John Rathjen

John Rathjen

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John Rathjen

John Rathjen

Publications by authors named "John Rathjen"

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Long-read sequencing based clinical metagenomics for the detection and confirmation of Pneumocystis jirovecii directly from clinical specimens: A paradigm shift in mycological diagnostics.

Med Mycol 2019 Nov 23. Epub 2019 Nov 23.

Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Faculty of Medicine and Health, Sydney Medical School, Westmead Clinical School, The University of Sydney, Sydney, NSW, Australia.

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http://dx.doi.org/10.1093/mmy/myz109DOI Listing
November 2019

Harnessing the MinION: An example of how to establish long-read sequencing in a laboratory using challenging plant tissue from Eucalyptus pauciflora.

Mol Ecol Resour 2019 Jan 5;19(1):77-89. Epub 2018 Oct 5.

Research School of Biology, The Australian National University, Acton, ACT, Australia.

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http://dx.doi.org/10.1111/1755-0998.12938DOI Listing
January 2019

Development of a Rapid BioID System as a Probe for Plasma Membrane-Associated Immunity Proteins.

Front Plant Sci 2018 18;9:1882. Epub 2018 Dec 18.

Research School of Biology, The Australian National University, Acton, ACT, Australia.

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http://dx.doi.org/10.3389/fpls.2018.01882DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6305590PMC
December 2018

Extraction of High Molecular Weight DNA from Fungal Rust Spores for Long Read Sequencing.

Methods Mol Biol 2017 ;1659:49-57

Research School of Biology, Australian National University, Linnaeus Way, Canberra, CT, Australia.

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http://dx.doi.org/10.1007/978-1-4939-7249-4_5DOI Listing
May 2018

Apoplastic Sugar Extraction and Quantification from Wheat Leaves Infected with Biotrophic Fungi.

Methods Mol Biol 2017 ;1659:125-134

Research School of Biology, Australian National University, Linnaeus Way, Canberra, Australia.

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http://dx.doi.org/10.1007/978-1-4939-7249-4_11DOI Listing
May 2018

Dancing with the Stars: An Asterid NLR Family.

Trends Plant Sci 2017 12 10;22(12):1003-1005. Epub 2017 Oct 10.

Research School of Biology, The Australian National University, 134 Linnaeus Way, Acton 2601, ACT, Australia; CSIRO Agriculture & Food, Black Mountain 2601, ACT, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.tplants.2017.09.018DOI Listing
December 2017

Strategies for Wheat Stripe Rust Pathogenicity Identified by Transcriptome Sequencing.

PLoS One 2013 26;8(6):e67150. Epub 2013 Jun 26.

Research School of Biology, Australian National University, Canberra, Australian Capital Territory, Australia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0067150PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3694141PMC
October 2017

NbCSPR underlies age-dependent immune responses to bacterial cold shock protein in Nicotiana benthamiana.

Proc Natl Acad Sci U S A 2016 Mar 4;113(12):3389-94. Epub 2016 Mar 4.

Research School of Biology, The Australian National University, Acton, ACT 2601, Australia;

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http://dx.doi.org/10.1073/pnas.1511847113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4812737PMC
March 2016

Changing SERKs and priorities during plant life.

Trends Plant Sci 2015 Sep 26;20(9):531-3. Epub 2015 Jun 26.

The Australian National University, Research School of Biology, 134 Linnaeus Way, Acton, ACT 2601, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.tplants.2015.06.006DOI Listing
September 2015

The N-terminal domain of the tomato immune protein Prf contains multiple homotypic and Pto kinase interaction sites.

J Biol Chem 2015 May 19;290(18):11258-67. Epub 2015 Mar 19.

From the Research School of Biology, The Australian National University, Acton ACT 2601, Australia

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http://dx.doi.org/10.1074/jbc.M114.616532DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4416833PMC
May 2015

Purification of fungal haustoria from infected plant tissue by flow cytometry.

Methods Mol Biol 2014 ;1127:103-10

The Australian National University, Research School of Biology, Linnaeus Building #134, Linnaeus Way, Acton, ACT, 0200, Australia.

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http://dx.doi.org/10.1007/978-1-62703-986-4_8DOI Listing
November 2014

The calcium-dependent protein kinase CPK28 buffers plant immunity and regulates BIK1 turnover.

Cell Host Microbe 2014 Nov 12;16(5):605-15. Epub 2014 Nov 12.

The Sainsbury Laboratory, Norwich Research Park, NR4 7UH Norwich, UK. Electronic address:

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http://dx.doi.org/10.1016/j.chom.2014.10.007DOI Listing
November 2014

The ins and outs of rust haustoria.

PLoS Pathog 2014 Sep 11;10(9):e1004329. Epub 2014 Sep 11.

Division of Plant Industry, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Canberra, Australian Capital Territory, Australia.

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http://dx.doi.org/10.1371/journal.ppat.1004329DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4161442PMC
September 2014

The changing of the guard: the Pto/Prf receptor complex of tomato and pathogen recognition.

Curr Opin Plant Biol 2014 Aug 20;20:69-74. Epub 2014 May 20.

Research School of Biology, The Australian National University, Acton 0200, Australian Capital Territory, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.pbi.2014.04.002DOI Listing
August 2014

The bacterial effector HopX1 targets JAZ transcriptional repressors to activate jasmonate signaling and promote infection in Arabidopsis.

PLoS Biol 2014 Feb 18;12(2):e1001792. Epub 2014 Feb 18.

Departamento de Genética Molecular de Plantas, Centro Nacional de Biotecnología-Consejo Superior de Investigaciones Científicas, Madrid, Spain.

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http://dx.doi.org/10.1371/journal.pbio.1001792DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3928049PMC
February 2014

The Pseudomonas type III effector HopQ1 activates cytokinin signaling and interferes with plant innate immunity.

New Phytol 2014 Jan 11;201(2):585-98. Epub 2013 Oct 11.

Section of Plant Physiology, Botanical Institute, Hebelstrasse 1, CH-4056, Basel, Switzerland.

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http://doi.wiley.com/10.1111/nph.12544
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http://dx.doi.org/10.1111/nph.12544DOI Listing
January 2014

The tomato Prf complex is a molecular trap for bacterial effectors based on Pto transphosphorylation.

PLoS Pathog 2013 Jan 31;9(1):e1003123. Epub 2013 Jan 31.

School of Life Sciences, University of Warwick, Coventry, United Kingdom.

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http://dx.doi.org/10.1371/journal.ppat.1003123DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561153PMC
January 2013

Aspartate oxidase plays an important role in Arabidopsis stomatal immunity.

Plant Physiol 2012 Aug 22;159(4):1845-56. Epub 2012 Jun 22.

Sainsbury Laboratory, Norwich Research Park, Norwich NR4 7UH, United Kingdom.

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http://dx.doi.org/10.1104/pp.112.199810DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3425217PMC
August 2012

Gibberellin biosynthesis and signalling during development of the strawberry receptacle.

New Phytol 2011 Jul 28;191(2):376-90. Epub 2011 Mar 28.

Instituto de Hortofruticultura Subtropical y Mediterránea, Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Departamento de Biología Molecular y Bioquímica, Málaga, Spain.

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http://doi.wiley.com/10.1111/j.1469-8137.2011.03700.x
Publisher Site
http://dx.doi.org/10.1111/j.1469-8137.2011.03700.xDOI Listing
July 2011

The long and winding road: virulence effector proteins of plant pathogenic bacteria.

Cell Mol Life Sci 2010 Oct 13;67(20):3425-34. Epub 2010 Jun 13.

Section of Plant Physiology, Botanical Institute, University of Basel, Hebelstrasse 1, Basel, Switzerland.

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http://dx.doi.org/10.1007/s00018-010-0428-1DOI Listing
October 2010

Bacterial virulence effectors and their activities.

Curr Opin Plant Biol 2010 Aug 11;13(4):388-93. Epub 2010 May 11.

Botanical Institute, University of Basel, Section of Plant Physiology, Hebelstrasse 1, CH-4056 Basel, Switzerland.

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http://dx.doi.org/10.1016/j.pbi.2010.04.003DOI Listing
August 2010

Plant immunity: towards an integrated view of plant-pathogen interactions.

Nat Rev Genet 2010 Aug 29;11(8):539-48. Epub 2010 Jun 29.

Commonwealth Scientific and Industrial Research Organisation, Division of Plant Industry, GPO BOX 1600, Canberra, Australian Capital Territory 2601, Australia.

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http://dx.doi.org/10.1038/nrg2812DOI Listing
August 2010

The case for the defense: plants versus Pseudomonas syringae.

Microbes Infect 2010 Jun 7;12(6):428-37. Epub 2010 Mar 7.

The Sainsbury Laboratory, Colney, Norwich, NR4 7UH, United Kingdom.

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http://dx.doi.org/10.1016/j.micinf.2010.03.002DOI Listing
June 2010

The LysM receptor kinase CERK1 mediates bacterial perception in Arabidopsis.

Plant Signal Behav 2009 Jun 8;4(6):539-41. Epub 2009 Jun 8.

The Sainsbury Laboratory, Colney, Norwich, UK.

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http://dx.doi.org/10.4161/psb.4.6.8697DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2688306PMC
June 2009

Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.

J Proteomics 2009 Apr 24;72(3):439-51. Epub 2009 Feb 24.

The Sainsbury Laboratory, Norwich Research Park, Colney Lane, Norwich, United Kingdom.

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http://dx.doi.org/10.1016/j.jprot.2009.02.004DOI Listing
April 2009

Regulation of tomato Prf by Pto-like protein kinases.

Mol Plant Microbe Interact 2009 Apr;22(4):391-401

The Sainsbury Laboratory, Colney, Norwich, UK.

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http://dx.doi.org/10.1094/MPMI-22-4-0391DOI Listing
April 2009

AvrPtoB targets the LysM receptor kinase CERK1 to promote bacterial virulence on plants.

Curr Biol 2009 Mar 26;19(5):423-9. Epub 2009 Feb 26.

The Sainsbury Laboratory, Colney, Norwich NR4 7UH, UK.

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http://dx.doi.org/10.1016/j.cub.2009.01.054DOI Listing
March 2009

Effector proteins of the bacterial pathogen Pseudomonas syringae alter the extracellular proteome of the host plant, Arabidopsis thaliana.

Mol Cell Proteomics 2009 Jan 20;8(1):145-56. Epub 2008 Aug 20.

The Sainsbury Laboratory, Norwich Research Park, Colney Lane, Norwich NR4 7UH, United Kingdom.

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http://www.mcponline.org/lookup/doi/10.1074/mcp.M800043-MCP2
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http://dx.doi.org/10.1074/mcp.M800043-MCP200DOI Listing
January 2009

Plant immunity: AvrPto targets the frontline.

Curr Biol 2008 Mar;18(5):R218-20

The Sainsbury Laboratory, Colney Lane, Norwich NR4 7UH, UK.

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http://dx.doi.org/10.1016/j.cub.2008.01.016DOI Listing
March 2008

Genetic and molecular requirements for function of the Pto/Prf effector recognition complex in tomato and Nicotiana benthamiana.

Plant J 2007 Sep 17;51(6):978-90. Epub 2007 Jul 17.

The Sainsbury Laboratory, Norwich Research Park, Colney Lane, Norwich NR4 7UH, UK.

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http://dx.doi.org/10.1111/j.1365-313X.2007.03199.xDOI Listing
September 2007

The receptor-like kinase SERK3/BAK1 is a central regulator of innate immunity in plants.

Proc Natl Acad Sci U S A 2007 Jul 11;104(29):12217-22. Epub 2007 Jul 11.

Department of Biochemistry, University of Missouri, 540G Bond Life Sciences Center,1201 Rollins Road, Columbia, MO 65211, USA.

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http://dx.doi.org/10.1073/pnas.0705306104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1924592PMC
July 2007

Early events in the pathogenicity of Pseudomonas syringae on Nicotiana benthamiana.

Plant J 2007 Feb 8;49(4):607-18. Epub 2007 Jan 8.

The Sainsbury Laboratory, John Innes Centre, Colney Lane, Norwich NR4 7UH, UK.

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http://dx.doi.org/10.1111/j.1365-313X.2006.02981.xDOI Listing
February 2007

The Pto kinase of tomato, which regulates plant immunity, is repressed by its myristoylated N terminus.

J Biol Chem 2006 Sep 19;281(36):26578-86. Epub 2006 Jun 19.

Sainsbury Laboratory, John Innes Centre, Norwich Research Park, Colney Lane, Norwich NR4 7UH, United Kingdom.

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http://dx.doi.org/10.1074/jbc.M603197200DOI Listing
September 2006

Tomato Pto encodes a functional N-myristoylation motif that is required for signal transduction in Nicotiana benthamiana.

Plant J 2006 Jan;45(1):31-45

The Sainsbury Laboratory, John Innes Centre, Colney Lane, Norwich, NR4 7UH, UK.

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http://dx.doi.org/10.1111/j.1365-313X.2005.02590.xDOI Listing
January 2006

A patch of surface-exposed residues mediates negative regulation of immune signaling by tomato Pto kinase.

Plant Cell 2004 Oct 14;16(10):2809-21. Epub 2004 Sep 14.

Sainsbury Laboratory, Norwich Research Park, Norwich, Norfolk, NR4 7UH, United Kingdom.

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http://dx.doi.org/10.1105/tpc.104.024141DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC520973PMC
October 2004

Early signal transduction events in specific plant disease resistance.

Curr Opin Plant Biol 2003 Aug;6(4):300-6

The Sainsbury Laboratory, Norwich Research Park, Colney, NR4 7UH, Norwich, UK. john.

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http://dx.doi.org/10.1016/s1369-5266(03)00057-8DOI Listing
August 2003