Jose Lugo-Martinez

Jose Lugo-Martinez

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Jose Lugo-Martinez

Jose Lugo-Martinez

Publications by authors named "Jose Lugo-Martinez"

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4Publications

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Dynamic interaction network inference from longitudinal microbiome data.

Microbiome 2019 04 2;7(1):54. Epub 2019 Apr 2.

Computational Biology Department, School of Computer Science, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, 15213, Pennsylvania, USA.

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http://dx.doi.org/10.1186/s40168-019-0660-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6446388PMC
April 2019

The Loss and Gain of Functional Amino Acid Residues Is a Common Mechanism Causing Human Inherited Disease.

PLoS Comput Biol 2016 08 26;12(8):e1005091. Epub 2016 Aug 26.

Department of Computer Science and Informatics, Indiana University, Bloomington, Indiana, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.1005091DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001644PMC
August 2016

Extensive error in the number of genes inferred from draft genome assemblies.

PLoS Comput Biol 2014 Dec 4;10(12):e1003998. Epub 2014 Dec 4.

School of Informatics and Computing, Indiana University, Bloomington, Indiana; Department of Biology, Indiana University, Bloomington, Indiana.

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http://dx.doi.org/10.1371/journal.pcbi.1003998DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4256071PMC
December 2014

Estimating gene gain and loss rates in the presence of error in genome assembly and annotation using CAFE 3.

Mol Biol Evol 2013 Aug 24;30(8):1987-97. Epub 2013 May 24.

National Evolutionary Synthesis Center, Durham, North Carolina, USA.

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http://dx.doi.org/10.1093/molbev/mst100DOI Listing
August 2013