

Genome-wide association study identifies 74 loci associated with educational attainment.

Authors:
Aysu Okbay Jonathan P Beauchamp Mark Alan Fontana James J Lee Tune H Pers Cornelius A Rietveld Patrick Turley Guo-Bo Chen Valur Emilsson S Fleur W Meddens Sven Oskarsson Joseph K Pickrell Kevin Thom Pascal Timshel Ronald de Vlaming Abdel Abdellaoui Tarunveer S Ahluwalia Jonas Bacelis Clemens Baumbach Gyda Bjornsdottir Johannes H Brandsma Maria Pina Concas Jaime Derringer Nicholas A Furlotte Tessel E Galesloot Giorgia Girotto Richa Gupta Leanne M Hall Sarah E Harris Edith Hofer Momoko Horikoshi Jennifer E Huffman Kadri Kaasik Ioanna P Kalafati Robert Karlsson Augustine Kong Jari Lahti Sven J van der Lee Christiaan deLeeuw Penelope A Lind Karl-Oskar Lindgren Tian Liu Massimo Mangino Jonathan Marten Evelin Mihailov Michael B Miller Peter J van der Most Christopher Oldmeadow Antony Payton Natalia Pervjakova Wouter J Peyrot Yong Qian Olli Raitakari Rico Rueedi Erika Salvi Börge Schmidt Katharina E Schraut Jianxin Shi Albert V Smith Raymond A Poot Beate St Pourcain Alexander Teumer Gudmar Thorleifsson Niek Verweij Dragana Vuckovic Juergen Wellmann Harm-Jan Westra Jingyun Yang Wei Zhao Zhihong Zhu Behrooz Z Alizadeh Najaf Amin Andrew Bakshi Sebastian E Baumeister Ginevra Biino Klaus Bønnelykke Patricia A Boyle Harry Campbell Francesco P Cappuccio Gail Davies Jan-Emmanuel De Neve Panos Deloukas Ilja Demuth Jun Ding Peter Eibich Lewin Eisele Niina Eklund David M Evans Jessica D Faul Mary F Feitosa Andreas J Forstner Ilaria Gandin Bjarni Gunnarsson Bjarni V Halldórsson Tamara B Harris Andrew C Heath Lynne J Hocking Elizabeth G Holliday Georg Homuth Michael A Horan Jouke-Jan Hottenga Philip L de Jager Peter K Joshi Astanand Jugessur Marika A Kaakinen Mika Kähönen Stavroula Kanoni Liisa Keltigangas-Järvinen Lambertus A L M Kiemeney Ivana Kolcic Seppo Koskinen Aldi T Kraja Martin Kroh Zoltan Kutalik Antti Latvala Lenore J Launer Maël P Lebreton Douglas F Levinson Paul Lichtenstein Peter Lichtner David C M Liewald Anu Loukola Pamela A Madden Reedik Mägi Tomi Mäki-Opas Riccardo E Marioni Pedro Marques-Vidal Gerardus A Meddens George McMahon Christa Meisinger Thomas Meitinger Yusplitri Milaneschi Lili Milani Grant W Montgomery Ronny Myhre Christopher P Nelson Dale R Nyholt William E R Ollier Aarno Palotie Lavinia Paternoster Nancy L Pedersen Katja E Petrovic David J Porteous Katri Räikkönen Susan M Ring Antonietta Robino Olga Rostapshova Igor Rudan Aldo Rustichini Veikko Salomaa Alan R Sanders Antti-Pekka Sarin Helena Schmidt Rodney J Scott Blair H Smith Jennifer A Smith Jan A Staessen Elisabeth Steinhagen-Thiessen Konstantin Strauch Antonio Terracciano Martin D Tobin Sheila Ulivi Simona Vaccargiu Lydia Quaye Frank J A van Rooij Cristina Venturini Anna A E Vinkhuyzen Uwe Völker Henry Völzke Judith M Vonk Diego Vozzi Johannes Waage Erin B Ware Gonneke Willemsen John R Attia David A Bennett Klaus Berger Lars Bertram Hans Bisgaard Dorret I Boomsma Ingrid B Borecki Ute Bültmann Christopher F Chabris Francesco Cucca Daniele Cusi Ian J Deary George V Dedoussis Cornelia M van Duijn Johan G Eriksson Barbara Franke Lude Franke Paolo Gasparini Pablo V Gejman Christian Gieger Hans-Jörgen Grabe Jacob Gratten Patrick J F Groenen Vilmundur Gudnason Pim van der Harst Caroline Hayward David A Hinds Wolfgang Hoffmann Elina Hyppönen William G Iacono Bo Jacobsson Marjo-Riitta Järvelin Karl-Heinz Jöckel Jaakko Kaprio Sharon L R Kardia Terho Lehtimäki Steven F Lehrer Patrik K E Magnusson Nicholas G Martin Matt McGue Andres Metspalu Neil Pendleton Brenda W J H Penninx Markus Perola Nicola Pirastu Mario Pirastu Ozren Polasek Danielle Posthuma Christine Power Michael A Province Nilesh J Samani David Schlessinger Reinhold Schmidt Thorkild I A Sørensen Tim D Spector Kari Stefansson Unnur Thorsteinsdottir A Roy Thurik Nicholas J Timpson Henning Tiemeier Joyce Y Tung André G Uitterlinden Veronique Vitart Peter Vollenweider David R Weir James F Wilson Alan F Wright Dalton C Conley Robert F Krueger George Davey Smith Albert Hofman David I Laibson Sarah E Medland Michelle N Meyer Jian Yang Magnus Johannesson Peter M Visscher Tõnu Esko Philipp D Koellinger David Cesarini Daniel J Benjamin

Nature 2016 05 11;533(7604):539-42. Epub 2016 May 11.

Center for Economic and Social Research, University of Southern California, Los Angeles, California 90089-3332, USA.

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http://dx.doi.org/10.1038/nature17671DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4883595PMC
May 2016

Detection and interpretation of shared genetic influences on 42 human traits.

Nat Genet 2016 07 16;48(7):709-17. Epub 2016 May 16.

23andMe, Inc., Mountain View, California, USA.

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http://dx.doi.org/10.1038/ng.3570DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5207801PMC
July 2016

Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses.

Authors:
Aysu Okbay Bart M L Baselmans Jan-Emmanuel De Neve Patrick Turley Michel G Nivard Mark Alan Fontana S Fleur W Meddens Richard Karlsson Linnér Cornelius A Rietveld Jaime Derringer Jacob Gratten James J Lee Jimmy Z Liu Ronald de Vlaming Tarunveer S Ahluwalia Jadwiga Buchwald Alana Cavadino Alexis C Frazier-Wood Nicholas A Furlotte Victoria Garfield Marie Henrike Geisel Juan R Gonzalez Saskia Haitjema Robert Karlsson Sander W van der Laan Karl-Heinz Ladwig Jari Lahti Sven J van der Lee Penelope A Lind Tian Liu Lindsay Matteson Evelin Mihailov Michael B Miller Camelia C Minica Ilja M Nolte Dennis Mook-Kanamori Peter J van der Most Christopher Oldmeadow Yong Qian Olli Raitakari Rajesh Rawal Anu Realo Rico Rueedi Börge Schmidt Albert V Smith Evie Stergiakouli Toshiko Tanaka Kent Taylor Gudmar Thorleifsson Juho Wedenoja Juergen Wellmann Harm-Jan Westra Sara M Willems Wei Zhao Najaf Amin Andrew Bakshi Sven Bergmann Gyda Bjornsdottir Patricia A Boyle Samantha Cherney Simon R Cox Gail Davies Oliver S P Davis Jun Ding Nese Direk Peter Eibich Rebecca T Emeny Ghazaleh Fatemifar Jessica D Faul Luigi Ferrucci Andreas J Forstner Christian Gieger Richa Gupta Tamara B Harris Juliette M Harris Elizabeth G Holliday Jouke-Jan Hottenga Philip L De Jager Marika A Kaakinen Eero Kajantie Ville Karhunen Ivana Kolcic Meena Kumari Lenore J Launer Lude Franke Ruifang Li-Gao David C Liewald Marisa Koini Anu Loukola Pedro Marques-Vidal Grant W Montgomery Miriam A Mosing Lavinia Paternoster Alison Pattie Katja E Petrovic Laura Pulkki-Råback Lydia Quaye Katri Räikkönen Igor Rudan Rodney J Scott Jennifer A Smith Angelina R Sutin Maciej Trzaskowski Anna E Vinkhuyzen Lei Yu Delilah Zabaneh John R Attia David A Bennett Klaus Berger Lars Bertram Dorret I Boomsma Harold Snieder Shun-Chiao Chang Francesco Cucca Ian J Deary Cornelia M van Duijn Johan G Eriksson Ute Bültmann Eco J C de Geus Patrick J F Groenen Vilmundur Gudnason Torben Hansen Catharine A Hartman Claire M A Haworth Caroline Hayward Andrew C Heath David A Hinds Elina Hyppönen William G Iacono Marjo-Riitta Järvelin Karl-Heinz Jöckel Jaakko Kaprio Sharon L R Kardia Liisa Keltikangas-Järvinen Peter Kraft Laura D Kubzansky Terho Lehtimäki Patrik K E Magnusson Nicholas G Martin Matt McGue Andres Metspalu Melinda Mills Renée de Mutsert Albertine J Oldehinkel Gerard Pasterkamp Nancy L Pedersen Robert Plomin Ozren Polasek Christine Power Stephen S Rich Frits R Rosendaal Hester M den Ruijter David Schlessinger Helena Schmidt Rauli Svento Reinhold Schmidt Behrooz Z Alizadeh Thorkild I A Sørensen Tim D Spector John M Starr Kari Stefansson Andrew Steptoe Antonio Terracciano Unnur Thorsteinsdottir A Roy Thurik Nicholas J Timpson Henning Tiemeier André G Uitterlinden Peter Vollenweider Gert G Wagner David R Weir Jian Yang Dalton C Conley George Davey Smith Albert Hofman Magnus Johannesson David I Laibson Sarah E Medland Michelle N Meyer Joseph K Pickrell Tõnu Esko Robert F Krueger Jonathan P Beauchamp Philipp D Koellinger Daniel J Benjamin Meike Bartels David Cesarini

Nat Genet 2016 06 18;48(6):624-33. Epub 2016 Apr 18.

Department of Economics, New York University, New York, New York, USA.

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http://dx.doi.org/10.1038/ng.3552DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4884152PMC
June 2016

Approximately independent linkage disequilibrium blocks in human populations.

Bioinformatics 2016 Jan 22;32(2):283-5. Epub 2015 Sep 22.

New York Genome Center, New York, NY 10013, USA and Department of Biological Sciences, Columbia University, New York, NY 10027, USA.

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http://dx.doi.org/10.1093/bioinformatics/btv546DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4731402PMC
January 2016

Toward a new history and geography of human genes informed by ancient DNA.

Trends Genet 2014 Sep 26;30(9):377-89. Epub 2014 Aug 26.

Department of Genetics, Harvard Medical School, Boston, MA, USA; Howard Hughes Medical Institute, Harvard Medical School, Boston, MA, USA; Broad Institute of the Massachusetts Institute of Technology (MIT) and Harvard, Cambridge, MA, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S01689525140012
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http://dx.doi.org/10.1016/j.tig.2014.07.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4163019PMC
September 2014

Natural selection for the Duffy-null allele in the recently admixed people of Madagascar.

Proc Biol Sci 2014 Aug;281(1789):20140930

Department of Anthropology, The Pennsylvania State University, University Park, PA 16802, USA Department of Biology, The Pennsylvania State University, University Park, PA 16802, USA

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http://dx.doi.org/10.1098/rspb.2014.0930DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4100512PMC
August 2014

Fast and accurate imputation of summary statistics enhances evidence of functional enrichment.

Bioinformatics 2014 Oct 1;30(20):2906-14. Epub 2014 Jul 1.

Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, 90024, Bioinformatics Interdepartmental Program, University of California Los Angeles, Los Angeles, 90024, Department of Medicine, Lung Biology Center, University of California San Francisco, San Francisco, 94143, Program in Genetic Epidemiology and Statistical Genetics, Harvard School of Public Health, Boston, 02115, Departments of Epidemiology and Biostatistics, Harvard School of Public Health, Boston, MA, 02115, Program in Medical and Population Genetics, Broad Institute, Cambridge, MA, 02142, Department of Genetics Harvard Medical School, Boston, MA, 02115 and Division of Population Health Sciences and Education, St George's, University of London, UK Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, 90024, Bioinformatics Interdepartmental Program, University of California Los Angeles, Los Angeles, 90024, Department of Medicine, Lung Biology Center, University of California San Francisco, San Francisco, 94143, Program in Genetic Epidemiology and Statistical Genetics, Harvard School of Public Health, Boston, 02115, Departments of Epidemiology and Biostatistics, Harvard School of Public Health, Boston, MA, 02115, Program in Medical and Population Genetics, Broad Institute, Cambridge, MA, 02142, Department of Genetics Harvard Medical School, Boston, MA, 02115 and Division of Population Health Sciences and Education, St George's, University of London, UK Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, 90024, Bioinformatics Interdepartmental Program, University of California Los Angeles, Los Angeles, 90024, Department of Medicine, Lung Biology Center, University of California San Francisco, San Francisco, 94143, Program in Genetic Epidemiology and Statistical Genetics, Har

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http://dx.doi.org/10.1093/bioinformatics/btu416DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184260PMC
October 2014

Joint analysis of functional genomic data and genome-wide association studies of 18 human traits.

Am J Hum Genet 2014 Apr;94(4):559-73

New York Genome Center, New York, NY 10013, USA; Department of Biological Sciences, Columbia University, New York, NY 10027, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2014.03.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3980523PMC
April 2014

Ancient west Eurasian ancestry in southern and eastern Africa.

Proc Natl Acad Sci U S A 2014 Feb 3;111(7):2632-7. Epub 2014 Feb 3.

Department of Genetics and Howard Hughes Medical Institute, Harvard Medical School, Boston, MA 02115.

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http://dx.doi.org/10.1073/pnas.1313787111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3932865PMC
February 2014

Inferring admixture histories of human populations using linkage disequilibrium.

Genetics 2013 Apr 14;193(4):1233-54. Epub 2013 Feb 14.

Department of Mathematics and Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

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http://dx.doi.org/10.1534/genetics.112.147330DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3606100PMC
April 2013

Inference of population splits and mixtures from genome-wide allele frequency data.

PLoS Genet 2012 15;8(11):e1002967. Epub 2012 Nov 15.

Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America.

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https://dx.plos.org/10.1371/journal.pgen.1002967
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http://dx.doi.org/10.1371/journal.pgen.1002967DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3499260PMC
May 2013

Comment on "Widespread RNA and DNA sequence differences in the human transcriptome".

Science 2012 Mar;335(6074):1302; author reply 1302

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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http://www.sciencemag.org/cgi/doi/10.1126/science.1210484
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http://dx.doi.org/10.1126/science.1210484DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5207799PMC
March 2012

False positive peaks in ChIP-seq and other sequencing-based functional assays caused by unannotated high copy number regions.

Bioinformatics 2011 Aug 19;27(15):2144-6. Epub 2011 Jun 19.

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1093/bioinformatics/btr354DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3137225PMC
August 2011

Noisy splicing drives mRNA isoform diversity in human cells.

PLoS Genet 2010 Dec 9;6(12):e1001236. Epub 2010 Dec 9.

Department of Human Genetics, The University of Chicago, Chicago, Illinois, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1001236DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3000347PMC
December 2010

The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation.

Curr Biol 2010 Feb;20(4):R208-15

Department of Human Genetics, The University of Chicago, Room 507, 929 E. 58th St, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1016/j.cub.2009.11.055DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2994553PMC
February 2010

A rod cell marker of nocturnal ancestry.

J Hum Evol 2010 Feb 25;58(2):207-10. Epub 2009 Nov 25.

Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1016/j.jhevol.2009.09.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2813975PMC
February 2010

Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data.

Bioinformatics 2009 Dec 6;25(24):3207-12. Epub 2009 Oct 6.

Department of Human Genetics, University of Chicago, 920 E. 58th St., CLSC 507, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1093/bioinformatics/btp579DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2788925PMC
December 2009

A mixture model approach to multiple testing for the genetic analysis of gene expression.

BMC Proc 2007 18;1 Suppl 1:S141. Epub 2007 Dec 18.

JE 2492 Universite Paris-Sud, Hôpital Paul Brousse - Batiment 15/16, 16 Avenue Paul Vaillant Couturier, Villejuif CEDEX 94807, France.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2367480PMC
http://dx.doi.org/10.1186/1753-6561-1-s1-s141DOI Listing
December 2009

Identification of a novel "chromosome scaffold" protein that associates with Tec elements undergoing en masse elimination in Euplotes crassus.

Mol Biol Cell 2003 Feb;14(2):571-84

Department of Cell and Molecular Biology, Northwestern University, Feinberg School of Medicine, Chicago, Illinois 60611-3008, USA.

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http://dx.doi.org/10.1091/mbc.e02-08-0542DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC149993PMC
February 2003