Joel Saltz

Joel Saltz

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Joel Saltz

Publications by authors named "Joel Saltz"

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Geographic, Temporal, and Sociodemographic Differences in Opioid Poisoning.

Am J Prev Med 2019 Aug 18;57(2):153-164. Epub 2019 Jun 18.

Department of Biomedical Informatics, Renaissance School of Medicine, Stony Brook University, Stony Brook, New York; Department of Computer Science, School of Engineering and Applied Sciences, Stony Brook University, Stony Brook, New York.

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http://dx.doi.org/10.1016/j.amepre.2019.03.020DOI Listing
August 2019

Multi-objective Parameter Auto-tuning for Tissue Image Segmentation Workflows.

J Digit Imaging 2019 Jun;32(3):521-533

Department of Computer Science, University of Brasília, Brasília, Brazil.

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http://dx.doi.org/10.1007/s10278-018-0138-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6499855PMC
June 2019

Sensitivity analysis in digital pathology: Handling large number of parameters with compute expensive workflows.

Comput Biol Med 2019 May 13;108:371-381. Epub 2019 Mar 13.

Department of Computer Science, University of Brasília, Brazil; Biomedical Informatics Department, Stony Brook University, Stony Brook, USA. Electronic address:

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http://dx.doi.org/10.1016/j.compbiomed.2019.03.006DOI Listing
May 2019

Large-scale Analysis of Opioid Poisoning Related Hospital Visits in New York State.

AMIA Annu Symp Proc 2017 16;2017:545-554. Epub 2018 Apr 16.

Stony Brook University, Stony Brook, NY.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5977648PMC
March 2019

Serverless OpenHealth at data commons scale-traversing the 20 million patient records of New York's SPARCS dataset in real-time.

PeerJ 2019 15;7:e6230. Epub 2019 Jan 15.

Radiology, State University of New York at Stony Brook, Stony Brook, NY, United States of America.

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http://dx.doi.org/10.7717/peerj.6230DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6338105PMC
January 2019

Social Media Based Analysis of Opioid Epidemic Using Reddit.

AMIA Annu Symp Proc 2018 5;2018:867-876. Epub 2018 Dec 5.

Stony Brook University, Stony Brook, NY.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371364PMC
December 2018

Mobile health applications in cardiovascular research.

Int J Cardiol 2018 Oct 12;269:265-271. Epub 2018 Jun 12.

Cardiology Division, Stony Brook University, Stony Brook, New York, United States. Electronic address:

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http://dx.doi.org/10.1016/j.ijcard.2018.06.039DOI Listing
October 2018

Cooperative and out-of-core execution of the irregular wavefront propagation pattern on hybrid machines with Intel Xeon Phi™.

Concurr Comput 2018 Jul 24;30(14). Epub 2018 Jan 24.

Department of Computer Science, University of Brasília, Brasília-DF, Brazil.

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http://dx.doi.org/10.1002/cpe.4425DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6195363PMC
July 2018

PanCancer insights from The Cancer Genome Atlas: the pathologist's perspective.

J Pathol 2018 04 22;244(5):512-524. Epub 2018 Feb 22.

Departments of Pathology, Genomic Medicine, and Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.

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http://dx.doi.org/10.1002/path.5028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6240356PMC
April 2018

SparkGIS: Resource Aware Efficient In-Memory Spatial Query Processing.

Proc ACM SIGSPATIAL Int Conf Adv Inf 2017 Nov;2017

Stony Brook University.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6054321PMC
November 2017

A Methodology for Texture Feature-based Quality Assessment in Nucleus Segmentation of Histopathology Image.

J Pathol Inform 2017 7;8:38. Epub 2017 Sep 7.

Department of Applied Mathematics and Statistics, State University of New York at Stony Brook, Stony Brook, NY, USA.

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http://dx.doi.org/10.4103/jpi.jpi_43_17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5609357PMC
September 2017

Parallel and Efficient Sensitivity Analysis of Microscopy Image Segmentation Workflows in Hybrid Systems.

Proc IEEE Int Conf Clust Comput 2017 Sep 26;2017:25-35. Epub 2017 Sep 26.

Department of Biomedical Informatics, Stony Brook University, Stony Brook, NY, USA.

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http://ieeexplore.ieee.org/document/8048914/
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http://dx.doi.org/10.1109/CLUSTER.2017.28DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5658136PMC
September 2017

Classification of Pancreatic Cysts in Computed Tomography Images Using a Random Forest and Convolutional Neural Network Ensemble.

Med Image Comput Comput Assist Interv 2017 Sep 4;10435:150-158. Epub 2017 Sep 4.

Department of Biomedical Informatics, Stony Brook University, Stony Brook, NY, USA.

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http://dx.doi.org/10.1007/978-3-319-66179-7_18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5987215PMC
September 2017

Safe "cloudification" of large images through picker APIs.

AMIA Annu Symp Proc 2016 10;2016:342-351. Epub 2017 Feb 10.

Dept Biomedical Informatics, Stony Brook University (SUNY), NY 11794.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5333212PMC
July 2017

Development of a Framework for Large Scale Three-Dimensional Pathology and Biomarker Imaging and Spatial Analytics.

AMIA Jt Summits Transl Sci Proc 2017 26;2017:75-84. Epub 2017 Jul 26.

Department of Biomedical Informatics, Emory University, Atlanta, GA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543358PMC
July 2017

Towards Generation, Management, and Exploration of Combined Radiomics and Pathomics Datasets for Cancer Research.

AMIA Jt Summits Transl Sci Proc 2017 26;2017:85-94. Epub 2017 Jul 26.

Biomedical Informatics Department, Stony Brook University, Stony Brook, NY.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543366PMC
July 2017

Spatio-temporal Analysis for New York State SPARCS Data.

AMIA Jt Summits Transl Sci Proc 2017 26;2017:483-492. Epub 2017 Jul 26.

Stony Brook University, Stony Brook, NY.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5543354PMC
July 2017

Algorithm sensitivity analysis and parameter tuning for tissue image segmentation pipelines.

Bioinformatics 2017 04;33(7):1064-1072

Biomedical Informatics Department, Stony Brook University, Stony Brook, NY 11794-8322, USA.

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http://dx.doi.org/10.1093/bioinformatics/btw749DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5409344PMC
April 2017

ConvNets with Smooth Adaptive Activation Functions for Regression.

Proc Mach Learn Res 2017 Apr;54:430-439

Stony Brook University.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6521876PMC
April 2017

Center-Focusing Multi-task CNN with Injected Features for Classification of Glioma Nuclear Images.

IEEE Winter Conf Appl Comput Vis 2017 Mar 15;2017:834-841. Epub 2017 May 15.

Stony Brook University, Stony Brook University Hospital.

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http://dx.doi.org/10.1109/WACV.2017.98DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5988234PMC
March 2017

OpenHealth Platform for Interactive Contextualization of Population Health Open Data.

AMIA Annu Symp Proc 2015;2015:297-305. Epub 2015 Nov 5.

Dept Biomedical Informatics, Stony Brook University, State University of New York.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765591PMC
February 2017

Evaluation of nucleus segmentation in digital pathology images through large scale image synthesis.

Proc SPIE Int Soc Opt Eng 2017 Feb 1;10140. Epub 2017 Mar 1.

Department of Biomedical Informatics, Stony Brook University.

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http://dx.doi.org/10.1117/12.2254220DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6195367PMC
February 2017

Application Performance Analysis and Efficient Execution on Systems with multi-core CPUs, GPUs and MICs: A Case Study with Microscopy Image Analysis.

Int J High Perform Comput Appl 2017 Jan 27;31(1):32-51. Epub 2015 Jul 27.

Department of Biomedical Informatics, Stony Brook University, Stony Brook, NY, USA; Scientific Data Group, Oak Ridge National Laboratory, Oak Ridge, TN, USA.

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http://dx.doi.org/10.1177/1094342015594519DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5319667PMC
January 2017

Patch-based Convolutional Neural Network for Whole Slide Tissue Image Classification.

Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit 2016 Jun-Jul;2016:2424-2433

Dept. of Computer Science, Stony Brook University; Dept. of Biomedical Informatics, Stony Brook University; Dept. of Pathology, Stony Brook Hospital; Cancer Center, Stony Brook Hospital.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5085270PMC
http://dx.doi.org/10.1109/CVPR.2016.266DOI Listing
November 2016

SparkGIS: Efficient Comparison and Evaluation of Algorithm Results in Tissue Image Analysis Studies.

Biomed Data Manag Graph Online Querying (2015) 2016 24;9579:134-146. Epub 2016 Jun 24.

Department of Biomedical Informatics, Stony Brook University, New York, USA.

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http://dx.doi.org/10.1007/978-3-319-41576-5_10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6126541PMC
June 2016

Hierarchical nucleus segmentation in digital pathology images.

Proc SPIE Int Soc Opt Eng 2016 Feb 23;9791. Epub 2016 Mar 23.

Department of Biomedical Informatics, Stony Brook University, NY, U.S.A; Department of Computer Science, Stony Brook University, NY, U.S.A.

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http://dx.doi.org/10.1117/12.2217029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4927003PMC
February 2016

Multi-scale learning based segmentation of glands in digital colonrectal pathology images.

Proc SPIE Int Soc Opt Eng 2016 Feb 23;9791. Epub 2016 Mar 23.

Department of Applied Mathematics & Statistics, Stony Brook University, NY, U.S.A; Department of Computer Science, Stony Brook University, NY, U.S.A; Department of Biomedical Informatics, Stony Brook University, NY, U.S.A.

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http://dx.doi.org/10.1117/12.2216790DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5091801PMC
February 2016

Computational Pathology: A Path Ahead.

Arch Pathol Lab Med 2016 Jan 22;140(1):41-50. Epub 2015 Jun 22.

From the Department of Pathology, Massachusetts General Hospital and Harvard Medical School, Boston (Drs Louis, Dighe, and Gilbertson); the Department of Pathology and Laboratory Medicine, Perelman School of Medicine at the University of Pennsylvania, Philadelphia (Dr Feldman); the Department of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia (Dr Carter); the Department of Pathology and Immunology, Washington University School of Medicine, St Louis, Missouri (Dr Pfeifer); the Department of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts (Drs Bry, Gerber, and Golden); the Department of Biomedical Informatics, Stony Brook University, Stony Brook, New York (Drs Almeida and Saltz); the Department of Pathology and Laboratory Medicine, David Geffen School of Medicine, University of California, Los Angeles (Dr Braun); the Department of Pathology and Anatomical Science, State University of New York at Buffalo (Dr Tomaszewski); the Department of Pathology, Yale Medical School, New Haven, Connecticut (Dr Sinard); the Department of Pathology and Laboratory Medicine, Stanford University, Palo Alto, California (Dr Galli); and the Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania (Dr Becich).

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http://dx.doi.org/10.5858/arpa.2015-0093-SADOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4996078PMC
January 2016

GlycoPattern: a web platform for glycan array mining.

Bioinformatics 2014 Dec 20;30(23):3417-8. Epub 2014 Aug 20.

National Center For Functional Glycomics, Emory University School of Medicine, Atlanta, GA 30322, USA, Department of Mathematics and Computer Science, Emory University, Atlanta, GA 30322 and Department of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11794, USA.

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http://dx.doi.org/10.1093/bioinformatics/btu559DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4296152PMC
December 2014

Machine-based morphologic analysis of glioblastoma using whole-slide pathology images uncovers clinically relevant molecular correlates.

PLoS One 2013 13;8(11):e81049. Epub 2013 Nov 13.

Center for Comprehensive Informatics, Emory University, Atlanta, Georgia, United States of America ; Department of Biomedical Informatics, Emory University, Atlanta, Georgia, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0081049PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3827469PMC
July 2014

Temporal abstraction-based clinical phenotyping with Eureka!

AMIA Annu Symp Proc 2013 16;2013:1160-9. Epub 2013 Nov 16.

Dept. of Biomedical Informatics, Emory University, Atlanta, GA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3900137PMC
May 2014

Comparative Performance Analysis of Intel Xeon Phi, GPU, and CPU: A Case Study from Microscopy Image Analysis.

IEEE Trans Parallel Distrib Syst 2014 May;2014:1063-1072

Department of Biomedical Informatics, Stony Brook University, Stony Brook, NY, USA.

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http://dx.doi.org/10.1109/IPDPS.2014.111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4240026PMC
May 2014

Parallel content-based sub-image retrieval using hierarchical searching.

Bioinformatics 2014 Apr 9;30(7):996-1002. Epub 2013 Nov 9.

Division of Biomedical Informatics, Department of Biostatistics and Department of Computer Science, University of Kentucky, Lexington, KY, Center for Biomedical Imaging and Informatics, The Cancer Institute of New Jersey, Rutgers University, New Brunswick, NJ, Center for Comprehensive Informatics, Emory University, Atlanta, GA and Department of Biomedical Informatics, School of Medicine, Emory University, Atlanta, GA, USA.

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http://dx.doi.org/10.1093/bioinformatics/btt623DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3967099PMC
April 2014

A national strategy to develop pragmatic clinical trials infrastructure.

Clin Transl Sci 2014 Apr 28;7(2):164-71. Epub 2014 Jan 28.

The RAND Corporation, Boston, Massachusetts, USA; Tufts University, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1111/cts.12143DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4126802PMC
April 2014

Cancer Digital Slide Archive: an informatics resource to support integrated in silico analysis of TCGA pathology data.

J Am Med Inform Assoc 2013 Nov-Dec;20(6):1091-8. Epub 2013 Jul 25.

Department of Biomedical Informatics, Emory University School of Medicine, Atlanta, Georgia, USA.

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http://dx.doi.org/10.1136/amiajnl-2012-001469DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3822112PMC
December 2013

Redactable and auditable data access for bioinformatics research.

AMIA Jt Summits Transl Sci Proc 2013 18;2013:21-5. Epub 2013 Mar 18.

School of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, GA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3845775PMC
December 2013

Semantic ETL into i2b2 with Eureka!

AMIA Jt Summits Transl Sci Proc 2013 18;2013:203-7. Epub 2013 Mar 18.

Center for Comprehensive Informatics, Emory University, Atlanta, GA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3845783PMC
December 2013

Tumor-infiltrating lymphocytes in glioblastoma are associated with specific genomic alterations and related to transcriptional class.

Clin Cancer Res 2013 Sep 17;19(18):4951-60. Epub 2013 Jul 17.

Authors' Affiliations: Emory University School of Medicine, Departments of Biomedical Informatics and Pathology and Laboratory Medicine,Center for Comprehensive Informatics, Winship Cancer Institute, Emory University; Department of Pathology, Children's Healthcare of Atlanta, Atlanta, Georgia; Department of Neurosurgery, Henry Ford Hospital, Detroit, Michigan; Department of Pathology, Case Western Reserve University, Cleveland, Ohio; Department of Pathology, University of Texas MD Anderson Cancer Center, Houston, Texas; Department of Pathology, Duke University Medical Center, Durham, North Carolina; Department of Pathology, Ohio State University, Columbus, Ohio; Department of Pathology, University of North Carolina, Chapel Hill, North Carolina; and Department of Neurosurgery, Memorial Sloan Kettering Cancer Center, New York, New York.

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http://dx.doi.org/10.1158/1078-0432.CCR-13-0551DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3865611PMC
September 2013

Semantically Interoperable XML Data.

Int J Semant Comput 2013 Sep;7(3):237-255

Center for Comprehensive Informatics, Department of Biomedical Informatics, Emory University, Atlanta, Georgia, USA.

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http://dx.doi.org/10.1142/S1793351X13500037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4185431PMC
September 2013

Feature-based Analysis of Large-scale Spatio-Temporal Sensor Data on Hybrid Architectures.

Int J High Perform Comput Appl 2013 Aug 9;27(3):263-272. Epub 2013 Jun 9.

Center for Comprehensive Informatics and Biomedical Informatics Department Emory University.

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http://dx.doi.org/10.1177/1094342013488260DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5423684PMC
August 2013

Hadoop-GIS: A High Performance Spatial Data Warehousing System over MapReduce.

Proceedings VLDB Endowment 2013 Aug;6(11)

Department of Mathematics and Computer Science, Emory University.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3814183PMC
August 2013

Leveraging derived data elements in data analytic models for understanding and predicting hospital readmissions.

AMIA Annu Symp Proc 2012 3;2012:103-11. Epub 2012 Nov 3.

Department of Biomedical Informatics, Emory University, Atlanta, GA, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3540449PMC
July 2013

ZPEG: a hybrid DPCM-DCT based approach for compression of Z-stack images.

Conf Proc IEEE Eng Med Biol Soc 2012 ;2012:5424-7

School of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA.

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http://dx.doi.org/10.1109/EMBC.2012.6347221DOI Listing
July 2013

The Analytic Information Warehouse (AIW): a platform for analytics using electronic health record data.

J Biomed Inform 2013 Jun 9;46(3):410-24. Epub 2013 Feb 9.

Department of Biomedical Informatics, Emory University, 36 Eagle Row, Atlanta, GA 30322, USA.

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http://dx.doi.org/10.1016/j.jbi.2013.01.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3660520PMC
June 2013

Liver steatosis assessment: correlations among pathology, radiology, clinical data and automated image analysis software.

Pathol Res Pract 2013 Jun 17;209(6):371-9. Epub 2013 Apr 17.

Department of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, GA, United States.

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http://dx.doi.org/10.1016/j.prp.2013.04.001DOI Listing
June 2013

A high-performance spatial database based approach for pathology imaging algorithm evaluation.

J Pathol Inform 2013 14;4. Epub 2013 Mar 14.

Department of Biomedical Informatics, Emory University, USA ; Center for Comprehensive Informatics, Emory University, USA.

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http://dx.doi.org/10.4103/2153-3539.108543DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3624706PMC
April 2013

Efficient Irregular Wavefront Propagation Algorithms on Hybrid CPU-GPU Machines.

Parallel Comput 2013 Apr;39(4-5):189-211

Center for Comprehensive Informatics and Biomedical Informatics Department, Emory University, Atlanta, GA 30322.

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https://linkinghub.elsevier.com/retrieve/pii/S01678191130003
Publisher Site
http://dx.doi.org/10.1016/j.parco.2013.03.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3727669PMC
April 2013

Towards Building a High Performance Spatial Query System for Large Scale Medical Imaging Data.

Proc ACM SIGSPATIAL Int Conf Adv Inf 2012 Nov;2012:309-318

Center for Comprehensive Informatics, Emory University.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3909999PMC
November 2012

Automated motif discovery from glycan array data.

OMICS 2012 Oct 9;16(10):497-512. Epub 2012 Aug 9.

Center for Comprehensive Informatics, Emory University, Atlanta, Georgia, USA.

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http://dx.doi.org/10.1089/omi.2012.0013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3459425PMC
October 2012

An informatics framework for testing data integrity and correctness of federated biomedical databases.

AMIA Jt Summits Transl Sci Proc 2011 7;2011:22-6. Epub 2011 Mar 7.

College of Computing, Georgia Institute of Technology, Atlanta, GA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3248750PMC
August 2012

A Temporal Abstraction-based Extract, Transform and Load Process for Creating Registry Databases for Research.

AMIA Jt Summits Transl Sci Proc 2011 7;2011:46-50. Epub 2011 Mar 7.

Atlanta Clinical and Translational Science Institute Biomedical Informatics Program, Atlanta, GA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3248751PMC
August 2012

Towards building computerized image analysis framework for nucleus discrimination in microscopy images of diffuse glioma.

Conf Proc IEEE Eng Med Biol Soc 2011 ;2011:6605-8

Emory University, Center for Comprehensive Informatics, Atlanta, GA 30322, USA.

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http://dx.doi.org/10.1109/IEMBS.2011.6091629DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3291893PMC
August 2012

Accelerating Pathology Image Data Cross-Comparison on CPU-GPU Hybrid Systems.

Proceedings VLDB Endowment 2012 Jul;5(11):1543-1554

Department of Computer Science and Engineering, The Ohio State University.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3553551PMC
July 2012

Managing and Querying Whole Slide Images.

Proc SPIE Int Soc Opt Eng 2012 Feb;8319

Center for Comprehensive Informatics, Emory University, Atlanta, Georgia, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3405921PMC
February 2012

Detection of Conflicts and Inconsistencies in Taxonomy-based Authorization Policies.

Proceedings (IEEE Int Conf Bioinformatics Biomed) 2012 Jan 12;2011:590-594. Epub 2011 Nov 12.

School of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, GA, USA.

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http://dx.doi.org/10.1109/BIBM.2011.79DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3520489PMC
January 2012

Enabling Ontology Based Semantic Queries in Biomedical Database Systems.

Proc ACM Int Conf Inf Knowl Manag 2012 :2651-2654

Mathematics and Computer Science Department, Emory University, Atlanta, Georgia, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3567445PMC
January 2012

ImageMiner: a software system for comparative analysis of tissue microarrays using content-based image retrieval, high-performance computing, and grid technology.

J Am Med Inform Assoc 2011 Jul-Aug;18(4):403-15. Epub 2011 May 23.

Center for Biomedical Imaging & Informatics, UMDNJ-Robert Wood Johnson Medical School, New Brunswick, New Jersey 08901, USA.

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http://dx.doi.org/10.1136/amiajnl-2011-000170DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3128405PMC
November 2011

Acceleration of Two Point Correlation Function Calculation for Pathology Image Segmentation.

Proc IEEE Int Conf Healthc Inform Imaging Syst Biol 2011 Jul 27;2011:174-181. Epub 2011 Oct 27.

Department of Biomedical Informatics, The Ohio State University, Columbus, OH.

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http://dx.doi.org/10.1109/HISB.2011.10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6042293PMC
July 2011

MORPHOLOGICAL SIGNATURES AND GENOMIC CORRELATES IN GLIOBLASTOMA.

Proc IEEE Int Symp Biomed Imaging 2011 Mar:1624-1627

Center for Comprehensive Informatics, Emory University, Atlanta, GA 30322.

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http://dx.doi.org/10.1109/ISBI.2011.5872714DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3241612PMC
March 2011

Towards Building High Performance Medical Image Management System for Clinical Trials.

Proc SPIE Int Soc Opt Eng 2011 ;7967(79670C)

Center for Comprehensive Informatics, Emory University, Atlanta, Georgia, USA.

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http://dx.doi.org/10.1117/12.877838DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098745PMC
January 2011

HIV-K: an integrative knowledge base for semantic integration of AIDS-related malignancy data and treatment outcomes.

Stud Health Technol Inform 2010 ;159:239-43

Center for Comprehensive Informatics, Emory University, Atlanta, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3157699PMC
October 2010

A new model-based estimation of ellipses for object representation.

Conf Proc IEEE Eng Med Biol Soc 2009 ;2009:3637-40

Emory University, Center for Comprehensive Informatics, Atlanta, GA 30322, USA.

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http://dx.doi.org/10.1109/IEMBS.2009.5333149DOI Listing
April 2010

Two-Point Correlation as a Feature for Histology Images: Feature Space Structure and Correlation Updating.

Conf Comput Vis Pattern Recognit Workshops 2010 :79-86

Center for Comprehensive Informatics Emory University Atlanta, GA 30322.

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http://dx.doi.org/10.1109/CVPRW.2010.5543453DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3803159PMC
January 2010

Managing and Querying Image Annotation and Markup in XML.

Proc SPIE Int Soc Opt Eng 2010 Jan;7628(2010):762805

Center for Comprehensive Informatics, Emory University, Atlanta, Georgia, USA.

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http://dx.doi.org/10.1117/12.843606DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3015142PMC
January 2010

Stroma classification for neuroblastoma on graphics processors.

Int J Data Min Bioinform 2009 ;3(3):280-98

Computer Architecture Department, University of Málaga, Málaga, Spain.

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August 2009

A caGRID-ENABLED, LEARNING BASED IMAGE SEGMENTATION METHOD FOR HISTOPATHOLOGY SPECIMENS.

Proc IEEE Int Symp Biomed Imaging 2009 Jul;6:1306-1309

The Cancer Institute of New Jersey, UMDNJ-RWJMS, Piscataway, NJ 08854.

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http://dx.doi.org/10.1109/ISBI.2009.5193304DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2779045PMC
July 2009