Publications by authors named "Joseph M Foster"

16Publications

From Peptidome to PRIDE: public proteomics data migration at a large scale.

Proteomics 2013 May 20;13(10-11):1692-5. Epub 2013 Apr 20.

EMBL Outstation, European Bioinformatics Institute (EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1002/pmic.201200514DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3717177PMC
May 2013

Chromatographic retention time prediction for posttranslationally modified peptides.

Proteomics 2012 Apr;12(8):1151-9

Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Solna, Sweden.

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http://dx.doi.org/10.1002/pmic.201100386DOI Listing
April 2012

PRIDE: quality control in a proteomics data repository.

Database (Oxford) 2012 20;2012:bas004. Epub 2012 Mar 20.

EMBL Outstation, European Bioinformatics Institute (EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.

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http://dx.doi.org/10.1093/database/bas004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3308160PMC
June 2012

A posteriori quality control for the curation and reuse of public proteomics data.

Proteomics 2011 Jun 2;11(11):2182-94. Epub 2011 May 2.

EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1002/pmic.201000602DOI Listing
June 2011

Bioinformatics challenges in the proteomic analysis of human plasma.

Methods Mol Biol 2011 ;728:333-47

EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://link.springer.com/10.1007/978-1-61779-068-3_22
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http://dx.doi.org/10.1007/978-1-61779-068-3_22DOI Listing
July 2011

Proteomics data repositories: providing a safe haven for your data and acting as a springboard for further research.

J Proteomics 2010 Oct 6;73(11):2136-46. Epub 2010 Jul 6.

EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1016/j.jprot.2010.06.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2958306PMC
October 2010

The Proteomics Identifications database: 2010 update.

Nucleic Acids Res 2010 Jan 11;38(Database issue):D736-42. Epub 2009 Nov 11.

EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1093/nar/gkp964DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2808904PMC
January 2010