Jodie L Abrahams

Jodie L Abrahams

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Jodie L Abrahams

Jodie L Abrahams

Publications by authors named "Jodie L Abrahams"

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Recent advances in glycoinformatic platforms for glycomics and glycoproteomics.

Curr Opin Struct Biol 2019 Dec 20;62:56-69. Epub 2019 Dec 20.

Institute for Glycomics, Griffith University, Gold Coast, QLD, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.sbi.2019.11.009DOI Listing
December 2019

Building a PGC-LC-MS N-glycan retention library and elution mapping resource.

Glycoconj J 2018 02 13;35(1):15-29. Epub 2017 Sep 13.

Department of Chemistry and Biomolecular Sciences, Faculty of Science & Engineering, Macquarie University, North Ryde, Sydney, NSW, 2109, Australia.

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http://dx.doi.org/10.1007/s10719-017-9793-4DOI Listing
February 2018

Databases and Associated Tools for Glycomics and Glycoproteomics.

Methods Mol Biol 2017 ;1503:235-264

Department of Medical Biochemistry and Cell Biology, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, Box 440, 405 30, Gothenburg, Sweden.

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http://dx.doi.org/10.1007/978-1-4939-6493-2_18DOI Listing
January 2018

Enhancing structural characterisation of glucuronidated O-linked glycans using negative mode ion trap higher energy collision-induced dissociation mass spectrometry.

Rapid Commun Mass Spectrom 2017 May;31(10):851-858

Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, NSW, 2109, Australia.

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http://dx.doi.org/10.1002/rcm.7851DOI Listing
May 2017

Comprehensive analysis of the N-glycan biosynthetic pathway using bioinformatics to generate UniCorn: A theoretical N-glycan structure database.

Carbohydr Res 2016 Aug 30;431:56-63. Epub 2016 May 30.

Department of Chemistry and Biomolecular Sciences, Faculty of Science & Engineering, Macquarie University, Balaclava Road, North Ryde, NSW, 2109, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.carres.2016.05.012DOI Listing
August 2016

Fragmentation and ion mobility properties of negative ions from N-linked carbohydrates: Part 7. Reduced glycans.

Rapid Commun Mass Spectrom 2016 Mar;30(5):627-34

Department of Chemistry and Biomolecular Sciences, Macquarie University, NSW 2109, Australia.

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http://dx.doi.org/10.1002/rcm.7467DOI Listing
March 2016

GlycoDigest: a tool for the targeted use of exoglycosidase digestions in glycan structure determination.

Bioinformatics 2014 Nov 10;30(21):3131-3. Epub 2014 Jul 10.

Proteome Informatics Group, Swiss Institute of Bioinformatics, 1211 Geneva, Switzerland, Biomolecular Frontiers Research Centre, Macquarie University, North Ryde, NSW 2109, Australia, National Institute for Bioprocessing Research and Training, GlycoScience Group, Dublin, Ireland, Department of Medical Biochemistry and Cell Biology, University of Gothenburg, 40530 Gothenburg, Sweden and Section of Biology, University of Geneva, 1211 Geneva, Switzerland Proteome Informatics Group, Swiss Institute of Bioinformatics, 1211 Geneva, Switzerland, Biomolecular Frontiers Research Centre, Macquarie University, North Ryde, NSW 2109, Australia, National Institute for Bioprocessing Research and Training, GlycoScience Group, Dublin, Ireland, Department of Medical Biochemistry and Cell Biology, University of Gothenburg, 40530 Gothenburg, Sweden and Section of Biology, University of Geneva, 1211 Geneva, Switzerland.

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http://dx.doi.org/10.1093/bioinformatics/btu425DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4609004PMC
November 2014

Cell surface protein glycosylation in cancer.

Proteomics 2014 Mar;14(4-5):525-46

Department of Chemistry and Biomolecular Sciences, Faculty of Science, Biomolecular Frontiers Research Centre, Macquarie University, Sydney, Australia.

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http://doi.wiley.com/10.1002/pmic.201300387
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http://dx.doi.org/10.1002/pmic.201300387DOI Listing
March 2014

Glycosylation status of serum in inflammatory arthritis in response to anti-TNF treatment.

Rheumatology (Oxford) 2013 Sep 16;52(9):1572-82. Epub 2013 May 16.

Department of Rheumatology, Dublin Academic Medical Centre, Dublin 4, Ireland.

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http://dx.doi.org/10.1093/rheumatology/ket189DOI Listing
September 2013

Structural feature ions for distinguishing N- and O-linked glycan isomers by LC-ESI-IT MS/MS.

J Am Soc Mass Spectrom 2013 Jun 20;24(6):895-906. Epub 2013 Apr 20.

Biomolecular Frontiers Research Centre, Macquarie University, North Ryde, NSW, Australia.

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http://dx.doi.org/10.1007/s13361-013-0610-4DOI Listing
June 2013

IgG glycosylation changes and MBL2 polymorphisms: associations with markers of systemic inflammation and joint destruction in rheumatoid arthritis.

J Rheumatol 2012 Mar 15;39(3):463-9. Epub 2012 Jan 15.

Department of Rheumatology, Department of Clinical Immunology, Rigshospitalet, Copenhagen University Hospital, Copenhagen, Denmark.

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http://www.jrheum.org/cgi/doi/10.3899/jrheum.110584
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http://dx.doi.org/10.3899/jrheum.110584DOI Listing
March 2012

Association of medication with the human plasma N-glycome.

J Proteome Res 2012 Mar 9;11(3):1821-31. Epub 2012 Feb 9.

NIBRT Dublin-Oxford Glycobiology Laboratory, National Institute for Bioprocessing Research and Training , Fosters Avenue, Mount Merrion, Blackrock, Dublin 4, Ireland.

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http://dx.doi.org/10.1021/pr2010605DOI Listing
March 2012

Method for milk oligosaccharide profiling by 2-aminobenzamide labeling and hydrophilic interaction chromatography.

Glycobiology 2011 Oct 12;21(10):1317-30. Epub 2011 May 12.

National Institute for Bioprocessing Research and Training, Dublin-Oxford Glycobiology Laboratory, Conway Institute, University College Dublin, Belfield, Dublin 4, Ireland.

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http://dx.doi.org/10.1093/glycob/cwr067DOI Listing
October 2011

Levels of specific glycans significantly distinguish lymph node-positive from lymph node-negative breast cancer patients.

Glycobiology 2010 Oct 24;20(10):1283-8. Epub 2010 Jun 24.

UCD School of Medicine and Medical Science, Conway Institute of Biomolecular and Biomedical Research, University College Dublin, Dublin 4, Ireland.

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https://academic.oup.com/glycob/article-lookup/doi/10.1093/g
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http://dx.doi.org/10.1093/glycob/cwq090DOI Listing
October 2010