Jordi Garcia-Ojalvo

Jordi Garcia-Ojalvo

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Jordi Garcia-Ojalvo

Publications by authors named "Jordi Garcia-Ojalvo"

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Integrate-and-fire network model of activity propagation from thalamus to cortex.

Biosystems 2019 Sep 29;183:103978. Epub 2019 May 29.

The Biorobotics Institute, Sant'Anna School of Advanced Studies, Viale Rinaldo Piaggio 34, 56025 Pontedera (PI), Italy. Electronic address:

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http://dx.doi.org/10.1016/j.biosystems.2019.103978DOI Listing
September 2019

Metabolic basis of brain-like electrical signalling in bacterial communities.

Philos Trans R Soc Lond B Biol Sci 2019 Jun;374(1774):20180382

1 Department of Experimental and Health Sciences, Universitat Pompeu Fabra , Barcelona Biomedical Research Park, Barcelona 08003 , Spain.

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http://dx.doi.org/10.1098/rstb.2018.0382DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6553584PMC
June 2019

Electrical Polarization Enables Integrative Quality Control during Bacterial Differentiation into Spores.

iScience 2019 Jun 5;16:378-389. Epub 2019 Jun 5.

School of Life Sciences, The University of Warwick, Coventry CV4 7AL, UK; Warwick Integrative Synthetic Biology Centre, The University of Warwick, Coventry CV4 7AL, UK; Bio-electrical Engineering Innovation Hub, The University of Warwick, Coventry CV4 7AL, UK. Electronic address:

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http://dx.doi.org/10.1016/j.isci.2019.05.044DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6586994PMC
June 2019

Magnesium Flux Modulates Ribosomes to Increase Bacterial Survival.

Cell 2019 Apr 7;177(2):352-360.e13. Epub 2019 Mar 7.

Molecular Biology Section, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA; San Diego Center for Systems Biology, University of California, San Diego, La Jolla, CA 92093-0380, USA; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA 92093-0380, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2019.01.042DOI Listing
April 2019

Self-Amplifying Pulsatile Protein Dynamics without Positive Feedback.

Cell Syst 2018 10 10;7(4):453-462.e1. Epub 2018 Oct 10.

Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB), Dr. Aiguader 88, Barcelona 08003, Spain. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S24054712183035
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http://dx.doi.org/10.1016/j.cels.2018.08.012DOI Listing
October 2018

Differentiating resting brain states using ordinal symbolic analysis.

Chaos 2018 Oct;28(10):106307

Departament de Física, Universitat Politècnica de Catalunya, Rambla St. Nebridi 22, 08222 Terrassa, Barcelona, Spain.

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http://dx.doi.org/10.1063/1.5036959DOI Listing
October 2018

Recurrence-based information processing in gene regulatory networks.

Chaos 2018 Oct;28(10):106313

Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Barcelona Biomedical Research Park, 08003 Barcelona, Spain.

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http://aip.scitation.org/doi/10.1063/1.5039861
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http://dx.doi.org/10.1063/1.5039861DOI Listing
October 2018

Bistable emergence of oscillations in growing biofilms.

Proc Natl Acad Sci U S A 2018 09 20;115(36):E8333-E8340. Epub 2018 Aug 20.

Department of Experimental and Health Sciences, Universitat Pompeu Fabra, 08003 Barcelona, Spain;

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http://dx.doi.org/10.1073/pnas.1805004115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6130386PMC
September 2018

Signal Percolation within a Bacterial Community.

Cell Syst 2018 08 25;7(2):137-145.e3. Epub 2018 Jul 25.

Division of Biological Sciences, University of California San Diego, Pacific Hall Room 2225B, Mail Code 0347, 9500 Gilman Drive, La Jolla, CA 92093, USA; San Diego Center for Systems Biology, University of California San Diego, La Jolla, CA 92093, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cels.2018.06.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6214369PMC
August 2018

Molecular Time Sharing through Dynamic Pulsing in Single Cells.

Cell Syst 2018 Feb 14;6(2):216-229.e15. Epub 2018 Feb 14.

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA; Howard Hughes Medical Institute, California Institute of Technology, Pasadena, CA 91125, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cels.2018.01.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6070344PMC
February 2018

Collective excitability in a mesoscopic neuronal model of epileptic activity.

Phys Rev E 2018 Jan;97(1-1):012204

Department of Experimental and Health Sciences, Universitat Pompeu Fabra (UPF), Parc de Recerca Biomèdica de Barcelona, Doctor Aiguader 88, E-08003 Barcelona, Spain.

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http://dx.doi.org/10.1103/PhysRevE.97.012204DOI Listing
January 2018

Dynamics and heterogeneity of brain damage in multiple sclerosis.

PLoS Comput Biol 2017 Oct 26;13(10):e1005757. Epub 2017 Oct 26.

Center for Neuroimmunology, Institut d'Investigacions Biomèdiques August Pi Sunyer (IDIBAPS), University of Barcelona, Barcelona, Spain.

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http://dx.doi.org/10.1371/journal.pcbi.1005757DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5657613PMC
October 2017

Cortical Spike Synchrony as a Measure of Input Familiarity.

Neural Comput 2017 09 9;29(9):2491-2510. Epub 2017 Jun 9.

Institute of Cognitive Science, University of Osnabrück, 49074 Osnabrück, Germany

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http://www.mitpressjournals.org/doi/abs/10.1162/neco_a_00987
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http://dx.doi.org/10.1162/NECO_a_00987DOI Listing
September 2017

Transition between Functional Regimes in an Integrate-And-Fire Network Model of the Thalamus.

PLoS One 2016 6;11(9):e0161934. Epub 2016 Sep 6.

The BioRobotics Institute, Scuola Superiore Sant'Anna, Pontedera, 56026, Italy.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0161934PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5012668PMC
August 2017

Impact of Zygosity on Bimodal Phenotype Distributions.

Biophys J 2017 Jul;113(1):148-156

Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Barcelona, Spain. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00063495173051
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http://dx.doi.org/10.1016/j.bpj.2017.05.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5510722PMC
July 2017

Coupling between distant biofilms and emergence of nutrient time-sharing.

Science 2017 05 6;356(6338):638-642. Epub 2017 Apr 6.

Division of Biological Sciences, University of California, San Diego, CA 92093, USA.

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http://dx.doi.org/10.1126/science.aah4204DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5645014PMC
May 2017

Diversity of fate outcomes in cell pairs under lateral inhibition.

Development 2017 04 7;144(7):1177-1186. Epub 2017 Feb 7.

European Cancer Stem Cell Research Institute, School of Biosciences, Cardiff University, Hadyn Ellis Building, Maindy Road, Cardiff CF24 4HQ, UK

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http://dev.biologists.org/lookup/doi/10.1242/dev.137950
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http://dx.doi.org/10.1242/dev.137950DOI Listing
April 2017

Temporally correlated fluctuations drive epileptiform dynamics.

Neuroimage 2017 02 16;146:188-196. Epub 2016 Nov 16.

College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter, UK; Centre for Biomedical Modelling and Analysis, University of Exeter, Exeter, UK; EPSRC Centre for Predictive Modelling in Healthcare, University of Exeter, Exeter, UK.

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http://dx.doi.org/10.1016/j.neuroimage.2016.11.034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5353705PMC
February 2017

Cell Lineage Trees Bear Fruit.

Cell Syst 2016 Dec;3(6):511-513

Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Barcelona Biomedical Research Park, Barcelona 08003, Spain. Electronic address:

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http://dx.doi.org/10.1016/j.cels.2016.12.006DOI Listing
December 2016

Mutual regulation causes co-entrainment between a synthetic oscillator and the bacterial cell cycle.

Integr Biol (Camb) 2016 Apr 17;8(4):533-41. Epub 2015 Dec 17.

Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Barcelona Biomedical Research Park, 08003 Barcelona, Spain.

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http://dx.doi.org/10.1039/c5ib00262aDOI Listing
April 2016

Biological Insights from Synthetic Biology.

Integr Biol (Camb) 2016 Apr 11;8(4):380-2. Epub 2016 Apr 11.

Department of Experimental and Health Sciences, Universitat Pompeu Fabra, 08003 Barcelona, Spain.

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http://dx.doi.org/10.1039/c6ib90013eDOI Listing
April 2016

Overexpression of Dyrk1A, a Down Syndrome Candidate, Decreases Excitability and Impairs Gamma Oscillations in the Prefrontal Cortex.

J Neurosci 2016 Mar;36(13):3648-59

Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, 08003 Barcelona, Spain, Pompeu Fabra University (UPF), 08003 Barcelona, Spain, Centre for Biomedical Research on Rare Diseases (CIBERER) 08003 Barcelona, Spain,

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http://dx.doi.org/10.1523/JNEUROSCI.2517-15.2016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6601739PMC
March 2016

Ion channels enable electrical communication in bacterial communities.

Nature 2015 Nov 21;527(7576):59-63. Epub 2015 Oct 21.

Division of Biological Sciences, University of California San Diego, California 92093, USA.

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http://dx.doi.org/10.1038/nature15709DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4890463PMC
November 2015

The analysis of semantic networks in multiple sclerosis identifies preferential damage of long-range connectivity.

Mult Scler Relat Disord 2015 Sep 8;4(5):387-394. Epub 2015 Jul 8.

Center of Neuroimmunology, Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS) - Hospital Clinic of Barcelona, Barcelona, Spain; Department of Neurology, University of California, San Francisco, USA. Electronic address:

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http://dx.doi.org/10.1016/j.msard.2015.07.002DOI Listing
September 2015

Synchronization-based computation through networks of coupled oscillators.

Front Comput Neurosci 2015 4;9:97. Epub 2015 Aug 4.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya Terrassa, Spain.

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http://dx.doi.org/10.3389/fncom.2015.00097DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4523791PMC
August 2015

Metabolic co-dependence gives rise to collective oscillations within biofilms.

Nature 2015 Jul 22;523(7562):550-4. Epub 2015 Jul 22.

Division of Biological Sciences, University of California San Diego, California 92093, USA.

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http://dx.doi.org/10.1038/nature14660DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4862617PMC
July 2015

Structural determinants of criticality in biological networks.

Front Physiol 2015 8;6:127. Epub 2015 May 8.

Department of Experimental and Health Sciences, Universitat Pompeu Fabra Barcelona, Spain.

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http://dx.doi.org/10.3389/fphys.2015.00127DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4424853PMC
May 2015

Cross-frequency transfer in a stochastically driven mesoscopic neuronal model.

Front Comput Neurosci 2015 16;9:14. Epub 2015 Feb 16.

Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Parc de Recerca Biomèdica de Barcelona Barcelona, Spain.

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http://dx.doi.org/10.3389/fncom.2015.00014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4329722PMC
March 2015

Mesoscopic segregation of excitation and inhibition in a brain network model.

PLoS Comput Biol 2015 Feb 11;11(2):e1004007. Epub 2015 Feb 11.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Terrassa, Spain.

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http://dx.doi.org/10.1371/journal.pcbi.1004007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4324935PMC
February 2015

Role of frequency mismatch in neuronal communication through coherence.

J Comput Neurosci 2014 Oct 12;37(2):193-208. Epub 2014 Feb 12.

Departament of Experimental and Health Sciences, Universitat Pompeu Fabra, Barcelona Biomedical Research Park, Barcelona, Spain,

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http://dx.doi.org/10.1007/s10827-014-0495-7DOI Listing
October 2014

Probing scale interaction in brain dynamics through synchronization.

Philos Trans R Soc Lond B Biol Sci 2014 Oct;369(1653)

Departament de Fìsica i Enginyeria Nuclear, Universitat Politécnica de Catalunya, Edifici Gaia, Rambla Sant Nebridi 22, 08222 Terrassa, Spain.

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http://dx.doi.org/10.1098/rstb.2013.0533DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4150308PMC
October 2014

Phase-coherence transitions and communication in the gamma range between delay-coupled neuronal populations.

PLoS Comput Biol 2014 Jul 24;10(7):e1003723. Epub 2014 Jul 24.

Departament of Experimental and Health Sciences, Universitat Pompeu Fabra, Barcelona Biomedical Research Park, Barcelona, Spain.

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http://dx.doi.org/10.1371/journal.pcbi.1003723DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4110076PMC
July 2014

A competitive protein interaction network buffers Oct4-mediated differentiation to promote pluripotency in embryonic stem cells.

Mol Syst Biol 2013 Oct 8;9:694. Epub 2013 Oct 8.

1] Department of Genetics, University of Cambridge, Cambridge, UK [2] Biology and Biochemistry Department, University of Bath, Bath, UK.

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http://dx.doi.org/10.1038/msb.2013.49DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3817399PMC
October 2013

Modeling gene expression in time and space.

Annu Rev Biophys 2013 ;42:605-27

Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Barcelona Biomedical Research Park, 08003 Barcelona, Spain.

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http://dx.doi.org/10.1146/annurev-biophys-083012-130335DOI Listing
July 2013

Circuit-level input integration in bacterial gene regulation.

Proc Natl Acad Sci U S A 2013 Apr 9;110(17):7091-6. Epub 2013 Apr 9.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, 08222 Terrassa, Spain.

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http://dx.doi.org/10.1073/pnas.1216091110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3637709PMC
April 2013

Dynamic cross-regulation of antigen-specific effector and regulatory T cell subpopulations and microglia in brain autoimmunity.

BMC Syst Biol 2013 Apr 26;7:34. Epub 2013 Apr 26.

Center of Neuroimmunology, Institute of Biomedical Research August Pi Sunyer (IDIBAPS), Hospital Clinic of Barcelona, Barcelona, Spain.

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http://dx.doi.org/10.1186/1752-0509-7-34DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3651362PMC
April 2013

Correlations between the levels of Oct4 and Nanog as a signature for naïve pluripotency in mouse embryonic stem cells.

Stem Cells 2012 Dec;30(12):2683-91

Department of Genetics, University of Cambridge, Cambridge, United Kingdom.

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http://dx.doi.org/10.1002/stem.1230DOI Listing
December 2012

Towards a statistical mechanics of cell fate decisions.

Curr Opin Genet Dev 2012 Dec 28;22(6):619-26. Epub 2012 Nov 28.

Department of Experimental and Health Sciences, Universitat Pompeu Fabra, Barcelona Biomedical Research Park, 08003 Barcelona, Spain.

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http://dx.doi.org/10.1016/j.gde.2012.10.004DOI Listing
December 2012

Localized cell death focuses mechanical forces during 3D patterning in a biofilm.

Proc Natl Acad Sci U S A 2012 Nov 24;109(46):18891-6. Epub 2012 Sep 24.

Section of Molecular Biology, Division of Biological Sciences, University of California at San Diego, La Jolla, CA 92093, USA.

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http://www.pnas.org/cgi/doi/10.1073/pnas.1212429109
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http://dx.doi.org/10.1073/pnas.1212429109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3503208PMC
November 2012

Dynamical consequences of bandpass feedback loops in a bacterial phosphorelay.

PLoS One 2011 29;6(9):e25102. Epub 2011 Sep 29.

Department of Control and Dynamical Systems, Division of Engineering and Applied Science, California Institute of Technology, Pasadena, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0025102PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3182994PMC
March 2012

Temporal competition between differentiation programs determines cell fate choice.

Mol Syst Biol 2011 Dec 6;7:557. Epub 2011 Dec 6.

Green Center for Systems Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.

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http://dx.doi.org/10.1038/msb.2011.88DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3737729PMC
December 2011

Information routing driven by background chatter in a signaling network.

PLoS Comput Biol 2011 Dec 8;7(12):e1002297. Epub 2011 Dec 8.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Terrassa, Barcelona, Spain.

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http://dx.plos.org/10.1371/journal.pcbi.1002297
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http://dx.doi.org/10.1371/journal.pcbi.1002297DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3234210PMC
December 2011

Reversible and noisy progression towards a commitment point enables adaptable and reliable cellular decision-making.

PLoS Comput Biol 2011 Nov 10;7(11):e1002273. Epub 2011 Nov 10.

Green Center for Systems Biology, University of Texas Southwestern Medical Center, Dallas, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.1002273DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3213189PMC
November 2011

Language organization and temporal correlations in the spiking activity of an excitable laser: experiments and model comparison.

Phys Rev E Stat Nonlin Soft Matter Phys 2011 Aug 9;84(2 Pt 2):026202. Epub 2011 Aug 9.

Facultad de Ciencias, Instituto de Física, Universidad de la República, Iguá 4225, Montevideo, Uruguay.

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http://dx.doi.org/10.1103/PhysRevE.84.026202DOI Listing
August 2011

Mutual inactivation of Notch receptors and ligands facilitates developmental patterning.

PLoS Comput Biol 2011 Jun 9;7(6):e1002069. Epub 2011 Jun 9.

Howard Hughes Medical Institute, California Institute of Technology, Pasadena, California, USA.

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http://dx.doi.org/10.1371/journal.pcbi.1002069DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3111533PMC
June 2011

Optimizing periodicity and polymodality in noise-induced genetic oscillators.

Phys Rev E Stat Nonlin Soft Matter Phys 2011 Jun 6;83(6 Pt 1):061904. Epub 2011 Jun 6.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Edifici GAIA, Barcelona, Spain.

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https://link.aps.org/doi/10.1103/PhysRevE.83.061904
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http://dx.doi.org/10.1103/PhysRevE.83.061904DOI Listing
June 2011

Gene circuit designs for noisy excitable dynamics.

Math Biosci 2011 May 22;231(1):90-7. Epub 2011 Mar 22.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Edifici GAIA, Barcelona, Spain.

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http://dx.doi.org/10.1016/j.mbs.2011.02.013DOI Listing
May 2011

Crowd synchrony and quorum sensing in delay-coupled lasers.

Phys Rev Lett 2010 Dec 22;105(26):264101. Epub 2010 Dec 22.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Edifici GAIA, Terrassa, Barcelona, Spain.

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http://dx.doi.org/10.1103/PhysRevLett.105.264101DOI Listing
December 2010

Relating structural and functional anomalous connectivity in the aging brain via neural mass modeling.

Neuroimage 2010 Sep 4;52(3):848-61. Epub 2010 Jan 4.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Edifici GAIA, Rambla Sant Nebridi s/n, 08222 Terrassa, Spain.

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http://dx.doi.org/10.1016/j.neuroimage.2009.12.105DOI Listing
September 2010

Cis-interactions between Notch and Delta generate mutually exclusive signalling states.

Nature 2010 May 25;465(7294):86-90. Epub 2010 Apr 25.

Howard Hughes Medical Institute, Division of Biology and Department of Applied Physics, California Institute of Technology, 1200 East California Boulevard, Pasadena, California 91125, USA.

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http://dx.doi.org/10.1038/nature08959DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2886601PMC
May 2010

Quantifying stochasticity in the dynamics of delay-coupled semiconductor lasers via forbidden patterns.

Philos Trans A Math Phys Eng Sci 2010 Jan;368(1911):367-77

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, 08222 Terrassa, Barcelona, Spain.

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http://dx.doi.org/10.1098/rsta.2009.0241DOI Listing
January 2010

Architecture-dependent noise discriminates functionally analogous differentiation circuits.

Cell 2009 Oct 22;139(3):512-22. Epub 2009 Oct 22.

Green Center for Systems Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.

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http://dx.doi.org/10.1016/j.cell.2009.07.046DOI Listing
October 2009

Dynamics of globally delay-coupled neurons displaying subthreshold oscillations.

Philos Trans A Math Phys Eng Sci 2009 Aug;367(1901):3255-66

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, 08222 Terrassa, Barcelona, Spain.

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http://dx.doi.org/10.1098/rsta.2009.0096DOI Listing
August 2009

An intersegmental neuronal architecture for spinal wave propagation under deletions.

J Neurosci 2009 Aug;29(33):10254-63

Instituto de Física Interdisciplinar y Sistemas Complejos, Consejo Superior de Investigaciones Científicas-Universidad de las Islas Baleares, Campus Universitat de les Illes Balears, Palma de Mallorca, Spain.

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http://dx.doi.org/10.1523/JNEUROSCI.1737-09.2009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6665792PMC
August 2009

Timing cellular decision making under noise via cell-cell communication.

PLoS One 2009 13;4(3):e4872. Epub 2009 Mar 13.

Center for Dynamics of Complex Systems, University of Potsdam, Potsdam, Germany.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0004872PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2652718PMC
May 2009

Noise-induced coherence in multicellular circadian clocks.

Biophys J 2009 May;96(9):3573-81

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Terrassa, Spain.

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http://dx.doi.org/10.1016/j.bpj.2009.02.031DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2711409PMC
May 2009

Noise-induced phase bistability via stochastic rocking.

Phys Rev Lett 2009 Jan 5;102(1):010601. Epub 2009 Jan 5.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, 08222 Terrassa, Spain.

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http://dx.doi.org/10.1103/PhysRevLett.102.010601DOI Listing
January 2009

A genetic timer through noise-induced stabilization of an unstable state.

Proc Natl Acad Sci U S A 2008 Oct 3;105(41):15732-7. Epub 2008 Oct 3.

Department of Pharmacology, University of Texas Southwestern Medical Center, Dallas, TX 753903, USA.

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http://dx.doi.org/10.1073/pnas.0806349105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2560995PMC
October 2008

Interplay of subthreshold activity, time-delayed feedback, and noise on neuronal firing patterns.

Phys Rev E Stat Nonlin Soft Matter Phys 2008 Oct 8;78(4 Pt 1):041907. Epub 2008 Oct 8.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, E-08222 Terrassa, Barcelona, Spain.

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http://dx.doi.org/10.1103/PhysRevE.78.041907DOI Listing
October 2008

Multistability of synthetic genetic networks with repressive cell-to-cell communication.

Phys Rev E Stat Nonlin Soft Matter Phys 2008 Sep 5;78(3 Pt 1):031904. Epub 2008 Sep 5.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, E-08222 Terrassa, Spain.

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September 2008

Synchronization of coupled biological oscillators under spatially heterogeneous environmental forcing.

J Theor Biol 2008 Jan 29;250(1):37-47. Epub 2007 Sep 29.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, 08222 Terrassa/Barcelona, Spain.

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http://dx.doi.org/10.1016/j.jtbi.2007.09.036DOI Listing
January 2008

Multistability and clustering in a population of synthetic genetic oscillators via phase-repulsive cell-to-cell communication.

Phys Rev Lett 2007 Oct 2;99(14):148103. Epub 2007 Oct 2.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, E-08222, Terrassa, Spain.

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http://dx.doi.org/10.1103/PhysRevLett.99.148103DOI Listing
October 2007

Controlling the leader-laggard dynamics in delay-synchronized lasers.

Chaos 2007 Sep;17(3):033122

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, E-08222 Terrassa, Spain.

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http://dx.doi.org/10.1063/1.2780131DOI Listing
September 2007

PERIOD-TIMELESS interval timer may require an additional feedback loop.

PLoS Comput Biol 2007 Aug;3(8):e154

School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, New York, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.0030154DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1937016PMC
August 2007

Ghost resonance in a pool of heterogeneous neurons.

Biosystems 2007 May-Jun;89(1-3):166-72. Epub 2006 Nov 12.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, E-08222 Terrassa, Spain.

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http://dx.doi.org/10.1016/j.biosystems.2006.04.014DOI Listing
June 2007

Tunability and noise dependence in differentiation dynamics.

Science 2007 Mar;315(5819):1716-9

Green Center Division for Systems Biology and Department of Pharmacology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.

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http://dx.doi.org/10.1126/science.1137455DOI Listing
March 2007

Coincidence detection of inharmonic pulses in a nonlinear crystal.

Phys Rev E Stat Nonlin Soft Matter Phys 2007 Jan 23;75(1 Pt 1):012902. Epub 2007 Jan 23.

ICFO-Institut de Ciencies Fotoniques, Mediterranian Technology Park, 08860 Castelldefels, Spain.

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http://dx.doi.org/10.1103/PhysRevE.75.012902DOI Listing
January 2007

Synchronization by dynamical relaying in electronic circuit arrays.

Chaos 2006 Dec;16(4):043113

Departament de Física, Universitat de les Illes Balears, E-07122 Palma de Mallorca, Spain.

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http://dx.doi.org/10.1063/1.2374860DOI Listing
December 2006

Bistable phase control via rocking in a nonlinear electronic oscillator.

Chaos 2006 Dec;16(4):043126

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, 08222 Terrassa, Spain.

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http://dx.doi.org/10.1063/1.2404776DOI Listing
December 2006

Episodic synchronization in dynamically driven neurons.

Phys Rev E Stat Nonlin Soft Matter Phys 2006 Dec 26;74(6 Pt 1):061910. Epub 2006 Dec 26.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, E-08222 Terrassa, Spain.

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http://dx.doi.org/10.1103/PhysRevE.74.061910DOI Listing
December 2006

Zero-lag long-range synchronization via dynamical relaying.

Phys Rev Lett 2006 Sep 19;97(12):123902. Epub 2006 Sep 19.

Department of Applied Physics and Photonics, Vrije Universiteit Brussel, Pleinlaan 2, B-1050 Brussel, Belgium.

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September 2006

Synchronization and symmetry breaking in mutually coupled fiber lasers.

Phys Rev E Stat Nonlin Soft Matter Phys 2006 Apr 11;73(4 Pt 2):045201. Epub 2006 Apr 11.

Department of Physics and Institute for Research in Electronics and Applied Physics, University of Maryland, College Park, Maryland 20742, USA.

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http://dx.doi.org/10.1103/PhysRevE.73.045201DOI Listing
April 2006

An excitable gene regulatory circuit induces transient cellular differentiation.

Nature 2006 Mar;440(7083):545-50

Division of Biology and Department of Applied Physics, California Institute of Technology, Pasadena, California 91125, USA.

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http://dx.doi.org/10.1038/nature04588DOI Listing
March 2006

Synchronization of electronic genetic networks.

Chaos 2006 Mar;16(1):013127

Nonlinear Dynamics and Chaos Group, Departamento de Matemáticas y Física Aplicadas y Ciencias de la Naturaleza, Universidad Rey Juan Carlos, Tulipán s/n, 28933 Móstoles, Madrid, Spain.

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http://dx.doi.org/10.1063/1.2173048DOI Listing
March 2006

Ghost stochastic resonance with distributed inputs in pulse-coupled electronic neurons.

Phys Rev E Stat Nonlin Soft Matter Phys 2006 Feb 8;73(2 Pt 1):021101. Epub 2006 Feb 8.

Departamento de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, E-08222 Terrassa, Spain.

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http://dx.doi.org/10.1103/PhysRevE.73.021101DOI Listing
February 2006

Episodic synchronization via dynamic injection.

Phys Rev Lett 2006 Jan 17;96(2):024102. Epub 2006 Jan 17.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, 08222 Terrassa, Spain.

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http://dx.doi.org/10.1103/PhysRevLett.96.024102DOI Listing
January 2006

Role of chemical synapses in coupled neurons with noise.

Phys Rev E Stat Nonlin Soft Matter Phys 2005 Aug 1;72(2 Pt 1):021901. Epub 2005 Aug 1.

Departament de Física i Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, E-08222 Terrassa, Spain.

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http://dx.doi.org/10.1103/PhysRevE.72.021901DOI Listing
August 2005

Neural mechanism for binaural pitch perception via ghost stochastic resonance.

Chaos 2005 Jun;15(2):23903

Departament de Física e Enginyeria Nuclear, Universitat Politècnica de Catalunya, Colom 11, E-08222 Terrassa, Spain.

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http://dx.doi.org/10.1063/1.1871612DOI Listing
June 2005

Modeling a synthetic multicellular clock: repressilators coupled by quorum sensing.

Proc Natl Acad Sci U S A 2004 Jul 15;101(30):10955-60. Epub 2004 Jul 15.

Center for Applied Mathematics, Cornell University, Ithaca, NY 14853, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC503725PMC
July 2004