John W Keele

John W Keele

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John W Keele

Publications by authors named "John W Keele"

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Animal and plant factors which affect larkspur toxicosis in cattle: Sex, age, breed, and plant chemotype.

Toxicon 2019 Jul 25;165:31-39. Epub 2019 Apr 25.

USDA-ARS, Poisonous Plant Research Laboratory, Logan, UT 84341, United States.

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http://dx.doi.org/10.1016/j.toxicon.2019.04.013DOI Listing
July 2019

Microbiome of the upper nasal cavity of beef calves prior to weaning12.

J Anim Sci 2019 May;97(6):2368-2375

USDA, ARS, U.S. Meat Animal Research Center, Clay Center, NE.

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http://dx.doi.org/10.1093/jas/skz119DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6541832PMC
May 2019

Genetic variation in humoral response to an Escherichia coli O157:H7 vaccine in beef cattle.

PLoS One 2018 14;13(5):e0197347. Epub 2018 May 14.

Department of Animal Science, South Dakota State University, Brookings, South Dakota, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0197347PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5951538PMC
December 2018

Transcriptome differences in the rumen of beef steers with variation in feed intake and gain.

Gene 2016 Jul 29;586(1):12-26. Epub 2016 Mar 29.

Department of Animal Science, University of Wyoming, Laramie, WY 82070, USA. Electronic address:

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http://dx.doi.org/10.1016/j.gene.2016.03.034DOI Listing
July 2016

Gene number determination and genetic polymorphism of the gamma delta T cell co-receptor WC1 genes.

BMC Genet 2012 Oct 16;13:86. Epub 2012 Oct 16.

Department of Veterinary and Animal Sciences, University of Massachusetts, Amherst, MA 01003, USA.

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http://dx.doi.org/10.1186/1471-2156-13-86DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3511184PMC
October 2012

Genomic regions associated with kyphosis in swine.

BMC Genet 2010 Dec 21;11:112. Epub 2010 Dec 21.

USDA, ARS, U,S, Meat Animal Research Center, Clay Center, NE 68933-0166, USA.

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http://dx.doi.org/10.1186/1471-2156-11-112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3018398PMC
December 2010

The genome sequence of taurine cattle: a window to ruminant biology and evolution.

Authors:
Christine G Elsik Ross L Tellam Kim C Worley Richard A Gibbs Donna M Muzny George M Weinstock David L Adelson Evan E Eichler Laura Elnitski Roderic Guigó Debora L Hamernik Steve M Kappes Harris A Lewin David J Lynn Frank W Nicholas Alexandre Reymond Monique Rijnkels Loren C Skow Evgeny M Zdobnov Lawrence Schook James Womack Tyler Alioto Stylianos E Antonarakis Alex Astashyn Charles E Chapple Hsiu-Chuan Chen Jacqueline Chrast Francisco Câmara Olga Ermolaeva Charlotte N Henrichsen Wratko Hlavina Yuri Kapustin Boris Kiryutin Paul Kitts Felix Kokocinski Melissa Landrum Donna Maglott Kim Pruitt Victor Sapojnikov Stephen M Searle Victor Solovyev Alexandre Souvorov Catherine Ucla Carine Wyss Juan M Anzola Daniel Gerlach Eran Elhaik Dan Graur Justin T Reese Robert C Edgar John C McEwan Gemma M Payne Joy M Raison Thomas Junier Evgenia V Kriventseva Eduardo Eyras Mireya Plass Ravikiran Donthu Denis M Larkin James Reecy Mary Q Yang Lin Chen Ze Cheng Carol G Chitko-McKown George E Liu Lakshmi K Matukumalli Jiuzhou Song Bin Zhu Daniel G Bradley Fiona S L Brinkman Lilian P L Lau Matthew D Whiteside Angela Walker Thomas T Wheeler Theresa Casey J Bruce German Danielle G Lemay Nauman J Maqbool Adrian J Molenaar Seongwon Seo Paul Stothard Cynthia L Baldwin Rebecca Baxter Candice L Brinkmeyer-Langford Wendy C Brown Christopher P Childers Timothy Connelley Shirley A Ellis Krista Fritz Elizabeth J Glass Carolyn T A Herzig Antti Iivanainen Kevin K Lahmers Anna K Bennett C Michael Dickens James G R Gilbert Darren E Hagen Hanni Salih Jan Aerts Alexandre R Caetano Brian Dalrymple Jose Fernando Garcia Clare A Gill Stefan G Hiendleder Erdogan Memili Diane Spurlock John L Williams Lee Alexander Michael J Brownstein Leluo Guan Robert A Holt Steven J M Jones Marco A Marra Richard Moore Stephen S Moore Andy Roberts Masaaki Taniguchi Richard C Waterman Joseph Chacko Mimi M Chandrabose Andy Cree Marvin Diep Dao Huyen H Dinh Ramatu Ayiesha Gabisi Sandra Hines Jennifer Hume Shalini N Jhangiani Vandita Joshi Christie L Kovar Lora R Lewis Yih-Shin Liu John Lopez Margaret B Morgan Ngoc Bich Nguyen Geoffrey O Okwuonu San Juana Ruiz Jireh Santibanez Rita A Wright Christian Buhay Yan Ding Shannon Dugan-Rocha Judith Herdandez Michael Holder Aniko Sabo Amy Egan Jason Goodell Katarzyna Wilczek-Boney Gerald R Fowler Matthew Edward Hitchens Ryan J Lozado Charles Moen David Steffen James T Warren Jingkun Zhang Readman Chiu Jacqueline E Schein K James Durbin Paul Havlak Huaiyang Jiang Yue Liu Xiang Qin Yanru Ren Yufeng Shen Henry Song Stephanie Nicole Bell Clay Davis Angela Jolivet Johnson Sandra Lee Lynne V Nazareth Bella Mayurkumar Patel Ling-Ling Pu Selina Vattathil Rex Lee Williams Stacey Curry Cerissa Hamilton Erica Sodergren David A Wheeler Wes Barris Gary L Bennett André Eggen Ronnie D Green Gregory P Harhay Matthew Hobbs Oliver Jann John W Keele Matthew P Kent Sigbjørn Lien Stephanie D McKay Sean McWilliam Abhirami Ratnakumar Robert D Schnabel Timothy Smith Warren M Snelling Tad S Sonstegard Roger T Stone Yoshikazu Sugimoto Akiko Takasuga Jeremy F Taylor Curtis P Van Tassell Michael D Macneil Antonio R R Abatepaulo Colette A Abbey Virpi Ahola Iassudara G Almeida Ariel F Amadio Elen Anatriello Suria M Bahadue Fernando H Biase Clayton R Boldt Jeffery A Carroll Wanessa A Carvalho Eliane P Cervelatti Elsa Chacko Jennifer E Chapin Ye Cheng Jungwoo Choi Adam J Colley Tatiana A de Campos Marcos De Donato Isabel K F de Miranda Santos Carlo J F de Oliveira Heather Deobald Eve Devinoy Kaitlin E Donohue Peter Dovc Annett Eberlein Carolyn J Fitzsimmons Alessandra M Franzin Gustavo R Garcia Sem Genini Cody J Gladney Jason R Grant Marion L Greaser Jonathan A Green Darryl L Hadsell Hatam A Hakimov Rob Halgren Jennifer L Harrow Elizabeth A Hart Nicola Hastings Marta Hernandez Zhi-Liang Hu Aaron Ingham Terhi Iso-Touru Catherine Jamis Kirsty Jensen Dimos Kapetis Tovah Kerr Sari S Khalil Hasan Khatib Davood Kolbehdari Charu G Kumar Dinesh Kumar Richard Leach Justin C-M Lee Changxi Li Krystin M Logan Roberto Malinverni Elisa Marques William F Martin Natalia F Martins Sandra R Maruyama Raffaele Mazza Kim L McLean Juan F Medrano Barbara T Moreno Daniela D Moré Carl T Muntean Hari P Nandakumar Marcelo F G Nogueira Ingrid Olsaker Sameer D Pant Francesca Panzitta Rosemeire C P Pastor Mario A Poli Nathan Poslusny Satyanarayana Rachagani Shoba Ranganathan Andrej Razpet Penny K Riggs Gonzalo Rincon Nelida Rodriguez-Osorio Sandra L Rodriguez-Zas Natasha E Romero Anne Rosenwald Lillian Sando Sheila M Schmutz Libing Shen Laura Sherman Bruce R Southey Ylva Strandberg Lutzow Jonathan V Sweedler Imke Tammen Bhanu Prakash V L Telugu Jennifer M Urbanski Yuri T Utsunomiya Chris P Verschoor Ashley J Waardenberg Zhiquan Wang Robert Ward Rosemarie Weikard Thomas H Welsh Stephen N White Laurens G Wilming Kris R Wunderlich Jianqi Yang Feng-Qi Zhao

Science 2009 Apr;324(5926):522-8

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http://dx.doi.org/10.1126/science.1169588DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2943200PMC
April 2009

A sequencing strategy for identifying variation throughout the prion gene of BSE-affected cattle.

BMC Res Notes 2008 Jun 23;1:32. Epub 2008 Jun 23.

United States Department of Agriculture (USDA), Agricultural Research Service (ARS), US Meat Animal Research Center (USMARC), Clay Center, NE 68933, USA.

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http://dx.doi.org/10.1186/1756-0500-1-32DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2525647PMC
June 2008

Novel porcine repetitive elements.

BMC Genomics 2006 Dec 1;7:304. Epub 2006 Dec 1.

USDA, ARS U, S, Meat Animal Research Center, Clay Center, NE, USA.

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http://dx.doi.org/10.1186/1471-2164-7-304DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1713245PMC
December 2006

Prion gene haplotypes of U.S. cattle.

BMC Genet 2006 Nov 8;7:51. Epub 2006 Nov 8.

United States Department of Agriculture, Agricultural Research Service, U,S, Meat Animal Research Center, Clay Center, NE 68933, USA.

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http://dx.doi.org/10.1186/1471-2156-7-51DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1654178PMC
November 2006

Software agents in molecular computational biology.

Brief Bioinform 2005 Dec;6(4):370-9

United States Meat Animal Research Center, State Spur 18D, Clay Center, Nebraska 68933, USA.

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http://dx.doi.org/10.1093/bib/6.4.370DOI Listing
December 2005

Linkage mapping bovine EST-based SNP.

BMC Genomics 2005 May 19;6:74. Epub 2005 May 19.

US Meat Animal Research Center, Agricultural Research Service, US Department of Agriculture, Clay Center, Nebraska 68933-0166, USA.

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http://dx.doi.org/10.1186/1471-2164-6-74DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1166549PMC
May 2005

Beta-2-microglobulin haplotypes in U.S. beef cattle and association with failure of passive transfer in newborn calves.

Mamm Genome 2004 Mar;15(3):227-36

United States Department of Agriculture, Agricultural Research Service, U.S. Meat Animal Research Center (MARC), Spur 18D, P.O. Box 166, Clay Center, Nebraska 68933, USA.

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http://link.springer.com/content/pdf/10.1007%2Fs00335-003-23
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http://link.springer.com/10.1007/s00335-003-2320-x
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http://dx.doi.org/10.1007/s00335-003-2320-xDOI Listing
March 2004

Prion gene sequence variation within diverse groups of U.S. sheep, beef cattle, and deer.

Mamm Genome 2003 Nov;14(11):765-77

USDA, ARS, U.S. Meat Animal Research Center (MARC), State Spur 18D, P.O. Box 166, Clay Center, Nebraska 68933-0166, USA.

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http://dx.doi.org/10.1007/s00335-003-2283-yDOI Listing
November 2003

Positional candidate gene selection from livestock EST databases using Gene Ontology.

Bioinformatics 2003 Jan;19(2):249-55

US Department of Agriculture, ARS, Roman L. Hruska US Meat Animal Research Center, Production Systems, Clay Center, NE 68933, USA.

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http://dx.doi.org/10.1093/bioinformatics/19.2.249DOI Listing
January 2003

Association of bovine neonatal Fc receptor alpha-chain gene (FCGRT) haplotypes with serum IgG concentration in newborn calves.

Mamm Genome 2002 Dec;13(12):704-10

United States Department of Agriculture, Agricultural Research Service, U.S. Meat Animal Research Center (MARC), P.O. Box 166, State Spur 18D, Clay Center, Nebraska 68933, USA.

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http://www.springerlink.com/index/wt7eunmvkv1k5fxg.pdf
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http://link.springer.com/10.1007/s00335-002-2219-y
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http://dx.doi.org/10.1007/s00335-002-2219-yDOI Listing
December 2002

Identification of the single base change causing the callipyge muscle hypertrophy phenotype, the only known example of polar overdominance in mammals.

Genome Res 2002 Oct;12(10):1496-506

U.S. Department of Agriculture, Agricultural Research Service, U.S. Meat Animal Research Center, Clay Center, Nebraska 68933-0166, USA.

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http://dx.doi.org/10.1101/gr.571002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC187527PMC
October 2002

Porcine gene discovery by normalized cDNA-library sequencing and EST cluster assembly.

Mamm Genome 2002 Aug;13(8):475-8

USDA, ARS, U.S. Meat Animal Research Center, P.O. Box 166, Clay Center, Nebraska 68933, USA.

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http://dx.doi.org/10.1007/s00335-001-2072-4DOI Listing
August 2002

Selection and use of SNP markers for animal identification and paternity analysis in U.S. beef cattle.

Mamm Genome 2002 May;13(5):272-81

USDA, ARS, U.S. Meat Animal Research Center (MARC), State Spur 18D, P.O. Box 166, Clay Center, Nebraska 68933-0166, USA.

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http://dx.doi.org/10.1007/s00335-001-2146-3DOI Listing
May 2002

Use of bovine EST data and human genomic sequences to map 100 gene-specific bovine markers.

Mamm Genome 2002 Apr;13(4):211-5

U.S. Meat Animal Research Center, ARS, USDA, P.O. Box 166, Clay Center, Nebraska 68933-0166, USA.

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http://dx.doi.org/10.1007/s00335-001-2124-9DOI Listing
April 2002