Joao Carlos Setubal

Joao Carlos Setubal

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Joao Carlos Setubal

Joao Carlos Setubal

Publications by authors named "Joao Carlos Setubal"

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20Publications

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Identification and characterization of putative Aeromonas spp. T3SS effectors.

PLoS One 2019 4;14(6):e0214035. Epub 2019 Jun 4.

Department of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0214035PLOS
June 2019

Machine learning meets genome assembly.

Brief Bioinform 2018 Aug 17. Epub 2018 Aug 17.

Federal University of Pará, Brazil.

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http://dx.doi.org/10.1093/bib/bby072DOI Listing
August 2018

TabPath: interactive tables for metabolic pathway analysis.

Bioinformatics 2018 03;34(6):1040-1042

Laboratório Multiusuário de Bioinformática, Núcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Ouro Preto, MG 35400-000, Brazil.

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http://dx.doi.org/10.1093/bioinformatics/btx714DOI Listing
March 2018

Plasmid-mediated mcr-1 in carbapenem-susceptible Escherichia coli ST156 causing a blood infection: an unnoticeable spread of colistin resistance in Brazil?

Clinics (Sao Paulo) 2017 Oct;72(10):642-644

Divisao Laboratorio Central - LIM03, Setor de Microbiologia, Hospital das Clinicas HCFMUSP, Faculdade de Medicina, Universidade de Sao Paulo, Sao Paulo, SP, BR.

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http://dx.doi.org/10.6061/clinics/2017(10)09DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5666441PMC
October 2017

The Candidatus Liberibacter-Host Interface: Insights into Pathogenesis Mechanisms and Disease Control.

Annu Rev Phytopathol 2017 08 21;55:451-482. Epub 2017 Jun 21.

Department of Biochemistry, Institute of Chemistry, University of São Paulo, São Paulo, SP, 05508-000, Brazil.

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http://dx.doi.org/10.1146/annurev-phyto-080516-035513DOI Listing
August 2017

Non-coding transcription characterization and annotation: a guide and web resource for non-coding RNA databases.

RNA Biol 2012 Mar 1;9(3):274-82. Epub 2012 Mar 1.

Engenharia da Computação, Universidade Tecnológica Federal do Paraná-Campus Cornélio Procópio, Cornélio Procópio, Brazil.

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http://dx.doi.org/10.4161/rna.19352DOI Listing
March 2012

Component identification of electron transport chains in curdlan-producing Agrobacterium sp. ATCC 31749 and its genome-specific prediction using comparative genome and phylogenetic trees analysis.

J Ind Microbiol Biotechnol 2011 Jun 22;38(6):667-77. Epub 2010 Aug 22.

Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, China.

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http://dx.doi.org/10.1007/s10295-010-0810-xDOI Listing
June 2011

Missing genes in the annotation of prokaryotic genomes.

BMC Bioinformatics 2010 Mar 15;11:131. Epub 2010 Mar 15.

Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA, USA.

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http://dx.doi.org/10.1186/1471-2105-11-131DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098052PMC
March 2010

The Genome Reverse Compiler: an explorative annotation tool.

BMC Bioinformatics 2009 Jan 27;10:35. Epub 2009 Jan 27.

Virginia Bioinformatics Institute, Virginia Tech, Blacksburg, VA, USA.

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http://dx.doi.org/10.1186/1471-2105-10-35DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2640359PMC
January 2009