Joao M Rodrigues

Joao M O S Rodrigues

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Joao M Rodrigues

Joao M O S Rodrigues

Publications by authors named "Joao M O S Rodrigues"

11Publications

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1PubMed Central Citations

Distribution of Distances Between Symmetric Words in the Human Genome: Analysis of Regular Peaks.

Interdiscip Sci 2019 Sep 25;11(3):367-372. Epub 2019 Mar 25.

Department of Medical Sciences, iBiMED, IEETA-Institute of Electronics and Informatics Engineering of Aveiro, University of Aveiro, Campus Universitário de Santiago, Aveiro, Portugal.

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http://dx.doi.org/10.1007/s12539-019-00326-xDOI Listing
September 2019

Exceptional Symmetry by Genomic Word : A Statistical Analysis.

Interdiscip Sci 2017 Mar 19;9(1):14-23. Epub 2016 Nov 19.

iBiMED-Institute of Biomedicine, IEETA-Institute of Electronic Engineering and Informatics of Aveiro, Department of Medical Sciences, University of Aveiro, Campus Universitário de Santiago, Aveiro, Portugal.

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http://dx.doi.org/10.1007/s12539-016-0200-9DOI Listing
March 2017

The exceptional genomic word symmetry along DNA sequences.

BMC Bioinformatics 2016 Feb 3;17:59. Epub 2016 Feb 3.

Department of Medical Sciences and Institute of Biomedicine - iBiMED, University of Aveiro, 3810-193 Aveiro, Portugal, Campus Universitário de Santiago, Aveiro, Portugal.

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http://dx.doi.org/10.1186/s12859-016-0905-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4738807PMC
February 2016

Analysis of single-strand exceptional word symmetry in the human genome: new measures.

Biostatistics 2015 Apr 3;16(2):209-21. Epub 2014 Sep 3.

Department of Electronics, Telecommunications and Informatics, University of Aveiro, 3810-193 Aveiro, PortugalIEETA, University of Aveiro, 3810-193 Aveiro, Portugal.

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http://dx.doi.org/10.1093/biostatistics/kxu041DOI Listing
April 2015

Exceptional single strand DNA word symmetry: analysis of evolutionary potentialities.

J Integr Bioinform 2014 Oct 23;11(3):250. Epub 2014 Oct 23.

University of Aveiro, 3810-193 Aveiro, Portugal.

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http://dx.doi.org/10.2390/biecoll-jib-2014-250DOI Listing
October 2014

XS: a FASTQ read simulator.

BMC Res Notes 2014 Jan 16;7:40. Epub 2014 Jan 16.

Signal Processing Lab, IEETA/DETI University of Aveiro, Aveiro 3810-193, Portugal.

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http://dx.doi.org/10.1186/1756-0500-7-40DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3927261PMC
January 2014

The breakdown of the word symmetry in the human genome.

J Theor Biol 2013 Oct 2;335:153-9. Epub 2013 Jul 2.

CIDMA - Center for Research and Development in Mathematics and Applications, Department of Mathematics, University of Aveiro, 3810-193 Aveiro, Portugal.

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http://sweet.ua.pt/pjf/PDF/Ferreira2013f.pdf
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http://linkinghub.elsevier.com/retrieve/pii/S002251931300304
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http://dx.doi.org/10.1016/j.jtbi.2013.06.032DOI Listing
October 2013

Inter-dinucleotide distances in the human genome: an analysis of the whole-genome and protein-coding distributions.

J Integr Bioinform 2011 Sep 15;8(3):172. Epub 2011 Sep 15.

Signal Processing Lab, IEETA, University of Aveiro, 3810-193 Aveiro, Portugal.

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http://dx.doi.org/10.2390/biecoll-jib-2011-172DOI Listing
September 2011

Minimal absent words in prokaryotic and eukaryotic genomes.

PLoS One 2011 Jan 31;6(1):e16065. Epub 2011 Jan 31.

Signal Processing Laboratory, IEETA, University of Aveiro, Aveiro, Portugal.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0016065PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3031530PMC
January 2011

On finding minimal absent words.

BMC Bioinformatics 2009 May 8;10:137. Epub 2009 May 8.

Signal Processing Lab, DETI/IEETA, University of Aveiro, 3810-193 Aveiro, Portugal.

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http://dx.doi.org/10.1186/1471-2105-10-137DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2698904PMC
May 2009