Joseph M Reinhardt

Joseph M Reinhardt

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Joseph M Reinhardt

Joseph M Reinhardt

Publications by authors named "Joseph M Reinhardt"

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A Novel Method for Automatic Identification of Breathing State.

Sci Rep 2019 Jan 14;9(1):103. Epub 2019 Jan 14.

Department of Biomedical Engineering, University of Iowa, Iowa City, IA, 52246, United States.

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http://dx.doi.org/10.1038/s41598-018-36454-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6331627PMC
January 2019

Quantifying ventilation change due to radiation therapy using 4DCT Jacobian calculations.

Med Phys 2018 Oct 31;45(10):4483-4492. Epub 2018 Aug 31.

Department of Human Oncology, University of Wisconsin - Madison, Madison, WI, 53792, USA.

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http://dx.doi.org/10.1002/mp.13105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6220845PMC
October 2018

Signs of Gas Trapping in Normal Lung Density Regions in Smokers.

Am J Respir Crit Care Med 2017 12;196(11):1404-1410

1 Division of Pulmonary, Allergy and Critical Care Medicine.

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http://dx.doi.org/10.1164/rccm.201705-0855OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5736979PMC
December 2017

CT-derived Biomechanical Metrics Improve Agreement Between Spirometry and Emphysema.

Acad Radiol 2016 10 4;23(10):1255-63. Epub 2016 Apr 4.

Department of Radiology and Biomedical Engineering, University of Iowa, Iowa City, Iowa 52242.

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http://dx.doi.org/10.1016/j.acra.2016.02.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5026854PMC
October 2016

Computed Tomography Image Matching in Chronic Obstructive Pulmonary Disease.

Crit Rev Biomed Eng 2016 ;44(6):411-425

Department of Biomedical Engineering, University of Iowa, Iowa City, IA 52242.

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http://dx.doi.org/10.1615/CritRevBiomedEng.2017021299DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6056001PMC
January 2016

Automated method for identification and artery-venous classification of vessel trees in retinal vessel networks.

PLoS One 2014 12;9(2):e88061. Epub 2014 Feb 12.

Department of Biomedical Engineering, University of Iowa, Iowa City, Iowa, United States of America ; Department of Electrical and Computer Engineering, University of Iowa, Iowa City, Iowa, United States of America ; Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City, Iowa, United States of America ; The Iowa City Veteran's Medical Center, Iowa City, Iowa, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0088061PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3922768PMC
January 2015

Development of a preliminary pediatric tracheal growth model from magnetic resonance images.

Laryngoscope 2014 Aug 17;124(8):1947-51. Epub 2014 Jan 17.

Department of Otolaryngology-Head and Neck Surgery, University of Iowa, Iowa City, Iowa, U.S.A.

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http://dx.doi.org/10.1002/lary.24547DOI Listing
August 2014

Quantification of confocal images of biofilms grown on irregular surfaces.

J Microbiol Methods 2014 May 13;100:111-20. Epub 2014 Mar 13.

The University of Iowa, Department of Pharmaceutical Sciences and Experimental Therapeutics, S215 PHAR, 115 S. Grand Ave, Iowa City, IA 52242, United States; The University of Iowa, Department of Chemical and Biochemical Engineering, Iowa City, IA 52242, United States. Electronic address:

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http://dx.doi.org/10.1016/j.mimet.2014.02.020DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4041150PMC
May 2014

A measure for characterizing sliding on lung boundaries.

Ann Biomed Eng 2014 Mar 11;42(3):642-50. Epub 2013 Oct 11.

Department of Biomedical Engineering, University of Iowa, 1136 Seamans Center, Iowa City, IA, 52242, USA.

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http://dx.doi.org/10.1007/s10439-013-0920-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3943475PMC
March 2014

Respiratory effort correction strategies to improve the reproducibility of lung expansion measurements.

Med Phys 2013 Dec;40(12):123504

Department of Biomedical Engineering, The University of Iowa, Iowa City, Iowa 52242.

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http://dx.doi.org/10.1118/1.4829519DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3843762PMC
December 2013

Reproducibility of intensity-based estimates of lung ventilation.

Med Phys 2013 Jun;40(6):063504

Department of Biomedical Engineering, The University of Iowa, Iowa City, Iowa 52242, USA.

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http://dx.doi.org/10.1118/1.4805106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3676396PMC
June 2013

Splat feature classification with application to retinal hemorrhage detection in fundus images.

IEEE Trans Med Imaging 2013 Feb 15;32(2):364-75. Epub 2012 Nov 15.

Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City, IA 52242, USA.

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http://ieeexplore.ieee.org/iel5/42/4359023/06352921.pdf?arnu
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http://ieeexplore.ieee.org/lpdocs/epic03/wrapper.htm?arnumbe
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http://dx.doi.org/10.1109/TMI.2012.2227119DOI Listing
February 2013

Improving Intensity-Based Lung CT Registration Accuracy Utilizing Vascular Information.

Int J Biomed Imaging 2012 28;2012:285136. Epub 2012 Nov 28.

Biomedical Image Analysis Lab, GE Global Research Center, Niskayuna, NY 12309, USA.

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http://dx.doi.org/10.1155/2012/285136DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3515912PMC
December 2012

Flexible models for planning repair of complex tracheal anomalies.

Laryngoscope 2012 Dec;122 Suppl 4:S77

Department of Otolaryngology-Head and Neck Surgery, University of Iowa, Iowa City, Iowa, USA.

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http://dx.doi.org/10.1002/lary.23802DOI Listing
December 2012

Automated detection of malarial retinopathy-associated retinal hemorrhages.

Invest Ophthalmol Vis Sci 2012 Sep 25;53(10):6582-8. Epub 2012 Sep 25.

Department of Biomedical Engineering, University of Iowa, Iowa City, IA, USA.

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http://dx.doi.org/10.1167/iovs.12-10191DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3460387PMC
September 2012

Enhanced analysis of bacteria susceptibility in connected biofilms.

J Microbiol Methods 2012 Jul 19;90(1):9-14. Epub 2012 Apr 19.

The University of Iowa, College of Pharmacy, Department of Pharmaceutical Sciences and Experimental Therapeutics, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1016/j.mimet.2012.04.008DOI Listing
July 2012

Reproducibility of registration-based measures of lung tissue expansion.

Med Phys 2012 Mar;39(3):1595-608

Department of Biomedical Engineering, The University of Iowa, Iowa City, IA, USA.

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http://dx.doi.org/10.1118/1.3685589DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3306443PMC
March 2012

Three-dimensional characterization of regional lung deformation.

J Biomech 2011 Sep 28;44(13):2489-95. Epub 2011 Jul 28.

Department of Biomedical Engineering, University of Iowa, IA 52242, United States.

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http://dx.doi.org/10.1016/j.jbiomech.2011.06.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3443473PMC
September 2011

Vessel boundary delineation on fundus images using graph-based approach.

IEEE Trans Med Imaging 2011 Jun 6;30(6):1184-91. Epub 2011 Jan 6.

Department of Biomedical Engineering, University of Iowa, Iowa City, IA 52242, USA.

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http://ieeexplore.ieee.org/document/5680652/
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http://dx.doi.org/10.1109/TMI.2010.2103566DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3137950PMC
June 2011

A cubic B-spline-based hybrid registration of lung CT images for a dynamic airway geometric model with large deformation.

Phys Med Biol 2011 Jan 9;56(1):203-18. Epub 2010 Dec 9.

Department of Mechanical and Industrial Engineering, University of Iowa, Iowa City, IA 52242, USA.

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http://stacks.iop.org/0031-9155/56/i=1/a=013?key=crossref.a8
Publisher Site
http://dx.doi.org/10.1088/0031-9155/56/1/013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3115562PMC
January 2011

Computer-assisted assessment of hyoid bone motion from videofluoroscopic swallow studies.

Dysphagia 2010 Dec 24;25(4):298-306. Epub 2009 Oct 24.

Department of Biomedical Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1007/s00455-009-9261-9DOI Listing
December 2010

Automated quantification of inherited phenotypes from color images: a twin study of the variability of optic nerve head shape.

Invest Ophthalmol Vis Sci 2010 Nov 26;51(11):5870-7. Epub 2010 May 26.

Department of Ophthalmology and Visual Sciences, University of Iowa Hospitals and Clinics, Iowa City, Iowa 52242, USA.

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http://iovs.arvojournals.org/article.aspx?doi=10.1167/iovs.1
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http://dx.doi.org/10.1167/iovs.10-5527DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3061515PMC
November 2010

Objective and expert-independent validation of retinal image registration algorithms by a projective imaging distortion model.

Med Image Anal 2010 Aug 28;14(4):539-49. Epub 2010 Apr 28.

Department of Ophthalmology and Visual Sciences, University of Iowa Hospital and Clinics, United States.

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http://linkinghub.elsevier.com/retrieve/pii/S136184151000037
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http://dx.doi.org/10.1016/j.media.2010.04.001DOI Listing
August 2010

Evaluation of lobar biomechanics during respiration using image registration.

Med Image Comput Comput Assist Interv 2009 ;12(Pt 1):739-46

Department of Biomedical Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2913717PMC
June 2010

4DCT-based measurement of changes in pulmonary function following a course of radiation therapy.

Med Phys 2010 Mar;37(3):1261-72

Department of Biomedical Engineering, The University of Iowa, Iowa City, Iowa 52242, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2842288PMC
http://dx.doi.org/10.1118/1.3312210DOI Listing
March 2010

An airway phantom to standardize CT acquisition in multicenter clinical trials.

Acad Radiol 2009 Sep 24;16(9):1134-41. Epub 2009 May 24.

Center of Excellence for Pulmonary Biology, Division of Pediatric Pulmonary, Stanford University Medical Center, 770 Welch Road, Suite 350, Palo Alto, CA 94305-5715, USA.

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http://dx.doi.org/10.1016/j.acra.2009.02.018DOI Listing
September 2009

Anatomy-guided lung lobe segmentation in X-ray CT images.

IEEE Trans Med Imaging 2009 Feb;28(2):202-14

Department of Biomedical Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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http://ieeexplore.ieee.org/document/4591391/
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http://dx.doi.org/10.1109/TMI.2008.929101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5489231PMC
February 2009

Engineering patient-specific drill templates and bioabsorbable posterior cervical plates: a feasibility study.

J Neurosurg Spine 2009 Feb;10(2):129-32

Department of Nuerosurgery, University of Iowa Carver College of Medicine, Iowa City, Iowa 52242, USA.

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https://thejns.org/view/journals/j-neurosurg-spine/10/2/arti
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http://dx.doi.org/10.3171/2008.11.SPI0817677DOI Listing
February 2009

Image-based drill templates for cervical pedicle screw placement.

J Neurosurg Spine 2009 Jan;10(1):21-6

Carver College of Medicine, University of Iowa, Iowa City, Iowa, USA.

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https://thejns.org/view/journals/j-neurosurg-spine/10/1/arti
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http://dx.doi.org/10.3171/2008.9.SPI08229DOI Listing
January 2009

Registration-based estimates of local lung tissue expansion compared to xenon CT measures of specific ventilation.

Med Image Anal 2008 Dec 12;12(6):752-63. Epub 2008 Apr 12.

Department of Biomedical Engineering, University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1016/j.media.2008.03.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2692217PMC
December 2008

Integrated CT/bronchoscopy in the central airways: preliminary results.

Acad Radiol 2008 Jun;15(6):786-98

Harvard Medical School and Wellman Center for Photomedicine, Massachusetts General Hospital, Boston, MA, USA.

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http://dx.doi.org/10.1016/j.acra.2008.03.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2701729PMC
June 2008

Validation of retinal image registration algorithms by a projective imaging distortion model.

Conf Proc IEEE Eng Med Biol Soc 2007 ;2007:6472-5

Department of Biomedical Engineering, The University of Iowa, Iowa City 52242, USA.

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http://dx.doi.org/10.1109/IEMBS.2007.4353841DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2739576PMC
April 2008

CT-measured regional specific volume change reflects regional ventilation in supine sheep.

J Appl Physiol (1985) 2008 Apr 7;104(4):1177-84. Epub 2008 Feb 7.

Department of Anesthesiology, Johns Hopkins Hospital, Baltimore, MD 21287, USA.

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http://www.physiology.org/doi/10.1152/japplphysiol.00212.200
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http://dx.doi.org/10.1152/japplphysiol.00212.2007DOI Listing
April 2008

Rapid prototype patient-specific drill template for cervical pedicle screw placement.

Comput Aided Surg 2007 Sep;12(5):303-8

Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, IA 52242, USA

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http://dx.doi.org/10.3109/10929080701662826DOI Listing
September 2007

Registration-derived estimates of local lung expansion as surrogates for regional ventilation.

Inf Process Med Imaging 2007 ;20:763-74

Department of Biomedical Engineering, The University of Iowa, Iowa City, IA 52242, USA.

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August 2007

Breast MRI lesion classification: improved performance of human readers with a backpropagation neural network computer-aided diagnosis (CAD) system.

J Magn Reson Imaging 2007 Jan;25(1):89-95

Department of Biomedical Engineering, The University of Iowa, Iowa City, Iowa 52242, USA.

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http://dx.doi.org/10.1002/jmri.20794DOI Listing
January 2007

Macro-optical color assessment of the pulmonary airways with subsequent three-dimensional multidetector-x-ray-computed-tomography assisted display.

J Biomed Opt 2005 Sep-Oct;10(5):051703

University of Iowa Hospitals and Clinics, Department of Internal Medicine, Iowa City, Iowa 52242, USA.

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http://dx.doi.org/10.1117/1.2112767DOI Listing
April 2006

Computed tomography studies of lung mechanics.

Proc Am Thorac Soc 2005 ;2(6):517-21, 506-7

Department of Anesthesiology, Tower 711, Johns Hopkins Hospital, 600 North Wolfe Street, Baltimore, MD 21287-8711, USA.

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http://dx.doi.org/10.1513/pats.200507-076DSDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2713339PMC
April 2006

Atlas-driven lung lobe segmentation in volumetric X-ray CT images.

IEEE Trans Med Imaging 2006 Jan;25(1):1-16

University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1109/TMI.2005.859209DOI Listing
January 2006

Smoothing lung segmentation surfaces in three-dimensional X-ray CT images using anatomic guidance.

Acad Radiol 2005 Dec;12(12):1502-11

Department of Biomedical Engineering, University of Iowa, Iowa City, IA 52242, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S107663320500641
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http://dx.doi.org/10.1016/j.acra.2005.08.008DOI Listing
December 2005

The comprehensive imaging-based analysis of the lung: a forum for team science.

Acad Radiol 2004 Dec;11(12):1370-80

Department of Radiology, University of Iowa, 200 Hawkins Dr, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1016/j.acra.2004.09.005DOI Listing
December 2004

Maximizing quantitative accuracy of lung airway lumen and wall measures obtained from X-ray CT imaging.

J Appl Physiol (1985) 2003 Sep 16;95(3):1063-75. Epub 2003 May 16.

Department of Biomedical Engineering, University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1152/japplphysiol.00962.2002DOI Listing
September 2003

Segmentation and analysis of the human airway tree from three-dimensional X-ray CT images.

IEEE Trans Med Imaging 2003 Aug;22(8):940-50

Department of Biomedical Engineering, University of Iowa, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1109/TMI.2003.815905DOI Listing
August 2003

Establishing a normative atlas of the human lung: intersubject warping and registration of volumetric CT images.

Acad Radiol 2003 Mar;10(3):255-65

Department of Biomedical Engineering, University of Iowa, 1402 SC, Iowa City, IA 52242, USA.

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March 2003

Three-dimensional human airway segmentation methods for clinical virtual bronchoscopy.

Acad Radiol 2002 Oct;9(10):1153-68

Department of Computer Science and Engineering, Penn State University, PA, USA.

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October 2002