Joseph F Petrosino

Joseph F Petrosino

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Joseph F Petrosino

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Early nasal microbiota and acute respiratory infections during the first years of life.

Thorax 2019 Jun 10;74(6):592-599. Epub 2019 May 10.

Department of Paediatrics and Adolescent Medicine, Turku University Hospital and University of Turku, Turku, Finland.

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http://thorax.bmj.com/lookup/doi/10.1136/thoraxjnl-2018-2126
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http://dx.doi.org/10.1136/thoraxjnl-2018-212629DOI Listing
June 2019

Exploration of the Vaginal and Gut Microbiome in African American Women by Body Mass Index, Class of Obesity, and Gestational Weight Gain: A Pilot Study.

Am J Perinatol 2019 Jun 26. Epub 2019 Jun 26.

The Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Texas Medical Center, Houston, Texas.

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http://dx.doi.org/10.1055/s-0039-1692715DOI Listing
June 2019

Leveraging Human Microbiome Features to Diagnose and Stratify Children with Irritable Bowel Syndrome.

J Mol Diagn 2019 May 17;21(3):449-461. Epub 2019 Apr 17.

Department of Pathology and Immunology, Baylor College of Medicine, Houston, Texas; Texas Children's Microbiome Center, Texas Children's Hospital, Houston, Texas; Department of Pathology, Texas Children's Hospital, Houston, Texas; Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas. Electronic address:

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http://dx.doi.org/10.1016/j.jmoldx.2019.01.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6504675PMC
May 2019

Investigating Colonization of the Healthy Adult Gastrointestinal Tract by Fungi.

mSphere 2018 Mar-Apr;3(2). Epub 2018 Mar 28.

Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA.

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http://dx.doi.org/10.1128/mSphere.00092-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5874442PMC
March 2019

Circulating 25-hydroxyvitamin D, nasopharyngeal microbiota, and bronchiolitis severity.

Pediatr Allergy Immunol 2018 12 13;29(8):877-880. Epub 2018 Nov 13.

Department of Emergency Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.

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http://dx.doi.org/10.1111/pai.12977DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6294653PMC
December 2018

Insular resting state functional connectivity is associated with gut microbiota diversity.

Eur J Neurosci 2018 Dec 16. Epub 2018 Dec 16.

Menninger Department of Psychiatry and Behavioral Sciences, Baylor College of Medicine, One Baylor Plaza, A277, Houston, TX, 77030, USA.

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http://dx.doi.org/10.1111/ejn.14305DOI Listing
December 2018

Maximal viral information recovery from sequence data using VirMAP.

Nat Commun 2018 08 10;9(1):3205. Epub 2018 Aug 10.

Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, TX, 77030, USA.

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http://dx.doi.org/10.1038/s41467-018-05658-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6086868PMC
August 2018

Correction: Effects of tobacco smoke and electronic cigarette vapor exposure on the oral and gut microbiota in humans: a pilot study.

PeerJ 2018 23;6. Epub 2018 Aug 23.

Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.

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http://dx.doi.org/10.7717/peerj.4693/correction-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6106372PMC
August 2018

Oral microbiota reveals signs of acculturation in Mexican American women.

PLoS One 2018 25;13(4):e0194100. Epub 2018 Apr 25.

Department of Epidemiology, Division of Cancer Prevention and Population Sciences, The University of Texas MD Anderson Cancer Center, Houston, Texas, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0194100PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5918619PMC
July 2018

Impact of Age-Related Mitochondrial Dysfunction and Exercise on Intestinal Microbiota Composition.

J Gerontol A Biol Sci Med Sci 2018 04;73(5):571-578

Wellcome Trust Centre for Mitochondrial Research, Institute for Cell and Molecular Biosciences and Institute of Neuroscience, Medical School, Newcastle University, Newcastle upon Tyne.

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http://dx.doi.org/10.1093/gerona/glx197DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5905657PMC
April 2018

Effects of tobacco smoke and electronic cigarette vapor exposure on the oral and gut microbiota in humans: a pilot study.

PeerJ 2018 30;6:e4693. Epub 2018 Apr 30.

Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.

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http://dx.doi.org/10.7717/peerj.4693DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5933315PMC
April 2018

The microbiome in precision medicine: the way forward.

Genome Med 2018 02 22;10(1):12. Epub 2018 Feb 22.

Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, 77030, USA.

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http://dx.doi.org/10.1186/s13073-018-0525-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824491PMC
February 2018

Nasal Airway Microbiota Profile and Severe Bronchiolitis in Infants: A Case-control Study.

Pediatr Infect Dis J 2017 Nov;36(11):1044-1051

From the *Department of Emergency Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts; †Department of Pediatrics, Emory University School of Medicine, Atlanta, Georgia; ‡Department of Medicine, Boston Children's Hospital, Boston, Massachusetts; §Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas; ¶Department of Molecular Virology and Microbiology, and Pediatrics, Baylor College of Medicine, Houston, Texas; ‖Department of Pediatrics, University of Louisville, Louisville, Kentucky; and **Alfred I. duPont Hospital for Children, Wilmington, Delaware.

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http://dx.doi.org/10.1097/INF.0000000000001500DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5479744PMC
November 2017

Association of Maternal Gestational Weight Gain With the Infant Fecal Microbiota.

J Pediatr Gastroenterol Nutr 2017 11;65(5):509-515

*Division of General Academic Pediatrics, Department of Pediatrics †Department of Gastroenterology and Nutrition, MassGeneral Hospital for Children, Boston, MA ‡Department of Molecular Virology and Microbiology, Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, TX §Department of Emergency Medicine, Massachusetts General Hospital ||Department of Nutrition, Harvard T.H. Chan School of Public Health, Boston, MA.

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http://dx.doi.org/10.1097/MPG.0000000000001566DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5589469PMC
November 2017

The gut mycobiome of the Human Microbiome Project healthy cohort.

Microbiome 2017 Nov 25;5(1):153. Epub 2017 Nov 25.

Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.

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http://dx.doi.org/10.1186/s40168-017-0373-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5702186PMC
November 2017

Associations of Nasopharyngeal Metabolome and Microbiome with Severity among Infants with Bronchiolitis. A Multiomic Analysis.

Am J Respir Crit Care Med 2017 10;196(7):882-891

3 Department of Emergency Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts.

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http://dx.doi.org/10.1164/rccm.201701-0071OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5649976PMC
October 2017

Development of the cutaneous microbiome in the preterm infant: A prospective longitudinal study.

PLoS One 2017 27;12(4):e0176669. Epub 2017 Apr 27.

Alkek Center for Metagenomics and Microbiome Research and Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0176669PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5407830PMC
September 2017

Sphingolipid metabolism potential in fecal microbiome and bronchiolitis in infants: a case-control study.

BMC Res Notes 2017 Jul 26;10(1):325. Epub 2017 Jul 26.

Department of Emergency Medicine, Massachusetts General Hospital, Harvard Medical School, 125 Nashua Street, Suite 920, Boston, MA, 02114-1101, USA.

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http://dx.doi.org/10.1186/s13104-017-2659-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5530560PMC
July 2017

Complete Genome Sequence of ATCC 43942.

Genome Announc 2017 Jul 27;5(30). Epub 2017 Jul 27.

Environmental Health Sciences, University of South Carolina, Columbia, South Carolina, USA

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http://dx.doi.org/10.1128/genomeA.00733-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5532843PMC
July 2017

Single Delivery of High-Diversity Fecal Microbiota Preparation by Colonoscopy Is Safe and Effective in Increasing Microbial Diversity in Active Ulcerative Colitis.

Inflamm Bowel Dis 2017 06;23(6):903-911

*Jill Roberts Center for IBD, Weill Cornell Medicine, New York, New York; †Division of Gastroenterology and Hepatology, Weill Cornell Medicine, New York, New York; ‡Jill Roberts Institute for Research in IBD, Weill Cornell Medicine, New York, New York; §Department of Medicine, NYU School of Medicine, New York, New York; ‖Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas; ¶Finch Therapeutics, Somerville, Massachusetts; and **OpenBiome, Medford, Massachusetts.

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http://dx.doi.org/10.1097/MIB.0000000000001132DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6159890PMC
June 2017

Microbiome disruption and recovery in the fish following exposure to broad-spectrum antibiotic.

Infect Drug Resist 2017 9;10:143-154. Epub 2017 May 9.

Department of Biological Sciences, Sam Houston State University, Huntsville.

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http://dx.doi.org/10.2147/IDR.S129055DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5431701PMC
May 2017

Household siblings and nasal and fecal microbiota in infants.

Pediatr Int 2017 Apr 22;59(4):473-481. Epub 2016 Dec 22.

Department of Emergency Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1111/ped.13168DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5354996PMC
April 2017

Serum cathelicidin, nasopharyngeal microbiota, and disease severity among infants hospitalized with bronchiolitis.

J Allergy Clin Immunol 2017 04 12;139(4):1383-1386.e6. Epub 2016 Nov 12.

Department of Emergency Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, Mass.

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http://dx.doi.org/10.1016/j.jaci.2016.09.037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5385272PMC
April 2017

Alterations in the gut microbiota can elicit hypertension in rats.

Physiol Genomics 2017 02 23;49(2):96-104. Epub 2016 Dec 23.

Department of Anesthesiology, Baylor College of Medicine, Houston, Texas;

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http://dx.doi.org/10.1152/physiolgenomics.00081.2016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5336599PMC
February 2017

Gut microbiota as a source of a surrogate antigen that triggers autoimmunity in an immune privileged site.

Gut Microbes 2017 01 3;8(1):59-66. Epub 2017 Jan 3.

a Laboratory of Immunology , National Eye Institute, National Institutes of Health , Bethesda , Maryland , USA.

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http://dx.doi.org/10.1080/19490976.2016.1273996DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5361604PMC
January 2017

Conjunctival Microbiome Changes Associated With Soft Contact Lens and Orthokeratology Lens Wearing.

Invest Ophthalmol Vis Sci 2017 01;58(1):128-136

School of Optometry and Ophthalmology and Eye Hospital, Wenzhou Medical University, Wenzhou, Zhejiang, China 4State Key Laboratory Cultivation Base and Key Laboratory of Vision Science, Ministry of Health P. R. China and Zhejiang Provincial Key Laboratory of Ophthalmology and Optometry, Wenzhou, Zhejiang, China.

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http://dx.doi.org/10.1167/iovs.16-20231DOI Listing
January 2017

Water management impacts rice methylmercury and the soil microbiome.

Sci Total Environ 2016 Dec 20;572:608-617. Epub 2016 Jul 20.

Department of Biological Sciences, University of South Carolina, Columbia, SC, USA. Electronic address:

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http://dx.doi.org/10.1016/j.scitotenv.2016.07.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5099098PMC
December 2016

Promise and Pragmatism in Clinical Microbiome Research.

Mini Rev Med Chem 2015 ;16(3):222-4

Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA.

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September 2016

Gut Microbiome Associates With Lifetime Cardiovascular Disease Risk Profile Among Bogalusa Heart Study Participants.

Circ Res 2016 Sep 9;119(8):956-64. Epub 2016 Aug 9.

From the Department of Epidemiology, School of Public Health and Tropical Medicine (T.N.K., L.A.B., H.H., J.Z., J.H.) and Department of Medicine, School of Medicine (L.A.B., J.H.), Tulane University, New Orleans, LA; The Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, TX (N.J.A., J.F.P.); and Department of Pediatrics & Medicine, University of Mississippi Medical Center, Jackson, MS (A.C.).

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5045790PMC
http://dx.doi.org/10.1161/CIRCRESAHA.116.309219DOI Listing
September 2016

Respiratory syncytial virus and rhinovirus severe bronchiolitis are associated with distinct nasopharyngeal microbiota.

J Allergy Clin Immunol 2016 06 6;137(6):1909-1913.e4. Epub 2016 Apr 6.

Department of Emergency Medicine, Massachusetts General Hospital, Boston, Mass; Division of Rheumatology, Allergy and Immunology, Department of Medicine, Massachusetts General Hospital, Boston, Mass.

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http://dx.doi.org/10.1016/j.jaci.2016.01.036DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4899255PMC
June 2016

Microbial Reconstitution Reverses Maternal Diet-Induced Social and Synaptic Deficits in Offspring.

Cell 2016 Jun;165(7):1762-1775

Department of Neuroscience, Baylor College of Medicine, Houston, TX 77030, USA; Memory and Brain Research Center, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2016.06.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5102250PMC
June 2016

Microbial-Derived Metabolites Reflect an Altered Intestinal Microbiota during Catch-Up Growth in Undernourished Neonatal Mice.

J Nutr 2016 05 6;146(5):940-8. Epub 2016 Apr 6.

Department of Molecular Virology and Microbiology and Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, TX.

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http://dx.doi.org/10.3945/jn.115.229179DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4841929PMC
May 2016

Complete Genome Sequence of Streptococcus mitis Strain SVGS_061 Isolated from a Neutropenic Patient with Viridans Group Streptococcal Shock Syndrome.

Genome Announc 2016 Apr 7;4(2). Epub 2016 Apr 7.

Department of Infectious Diseases, Infection Control and Employee Health, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA Department of Genomic Medicine, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA

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http://dx.doi.org/10.1128/genomeA.00259-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824267PMC
April 2016

Microbiome-Epigenome Interactions and the Environmental Origins of Inflammatory Bowel Diseases.

J Pediatr Gastroenterol Nutr 2016 Feb;62(2):208-19

*Alkek Center for Metagenomics and Microbiome Research †Program in Translational Biology and Molecular Medicine ‡Department of Molecular Virology and Microbiology §Section of Pediatric Gastroenterology, Department of Pediatrics, Baylor College of Medicine, Texas Children's Hospital, USDA/ARS Children's Nutrition Research Center, Houston, TX.

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http://dx.doi.org/10.1097/MPG.0000000000000950DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4724338PMC
February 2016

The role of gut microbiota in fetal methylmercury exposure: Insights from a pilot study.

Toxicol Lett 2016 Feb 25;242:60-67. Epub 2015 Nov 25.

Environmental Sciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, P.O. Box 2008, MS-6038 Oak Ridge, TN, USA. Electronic address:

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http://dx.doi.org/10.1016/j.toxlet.2015.11.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4707065PMC
February 2016

Role of the Gut Microbiome in Obstructive Sleep Apnea-Induced Hypertension.

Hypertension 2016 Feb 28;67(2):469-74. Epub 2015 Dec 28.

From the Departments of Anesthesiology (D.J.D., S.C.P., R.M.B.), Pathology and Immunology (B.P.G., J.L.C., E.B.H.), Molecular Physiology and Biophysics (R.M.B.), The Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology (N.J.A., J.F.P.), and Texas Children's Microbiome Center, Department of Pathology, Baylor College of Medicine, Houston (J.L.C., E.B.H.); and Department of Medicine, Texas Children's Hospital, Houston (J.L.C., E.B.H.).

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http://dx.doi.org/10.1161/HYPERTENSIONAHA.115.06672DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4713369PMC
February 2016

Microbial community assembly and metabolic function during mammalian corpse decomposition.

Science 2016 Jan 10;351(6269):158-62. Epub 2015 Dec 10.

Department of Pediatrics, University of California, San Diego, San Diego, CA 92037, USA. Department of Computer Science and Engineering, University of California, San Diego, San Diego, CA 92037, USA.

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http://dx.doi.org/10.1126/science.aad2646DOI Listing
January 2016

Metagenomic analysis of nitrate-reducing bacteria in the oral cavity: implications for nitric oxide homeostasis.

PLoS One 2014 26;9(3):e88645. Epub 2014 Mar 26.

Texas Therapeutics Institute, Brown Foundation Institute of Molecular Medicine, The University of Texas Health Science Center Houston, Houston, Texas, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0088645PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3966736PMC
December 2015

The host effects of Gambusia affinis with an antibiotic-disrupted microbiome.

Comp Biochem Physiol C Toxicol Pharmacol 2015 Dec 18;178:163-168. Epub 2015 Oct 18.

Department of Biological Sciences, Sam Houston State University, Huntsville, TX, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cbpc.2015.10.004DOI Listing
December 2015

Composition and function of the undernourished neonatal mouse intestinal microbiome.

J Nutr Biochem 2015 Oct 15;26(10):1050-7. Epub 2015 May 15.

Department of Molecular Virology & Microbiology, Baylor College of Medicine, Houston, TX 77030, USA; Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, TX 77030, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S09552863150010
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http://dx.doi.org/10.1016/j.jnutbio.2015.04.010DOI Listing
October 2015

MHC variation sculpts individualized microbial communities that control susceptibility to enteric infection.

Nat Commun 2015 Oct 23;6:8642. Epub 2015 Oct 23.

Department of Pathology, Division of Microbiology and Immunology, University of Utah School of Medicine, Salt Lake City, Utah 84112, USA.

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http://dx.doi.org/10.1038/ncomms9642DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4621775PMC
October 2015

Decreased microbiota diversity associated with urinary tract infection in a trial of bacterial interference.

J Infect 2015 Sep 3;71(3):358-367. Epub 2015 Jun 3.

Section of Infectious Diseases, Departments of Medicine and Surgery, Baylor College of Medicine, One Baylor Plaza, Houston, TX, 77030, USA.

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http://dx.doi.org/10.1016/j.jinf.2015.05.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4529357PMC
September 2015

Murine model of chemotherapy-induced extraintestinal pathogenic Escherichia coli translocation.

Infect Immun 2015 Aug 1;83(8):3243-56. Epub 2015 Jun 1.

Molecular Virology and Microbiology Department, Baylor College of Medicine, Houston, Texas, USA

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http://dx.doi.org/10.1128/IAI.00684-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4496622PMC
August 2015

Transmissible microbial and metabolomic remodeling by soluble dietary fiber improves metabolic homeostasis.

Sci Rep 2015 Jun 4;5:10604. Epub 2015 Jun 4.

Department of Biochemistry and Molecular Biology, The University of Texas Health Science Center at Houston, 6431 Fannin St., Houston, TX 77030.

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http://dx.doi.org/10.1038/srep10604DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4455235PMC
June 2015

Initial insights into bacterial succession during human decomposition.

Int J Legal Med 2015 May 28;129(3):661-71. Epub 2014 Nov 28.

Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, TX, USA.

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http://dx.doi.org/10.1007/s00414-014-1128-4DOI Listing
May 2015

Oligofructose protects against arsenic-induced liver injury in a model of environment/obesity interaction.

Toxicol Appl Pharmacol 2015 May 8;284(3):304-14. Epub 2015 Mar 8.

Department of Pharmacology and Toxicology, University of Louisville Health Sciences Center, Louisville, KY 40292, USA. Electronic address:

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http://dx.doi.org/10.1016/j.taap.2015.02.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4515777PMC
May 2015

16S gut community of the Cameron County Hispanic Cohort.

Microbiome 2015 6;3. Epub 2015 Mar 6.

Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine, Houston, TX USA ; Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX USA ; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX USA.

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http://dx.doi.org/10.1186/s40168-015-0072-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4355967PMC
March 2015

Characterization of the rat oral microbiome and the effects of dietary nitrate.

Free Radic Biol Med 2014 Dec 12;77:249-57. Epub 2014 Oct 12.

Texas Therapeutics Institute, Brown Foundation Institute of Molecular Medicine, The University of Texas Health Science Center Houston, Houston, TX 77030, USA. Electronic address:

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http://dx.doi.org/10.1016/j.freeradbiomed.2014.09.017DOI Listing
December 2014

The living dead: bacterial community structure of a cadaver at the onset and end of the bloat stage of decomposition.

PLoS One 2013 30;8(10):e77733. Epub 2013 Oct 30.

Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0077733PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3813760PMC
August 2014

The dynamics of a family's gut microbiota reveal variations on a theme.

Microbiome 2014 21;2:25. Epub 2014 Jul 21.

Department of Microbiology and Immunology, University of Michigan, 1520A Medical Science Research Building I, 1150 W. Medical Center Drive, Ann Arbor, MI 48109, USA.

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http://dx.doi.org/10.1186/2049-2618-2-25DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4109379PMC
July 2014

Nasopharyngeal Proteobacteria are associated with viral etiology and acute wheezing in children with severe bronchiolitis.

J Allergy Clin Immunol 2014 Apr 22;133(4):1220-2. Epub 2013 Dec 22.

Department of Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Mass. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00916749130171
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http://dx.doi.org/10.1016/j.jaci.2013.10.049DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3972371PMC
April 2014

Mathematical modeling of primary succession of murine intestinal microbiota.

Proc Natl Acad Sci U S A 2014 Jan 23;111(1):439-44. Epub 2013 Dec 23.

Department of Microbiology and Immunology and Department of Internal Medicine, University of Michigan, Ann Arbor, MI 48109.

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http://www.pnas.org/cgi/doi/10.1073/pnas.1311322111
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http://dx.doi.org/10.1073/pnas.1311322111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3890833PMC
January 2014

Fecal microbiota imbalance in Mexican children with type 1 diabetes.

Sci Rep 2014 Jan 22;4:3814. Epub 2014 Jan 22.

Department of Nutrition and Metabolism, Centro de Investigación en Alimentación y Desarrollo, A.C., Hermosillo, Sonora, México.

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http://www.nature.com/articles/srep03814
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3898044PMC
January 2014

The gut microbiome modulates colon tumorigenesis.

MBio 2013 Nov 5;4(6):e00692-13. Epub 2013 Nov 5.

Department of Microbiology and Immunology, University of Michigan, Ann Arbor, Michigan, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3892781PMC
November 2013

Murine norovirus infection does not cause major disruptions in the murine intestinal microbiota.

Microbiome 2013 Feb 18;1(1). Epub 2013 Feb 18.

Department of Microbiology and Immunology, University of Michigan Medical School, 5622 Medical Sciences Bldg, II, 1150 West Medical Center Drive, 48109-5620, Ann Arbor, USA.

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February 2013