John R Yates

John R Yates

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John R Yates

John R Yates

Publications by authors named "John R Yates"

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Amblyomma americanum serpin 41 (AAS41) inhibits inflammation by targeting chymase and chymotrypsin.

Int J Biol Macromol 2020 Aug 19;156:1007-1021. Epub 2020 Apr 19.

Department of Veterinary Pathobiology, College of Veterinary Medicine, Texas A&M University, College Station, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ijbiomac.2020.04.088DOI Listing
August 2020

The Journey Is the Reward, a Taoist Proverb: John B. Fenn Award for Distinguished Contribution in Mass Spectrometry Lecture.

Authors:
John R Yates

J Am Soc Mass Spectrom 2020 Jul 7;31(7):1327-1336. Epub 2020 May 7.

Departments of Molecular Medicine and Neurobiology, The Scripps Research Institute, 10550 North Torrey Pines Road, SR302B, LaJolla, California 92037, United States.

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http://dx.doi.org/10.1021/jasms.0c00073DOI Listing
July 2020

Expression of Amyloidogenic Transthyretin Drives Hepatic Proteostasis Remodeling in an Induced Pluripotent Stem Cell Model of Systemic Amyloid Disease.

Stem Cell Reports 2020 Jul 23. Epub 2020 Jul 23.

Center for Regenerative Medicine of Boston University and Boston Medical Center, 670 Albany Street, 2nd Floor, Boston, MA 02118, USA; Section of Hematology and Oncology, Department of Medicine, Boston University School of Medicine, Boston, MA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.stemcr.2020.07.003DOI Listing
July 2020

Biochemical analysis of protein arginylation.

Methods Enzymol 2019 1;626:89-113. Epub 2019 Aug 1.

University of Pennsylvania, Philadelphia, PA, United States. Electronic address:

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http://dx.doi.org/10.1016/bs.mie.2019.07.028DOI Listing
June 2020

Proteomics of Select Neglected Tropical Diseases.

Annu Rev Anal Chem (Palo Alto Calif) 2020 Jun 28;13(1):315-336. Epub 2020 Feb 28.

Department of Molecular Medicine and Neurobiology, The Scripps Research Institute, La Jolla, California 92037, USA; email:

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http://dx.doi.org/10.1146/annurev-anchem-091619-093003DOI Listing
June 2020

Human Influenza Virus Hemagglutinins Contain Conserved Oligomannose N-Linked Glycans Allowing Potent Neutralization by Lectins.

Cell Host Microbe 2020 05 15;27(5):725-735.e5. Epub 2020 Apr 15.

Department of Molecular Medicine, Scripps Research, La Jolla, CA 92037, USA; Department of Immunology & Microbiology, Scripps Research, La Jolla, CA 92037, USA. Electronic address:

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http://dx.doi.org/10.1016/j.chom.2020.03.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7158820PMC
May 2020

Impact of the Identification Strategy on the Reproducibility of the DDA and DIA Results.

J Proteome Res 2020 Jun 19. Epub 2020 Jun 19.

Department of Molecular Medicine & Neurobiology, The Scripps Research Institute, La Jolla, California 92037, United States.

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http://dx.doi.org/10.1021/acs.jproteome.0c00153DOI Listing
June 2020

Proteomics Profiling of KAIMRC1 in Comparison to MDA-MB231 and MCF-7.

Int J Mol Sci 2020 Jun 18;21(12). Epub 2020 Jun 18.

Medical Research Core Facility and Platforms (MRCFP), King Abdullah International Medical Research Center/King Saud bin Abdulaziz University for Health Sciences (KSAU-HS), King Abdulaziz Medical City (KAMC), NGHA, Riyadh 11426, Saudi Arabia.

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http://dx.doi.org/10.3390/ijms21124328DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7352455PMC
June 2020

Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.

Cell Rep 2020 May;31(7):107656

Department of Genetics, Stanford University, Stanford, CA 94305, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2020.107656DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7306178PMC
May 2020

Effects on Postoperative Gastrointestinal Motility After Neuromuscular Blockade Reversal With Sugammadex Versus Neostigmine/Glycopyrrolate in Colorectal Surgery Patients.

Ann Pharmacother 2020 May 29:1060028020929061. Epub 2020 May 29.

The University of Tennessee Medical Center, Knoxville, TN, USA.

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http://dx.doi.org/10.1177/1060028020929061DOI Listing
May 2020

HIV-1 Envelope and MPER Antibody Structures in Lipid Assemblies.

Cell Rep 2020 Apr;31(4):107583

Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, 92037, USA; International AIDS Vaccine Initiative Neutralizing Antibody Center, The Scripps Research Institute, La Jolla, CA 92037, USA; Center for HIV/AIDS Vaccine Development, The Scripps Research Institute, La Jolla, CA 92037, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2020.107583DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7196886PMC
April 2020

The KLDpT activation loop motif is critical for MARK kinase activity.

PLoS One 2019 3;14(12):e0225727. Epub 2019 Dec 3.

Clayton Foundation Laboratories for Peptide Biology, The Salk Institute for Biological Studies, La Jolla, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0225727PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6890249PMC
March 2020

Twelve Rules for Science (Yates Lab Version).

Authors:
John R Yates

J Proteome Res 2020 03 7;19(3):991-992. Epub 2020 Feb 7.

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http://dx.doi.org/10.1021/acs.jproteome.0c00040DOI Listing
March 2020

EThcD and 213 nm UVPD for Top-Down Analysis of Bovine Seminal Plasma Proteoforms on Electrophoretic and Chromatographic Time Frames.

Anal Chem 2020 02 29;92(4):2979-2987. Epub 2020 Jan 29.

The Scripps Research Institute , La Jolla , California 92037 , United States.

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http://dx.doi.org/10.1021/acs.analchem.9b03856DOI Listing
February 2020

Time-resolved proteomic profile of Amblyomma americanum tick saliva during feeding.

PLoS Negl Trop Dis 2020 02 12;14(2):e0007758. Epub 2020 Feb 12.

Department of Veterinary Pathobiology, College of Veterinary Medicine, Texas A&M University, College Station, Texas, United States of America.

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http://dx.doi.org/10.1371/journal.pntd.0007758DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7041860PMC
February 2020

Improving Proteomics Data Reproducibility with a Dual-Search Strategy.

Anal Chem 2020 01 9;92(2):1697-1701. Epub 2020 Jan 9.

Department of Molecular Medicine , The Scripps Research Institute , La Jolla , California 92037 , United States.

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http://dx.doi.org/10.1021/acs.analchem.9b04955DOI Listing
January 2020

Evolutionary Persistence of DNA Methylation for Millions of Years after Ancient Loss of a De Novo Methyltransferase.

Cell 2020 01 16;180(2):263-277.e20. Epub 2020 Jan 16.

Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA 94158, USA; Chan-Zuckerberg Biohub, San Francisco, CA 94158, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2019.12.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7197499PMC
January 2020

Tandem Mass Tag Proteomic Analysis of and Models of Cutaneous Leishmaniasis Reveals Parasite-Specific and Nonspecific Modulation of Proteins in the Host.

ACS Infect Dis 2019 12 24;5(12):2136-2147. Epub 2019 Oct 24.

Department of Chemical Physiology , The Scripps Research Institute , 10550 North Torrey Pines Road, SR302 , La Jolla , California 92037 , United States.

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http://dx.doi.org/10.1021/acsinfecdis.9b00275DOI Listing
December 2019