Joel A Malek

Joel A Malek

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Joel A Malek

Joel A Malek

Publications by authors named "Joel A Malek"

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Alterations in long noncoding RNAs in women with and without polycystic ovarian syndrome.

Clin Endocrinol (Oxf) 2019 Sep 4. Epub 2019 Sep 4.

Weill Cornell Medicine-Qatar, Education City, Doha, Qatar.

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http://dx.doi.org/10.1111/cen.14087DOI Listing
September 2019

Identification of human genetic variants controlling circular RNA expression.

RNA 2019 Sep 13. Epub 2019 Sep 13.

Weill Cornell Medicine - Qatar.

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http://dx.doi.org/10.1261/rna.071654.119DOI Listing
September 2019

High-resolution protein-protein interaction mapping using all--all sequencing (AVA-Seq).

J Biol Chem 2019 Jul 10;294(30):11549-11558. Epub 2019 Jun 10.

Department of Genetic Medicine, Weill Cornell Medicine in Qatar, Doha 24144, Qatar

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http://dx.doi.org/10.1074/jbc.RA119.008792DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6663860PMC
July 2019

Cell Type-Specific TGF-β Mediated EMT in 3D and 2D Models and Its Reversal by TGF-β Receptor Kinase Inhibitor in Ovarian Cancer Cell Lines.

Int J Mol Sci 2019 Jul 22;20(14). Epub 2019 Jul 22.

Department of Genetic Medicine, Weill Cornell Medicine-Qatar, Education City, Qatar Foundation, Doha P.O. Box No. 24144, Qatar.

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http://dx.doi.org/10.3390/ijms20143568DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6678358PMC
July 2019

Point-of-care whole-exome sequencing of idiopathic male infertility.

Genet Med 2018 11 12;20(11):1365-1373. Epub 2018 Apr 12.

Department of Genetic Medicine, Weill Cornell Medical College, New York, New York, USA.

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http://dx.doi.org/10.1038/gim.2018.10DOI Listing
November 2018

A Genome-Wide Survey of Date Palm Cultivars Supports Two Major Subpopulations in Phoenix dactylifera.

G3 (Bethesda) 2015 May 8;5(7):1429-38. Epub 2015 May 8.

Genomics Laboratory, Weill Cornell Medical College in Qatar, Qatar Foundation, 24144 Doha, Qatar Department of Genetic Medicine, Weill Cornell Medical College in Qatar, Qatar Foundation, 24144 Doha, Qatar Weill Cornell Medical College in Qatar, Qatar Foundation, 24144 Doha, Qatar

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http://dx.doi.org/10.1534/g3.115.018341DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4502377PMC
May 2015

K-core decomposition of a protein domain co-occurrence network reveals lower cancer mutation rates for interior cores.

J Clin Bioinforma 2015 3;5. Epub 2015 Mar 3.

Department of Genetic Medicine, Weill Cornell Medical College, New York, NY USA ; Genomic Core, Weill Cornell Medical College in Qatar, Qatar Foundation, Doha, 24144 Qatar.

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http://dx.doi.org/10.1186/s13336-015-0016-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4357223PMC
March 2015

Longitudinal study of recurrent metastatic melanoma cell lines underscores the individuality of cancer biology.

J Invest Dermatol 2014 May 22;134(5):1389-1396. Epub 2013 Nov 22.

Infectious Disease and Immunogenetics Section, Department of Transfusion Medicine, Clinical Center, National Institutes of Health, Bethesda, Maryland, USA; Research Branch, Sidra Medical and Research Centre, Doha, Qatar. Electronic address:

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http://dx.doi.org/10.1038/jid.2013.495DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3989423PMC
May 2014

Mesenchymal cell interaction with ovarian cancer cells induces a background dependent pro-metastatic transcriptomic profile.

J Transl Med 2014 Mar 5;12:59. Epub 2014 Mar 5.

Department of Genetic Medicine and Obstetrics and Gynecology, Stem cell and microenvironment laboratory, Weill Cornell Medical College in Qatar (WCMC-Q), Education City, Qatar Foundation, Qatar-Foundation PO: 24144, Doha, Qatar.

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http://dx.doi.org/10.1186/1479-5876-12-59DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4132214PMC
March 2014

Mesenchymal cell interaction with ovarian cancer cells triggers pro-metastatic properties.

PLoS One 2012 30;7(5):e38340. Epub 2012 May 30.

Stem Cell and Microenvironment Laboratory, Weill Cornell Medical College in Qatar, Education City, Qatar Foundation, Doha, Qatar.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0038340PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3364218PMC
October 2012

High-prevalence and broad spectrum of Cell Adhesion and Extracellular Matrix gene pathway mutations in epithelial ovarian cancer.

J Clin Bioinforma 2012 Sep 24;2(1):15. Epub 2012 Sep 24.

Department of Genetic Medicine, Weill Cornell Medical College, NY, NY, USA.

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http://dx.doi.org/10.1186/2043-9113-2-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3492115PMC
September 2012

Gene expression analysis of matched ovarian primary tumors and peritoneal metastasis.

J Transl Med 2012 Jun 11;10:121. Epub 2012 Jun 11.

Genomics Core, Weill Cornell Medical College in Qatar, Education city, Qatar Foundation, Doha, Qatar PO 241 44.

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http://dx.doi.org/10.1186/1479-5876-10-121DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3477065PMC
June 2012

DNA-based assays to distinguish date palm (Arecaceae) gender.

Am J Bot 2012 Jan 27;99(1):e7-10. Epub 2011 Dec 27.

Genomics Core, Weill Cornell Medical College in Qatar, Doha, Qatar.

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http://dx.doi.org/10.3732/ajb.1100425DOI Listing
January 2012

Protein interaction mapping on a functional shotgun sequence of Rickettsia sibirica.

Nucleic Acids Res 2004 10;32(3):1059-64. Epub 2004 Feb 10.

Agencourt Bioscience Corporation, 100 Cummings Center Suite 107G, Beverly, MA 01915, USA.

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http://dx.doi.org/10.1093/nar/gkh254DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC373392PMC
May 2004

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.

Proc Natl Acad Sci U S A 2002 Dec 11;99(26):16899-903. Epub 2002 Dec 11.

National Cancer Institute, Bethessda, MD 20892-2580, USA.

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http://dx.doi.org/10.1073/pnas.242603899DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC139241PMC
December 2002

The genome sequence of the malaria mosquito Anopheles gambiae.

Authors:
Robert A Holt G Mani Subramanian Aaron Halpern Granger G Sutton Rosane Charlab Deborah R Nusskern Patrick Wincker Andrew G Clark José M C Ribeiro Ron Wides Steven L Salzberg Brendan Loftus Mark Yandell William H Majoros Douglas B Rusch Zhongwu Lai Cheryl L Kraft Josep F Abril Veronique Anthouard Peter Arensburger Peter W Atkinson Holly Baden Veronique de Berardinis Danita Baldwin Vladimir Benes Jim Biedler Claudia Blass Randall Bolanos Didier Boscus Mary Barnstead Shuang Cai Angela Center Kabir Chaturverdi George K Christophides Mathew A Chrystal Michele Clamp Anibal Cravchik Val Curwen Ali Dana Art Delcher Ian Dew Cheryl A Evans Michael Flanigan Anne Grundschober-Freimoser Lisa Friedli Zhiping Gu Ping Guan Roderic Guigo Maureen E Hillenmeyer Susanne L Hladun James R Hogan Young S Hong Jeffrey Hoover Olivier Jaillon Zhaoxi Ke Chinnappa Kodira Elena Kokoza Anastasios Koutsos Ivica Letunic Alex Levitsky Yong Liang Jhy-Jhu Lin Neil F Lobo John R Lopez Joel A Malek Tina C McIntosh Stephan Meister Jason Miller Clark Mobarry Emmanuel Mongin Sean D Murphy David A O'Brochta Cynthia Pfannkoch Rong Qi Megan A Regier Karin Remington Hongguang Shao Maria V Sharakhova Cynthia D Sitter Jyoti Shetty Thomas J Smith Renee Strong Jingtao Sun Dana Thomasova Lucas Q Ton Pantelis Topalis Zhijian Tu Maria F Unger Brian Walenz Aihui Wang Jian Wang Mei Wang Xuelan Wang Kerry J Woodford Jennifer R Wortman Martin Wu Alison Yao Evgeny M Zdobnov Hongyu Zhang Qi Zhao Shaying Zhao Shiaoping C Zhu Igor Zhimulev Mario Coluzzi Alessandra della Torre Charles W Roth Christos Louis Francis Kalush Richard J Mural Eugene W Myers Mark D Adams Hamilton O Smith Samuel Broder Malcolm J Gardner Claire M Fraser Ewan Birney Peer Bork Paul T Brey J Craig Venter Jean Weissenbach Fotis C Kafatos Frank H Collins Stephen L Hoffman

Science 2002 Oct;298(5591):129-49

Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA.

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http://ccb.jhu.edu/people/salzberg/docs/Anopheles-gambiae-re
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http://www.sciencemag.org/cgi/doi/10.1126/science.1076181
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http://dx.doi.org/10.1126/science.1076181DOI Listing
October 2002

A physical map of the mouse genome.

Nature 2002 Aug 4;418(6899):743-50. Epub 2002 Aug 4.

The Wellcome Trust Sanger Institute, Hinxton, Cambridge CB10 1SA, UK.

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http://dx.doi.org/10.1038/nature00957DOI Listing
August 2002