Jo-Anne Vergilio

Jo-Anne Vergilio

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Jo-Anne Vergilio

Jo-Anne Vergilio

Publications by authors named "Jo-Anne Vergilio"

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54Publications

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Genomic Characterization of Testicular Germ Cell Tumors Relapsing After Chemotherapy.

Authors:
Andrea Necchi Gennady Bratslavsky Robert J Corona Jon H Chung Sherri Z Millis Julia A Elvin Jo-Anne Vergilio James Suh Shakti Ramkissoon Eric Severson Sugganth Daniel Jonathan K Killian Siraj M Ali Alexa B Schrock Prasanth Reddy Vincent A Miller Allison Welsh Laurie M Gay Jeffrey S Ross

Eur Urol Focus 2020 Jan 17;6(1):122-130. Epub 2018 Jul 17.

Upstate Medical University, Syracuse, NY, USA; Foundation Medicine Inc., Cambridge, MA, USA.

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http://dx.doi.org/10.1016/j.euf.2018.07.013DOI Listing
January 2020

Comprehensive Assessment of Immuno-oncology Biomarkers in Adenocarcinoma, Urothelial Carcinoma, and Squamous-cell Carcinoma of the Bladder.

Authors:
Andrea Necchi Russell Madison Daniele Raggi Joseph M Jacob Gennady Bratslavsky Oleg Shapiro Julia A Elvin Jo-Anne Vergilio Jonathan K Killian Nhu Ngo Shakti Ramkissoon Eric Severson Amanda C Hemmerich Richard Huang Siraj M Ali Jon H Chung Prasanth Reddy Vincent A Miller Alexa B Schrock Laurie M Gay Brian M Alexander Petros Grivas Jeffrey S Ross

Eur Urol 2020 Jan 17. Epub 2020 Jan 17.

Foundation Medicine, Cambridge, MA, USA; Upstate Medical University, Syracuse, NY, USA.

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http://dx.doi.org/10.1016/j.eururo.2020.01.003DOI Listing
January 2020

SMARCA4 inactivation defines a subset of undifferentiated uterine sarcomas with rhabdoid and small cell features and germline mutation association.

Authors:
Douglas I Lin Justin M Allen Jonathan L Hecht Jonathan K Killian Nhu T Ngo Claire Edgerly Eric A Severson Siraj M Ali Rachel L Erlich Shakti H Ramkissoon Jo-Anne Vergilio Jeffrey S Ross Julia A Elvin

Mod Pathol 2019 11 12;32(11):1675-1687. Epub 2019 Jun 12.

Foundation Medicine Inc., Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1038/s41379-019-0303-zDOI Listing
November 2019

Genomic Features of Metastatic Testicular Sex Cord Stromal Tumors.

Authors:
Andrea Necchi Gennady Bratslavsky Oleg Shapiro Julia A Elvin Jo-Anne Vergilio Jonathan K Killian Nhu Ngo Shakti Ramkissoon Eric Severson Amanda C Hemmerich Siraj M Ali Jon H Chung Prasanth Reddy Vincent A Miller Alexa B Schrock Laurie M Gay Jeffrey S Ross Joseph M Jacob

Eur Urol Focus 2019 Sep 27;5(5):748-755. Epub 2019 May 27.

Upstate Medical University, Syracuse, NY, USA.

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http://dx.doi.org/10.1016/j.euf.2019.05.012DOI Listing
September 2019

Genomic Landscape of Adult and Pediatric -Like B-Lymphoblastic Leukemia Using Parallel DNA and RNA Sequencing.

Authors:
Eric A Severson Jo-Anne Vergilio Laurie M Gay Sugganth Daniel Amanda C Hemmerich Julia A Elvin Nicholas Britt Michelle Nahas Michael B Cohen Charlotte Brown Pratheesh Sathyan Andrew Rankin Vincent Miller Jeffrey S Ross Shakti H Ramkissoon

Oncologist 2019 03 4;24(3):372-374. Epub 2018 Sep 4.

Foundation Medicine, Morrisville, North Carolina, USA.

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http://dx.doi.org/10.1634/theoncologist.2018-0272DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6519773PMC
March 2019

Comparative Genomic Profiling of Refractory and Metastatic Penile and Nonpenile Cutaneous Squamous Cell Carcinoma: Implications for Selection of Systemic Therapy.

Authors:
Joseph M Jacob Elizabeth K Ferry Laurie M Gay Julia A Elvin Jo-Anne Vergilio Shakti Ramkissoon Eric Severson Andrea Necchi J Keith Killian Siraj M Ali Alexa B Schrock Nick W Liu J Chung V A Miller P J Stephens A Welsh Robert J Corona Jeffrey S Ross Gennady Bratslavsky

J Urol 2019 03;201(3):541-548

Upstate Medical University , Syracuse , New York.

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http://dx.doi.org/10.1016/j.juro.2018.09.056DOI Listing
March 2019

Comprehensive Genomic Profiling of Hodgkin Lymphoma Reveals Recurrently Mutated Genes and Increased Mutation Burden.

Authors:
Winnie S Liang Jo-Anne Vergilio Bodour Salhia Helen J Huang Yasuhiro Oki Ignacio Garrido-Laguna Haeseong Park Jason R Westin Funda Meric-Bernstam David Fabrizio Vincent A Miller Philip J Stephens Michelle A Fanale Jeffrey S Ross Filip Janku

Oncologist 2019 02 14;24(2):219-228. Epub 2018 Aug 14.

Department of Investigational Cancer Therapeutics (Phase I Clinical Trials Program), The University of Texas MD Anderson Cancer Center, Houston, Texas, USA

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http://dx.doi.org/10.1634/theoncologist.2018-0058DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6369943PMC
February 2019

Comprehensive Genomic Profiling Reveals Diverse but Actionable Molecular Portfolios across Hematologic Malignancies: Implications for Next Generation Clinical Trials.

Authors:
Natalie Galanina Rafael Bejar Michael Choi Aaron Goodman Matthew Wieduwilt Carolyn Mulroney Lisa Kim Huwate Yeerna Pablo Tamayo Jo-Anne Vergilio Tariq I Mughal Vincent Miller Catriona Jamieson Razelle Kurzrock

Cancers (Basel) 2018 Dec 21;11(1). Epub 2018 Dec 21.

Department of Medicine, Division of Hematology/Oncology and Center for Personalized Cancer Therapy, University of California San Diego, 3855 Health Science Drive #0987, La Jolla, CA 92093, USA.

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http://dx.doi.org/10.3390/cancers11010011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6356731PMC
December 2018

Hybrid Capture-Based Comprehensive Genomic Profiling Identifies Lung Cancer Patients with Well-Characterized Sensitizing Epidermal Growth Factor Receptor Point Mutations That Were Not Detected by Standard of Care Testing.

Authors:
James H Suh Alexa B Schrock Adrienne Johnson Doron Lipson Laurie M Gay Shakti Ramkissoon Jo-Anne Vergilio Julia A Elvin Abdur Shakir Peter Ruehlman Karen L Reckamp Sai-Hong Ignatius Ou Jeffrey S Ross Philip J Stephens Vincent A Miller Siraj M Ali

Oncologist 2018 07 14;23(7):776-781. Epub 2018 Mar 14.

Foundation Medicine Inc., Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1634/theoncologist.2017-0493DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6058345PMC
July 2018

Detection of clonal hematopoiesis of indeterminate potential in clinical sequencing of solid tumor specimens.

Authors:
Eric A Severson Gregory M Riedlinger Caitlin F Connelly Jo-Anne Vergilio Mendel Goldfinger Shakti Ramkissoon Garrett M Frampton Jeffrey S Ross Anthony Fratella-Calabrese Laurie Gay Siraj Ali Vincent Miller Julia Elvin Mohammad Hadigol Kim M Hirshfield Lorna Rodriguez-Rodriguez Shridar Ganesan Hossein Khiabanian

Blood 2018 05 20;131(22):2501-2505. Epub 2018 Apr 20.

Rutgers Cancer Institute of New Jersey, Rutgers University, New Brunswick, NJ.

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http://dx.doi.org/10.1182/blood-2018-03-840629DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5981171PMC
May 2018

Targeting HER2 in colorectal cancer: The landscape of amplification and short variant mutations in ERBB2 and ERBB3.

Authors:
Jeffrey S Ross Marwan Fakih Siraj M Ali Julia A Elvin Alexa B Schrock James Suh Jo-Anne Vergilio Shakti Ramkissoon Eric Severson Sugganth Daniel David Fabrizio Garrett Frampton James Sun Vincent A Miller Philip J Stephens Laurie M Gay

Cancer 2018 04 16;124(7):1358-1373. Epub 2018 Jan 16.

Foundation Medicine Inc, Cambridge, Massachusetts.

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http://dx.doi.org/10.1002/cncr.31125DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5900732PMC
April 2018

Comprehensive Genomic Profiling of 282 Pediatric Low- and High-Grade Gliomas Reveals Genomic Drivers, Tumor Mutational Burden, and Hypermutation Signatures.

Authors:
Adrienne Johnson Eric Severson Laurie Gay Jo-Anne Vergilio Julia Elvin James Suh Sugganth Daniel Mandy Covert Garrett M Frampton Sigmund Hsu Glenn J Lesser Kimberly Stogner-Underwood Ryan T Mott Sarah Z Rush Jennifer J Stanke Sonika Dahiya James Sun Prasanth Reddy Zachary R Chalmers Rachel Erlich Yakov Chudnovsky David Fabrizio Alexa B Schrock Siraj Ali Vincent Miller Philip J Stephens Jeffrey Ross John R Crawford Shakti H Ramkissoon

Oncologist 2017 12 14;22(12):1478-1490. Epub 2017 Sep 14.

Foundation Medicine, Inc., Morrisville, North Carolina and Cambridge, Massachusetts, USA

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http://dx.doi.org/10.1634/theoncologist.2017-0242DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5728033PMC
December 2017

General paucity of genomic alteration and low tumor mutation burden in refractory and metastatic hepatoblastoma: comprehensive genomic profiling study.

Authors:
Hwajeong Lee Tony El Jabbour Sanaz Ainechi Laurie M Gay Julia A Elvin Jo-Anne Vergilio James Suh Shakti H Ramkissoon Siraj M Ali Alexa Schrock David Fabrizio Garrett Frampton Tipu Nazeer Vincent A Miller Philip J Stephens Jeffrey S Ross

Hum Pathol 2017 12 24;70:84-91. Epub 2017 Oct 24.

Albany Medical College, Albany, NY 12208, USA; Foundation Medicine, Inc. Cambridge, MA 02141, USA.

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http://dx.doi.org/10.1016/j.humpath.2017.10.007DOI Listing
December 2017

Fusions in a Wide Variety of Tumor Types Respond to Anti-ALK Targeted Therapy.

Authors:
Jeffrey S Ross Siraj M Ali Omotayo Fasan Jared Block Sumanta Pal Julia A Elvin Alexa B Schrock James Suh Sahar Nozad Sungeun Kim Hwa Jeong Lee Christine E Sheehan David M Jones Jo-Anne Vergilio Shakti Ramkissoon Eric Severson Sugganth Daniel David Fabrizio Garrett Frampton Vince A Miller Philip J Stephens Laurie M Gay

Oncologist 2017 12 27;22(12):1444-1450. Epub 2017 Oct 27.

Foundation Medicine, Inc., Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1634/theoncologist.2016-0488DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5728036PMC
December 2017

Unique genomic features in adolescent and young adult, as compared to older adult, non-Hodgkin lymphoma and potential therapeutic targets.

Authors:
Adrienne Johnson Deborah Morosini Jo-Anne Vergilio Roman Yelensky Mark Rosenzweig Depinder Khaira Siraj M Ali Norma Palma Doron Lipson Frank Juhn Rachel Erlich Philip J Stephens Jeffrey S Ross Vincent A Miller Kai Wang

Br J Haematol 2017 08 12;178(4):640-642. Epub 2016 Jun 12.

Foundation Medicine, Inc., Cambridge, MA, USA.

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http://dx.doi.org/10.1111/bjh.14157DOI Listing
August 2017

Neonatal anemia: Revisiting the enigmatic pyknocyte.

Authors:
Michele L Nassin Jo-Anne Vergilio Matthew M Heeney James L LaBelle

Am J Hematol 2017 Jul 26;92(7):717-721. Epub 2017 May 26.

Department of Pediatrics, Section of Hematology/Oncology/Stem Cell Transplantation, University of Chicago, Comer Children's Hospital, Chicago, Illinois, USA.

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http://dx.doi.org/10.1002/ajh.24731DOI Listing
July 2017

Comprehensive Genomic Profiling of Esthesioneuroblastoma Reveals Additional Treatment Options.

Authors:
Laurie M Gay Sungeun Kim Kyle Fedorchak Madappa Kundranda Yazmin Odia Chaitali Nangia James Battiste Gerardo Colon-Otero Steven Powell Jeffery Russell Julia A Elvin Jo-Anne Vergilio James Suh Siraj M Ali Philip J Stephens Vincent A Miller Jeffrey S Ross

Oncologist 2017 07 11;22(7):834-842. Epub 2017 May 11.

Foundation Medicine, Inc., Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1634/theoncologist.2016-0287DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5507647PMC
July 2017

Comprehensive genomic profiling of malignant phyllodes tumors of the breast.

Authors:
Sahar Nozad Christine E Sheehan Laurie M Gay Julia A Elvin Jo-Anne Vergilio James Suh Shakti Ramkissoon Alexa B Schrock Kim M Hirshfield Nadia Ali Shridar Ganesan Siraj M Ali Vincent A Miller Philip J Stephens Jeffrey S Ross Jon H Chung

Breast Cancer Res Treat 2017 04 17;162(3):597-602. Epub 2017 Feb 17.

Foundation Medicine, Inc., Cambridge, MA, USA.

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http://dx.doi.org/10.1007/s10549-017-4156-1DOI Listing
April 2017

Activity of c-Met/ALK Inhibitor Crizotinib and Multi-Kinase VEGF Inhibitor Pazopanib in Metastatic Gastrointestinal Neuroectodermal Tumor Harboring EWSR1-CREB1 Fusion.

Authors:
Vivek Subbiah Oliver Holmes Kyle Gowen Daniel Spritz Behrang Amini Wei-Lien Wang Alexa B Schrock Funda Meric-Bernstam Ralph Zinner Sarina Piha-Paul Maria Zarzour Julia A Elvin Rachel L Erlich David L Stockman Jo-Anne Vergilio James H Suh Philip J Stephens Vincent Miller Jeffrey S Ross Siraj M Ali

Oncology 2016 21;91(6):348-353. Epub 2016 Oct 21.

The University of Texas MD Anderson Cancer Center, Houston, Tex., USA.

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http://dx.doi.org/10.1159/000449204DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5130597PMC
January 2017

Next-Generation Sequencing Reveals Pathway Activations and New Routes to Targeted Therapies in Cutaneous Metastatic Melanoma.

Authors:
J Andrew Carlson Jose Candido Caldeira Xavier Ashley Tarasen Christine E Sheehan Geoff Otto Vincent A Miller Philip J Stephens Julia A Elvin Jo-Anne Vergilio James Suh Laurie M Gay Jeffrey S Ross

Am J Dermatopathol 2017 Jan;39(1):1-13

*Professor of Pathology and Dermatology, Albany Medical College, Albany, NY; †Pathology Resident, Unversidade Estadual Paulista, Botucatu, Brazil; ‡Pathology Resident, Albany Medical College, Albany, NY; §Director of Research, Associate Professor, Department of Pathology, Albany, Medical College, Albany, NY; ¶Research and Development, Foundation Medicine, Inc, Cambridge, MA; ‖Chief Medical Officer, Foundation Medicine, Inc, Cambridge, MA; #Chief Scientific Officer, Foundation Medicine, Inc, Cambridge, MA; **Associate Medical Officer, Foundation Medicine, Inc, Cambridge, MA; ††Associate Medical Director, Foundation Medicine, Inc, Cambridge, MA; ‡‡Research Scientist, Foundation Medicine, Inc, Cambridge, MA; §§Chief, Professor of Pathology, Albany, Medical College, Albany, NY; and ¶¶Medical Director, Foundation Medicine, Inc, Cambridge, MA.

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http://dx.doi.org/10.1097/DAD.0000000000000729DOI Listing
January 2017

Genomic Profiling of a Large Set of Diverse Pediatric Cancers Identifies Known and Novel Mutations across Tumor Spectra.

Authors:
Juliann Chmielecki Mark Bailey Jie He Julia Elvin Jo-Anne Vergilio Shakti Ramkissoon James Suh Garrett M Frampton James X Sun Samantha Morley Daniel Spritz Siraj Ali Laurie Gay Rachel L Erlich Jeffrey S Ross Joana Buxhaku Hilary Davies Vinny Faso Alexis Germain Blair Glanville Vincent A Miller Philip J Stephens Katherine A Janeway John M Maris Soheil Meshinchi Trevor J Pugh Jack F Shern Doron Lipson

Cancer Res 2017 01 9;77(2):509-519. Epub 2017 Jan 9.

Foundation Medicine, Cambridge, Massachusetts.

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http://dx.doi.org/10.1158/0008-5472.CAN-16-1106DOI Listing
January 2017

Comprehensive Genomic Profiling of Clinically Advanced Medullary Thyroid Carcinoma.

Authors:
Andreas M Heilmann Vivek Subbiah Kai Wang James X Sun Julia A Elvin Juliann Chmielecki Steven I Sherman Ravi Murthy Naifa L Busaidy Ishwaria Subbiah Roman Yelensky Chaitali Nangia Jo-Anne Vergilio Saad A Khan Rachel L Erlich Doron Lipson Jeffrey S Ross Vincent A Miller Manisha H Shah Siraj M Ali Philip J Stephens

Oncology 2016 21;90(6):339-46. Epub 2016 May 21.

Foundation Medicine, Inc., Cambridge, Mass., USA.

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http://dx.doi.org/10.1159/000445978DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4909575PMC
December 2016

Nonamplification ERBB2 genomic alterations in 5605 cases of recurrent and metastatic breast cancer: An emerging opportunity for anti-HER2 targeted therapies.

Authors:
Jeffrey S Ross Laurie M Gay Kai Wang Siraj M Ali Saranya Chumsri Julia A Elvin Ron Bose Jo-Anne Vergilio James Suh Roman Yelensky Doron Lipson Juliann Chmielecki Stanley Waintraub Brian Leyland-Jones Vincent A Miller Philip J Stephens

Cancer 2016 09 10;122(17):2654-62. Epub 2016 Jun 10.

Foundation Medicine Inc, Cambridge, Massachusetts.

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http://dx.doi.org/10.1002/cncr.30102DOI Listing
September 2016

Integrated genomic DNA/RNA profiling of hematologic malignancies in the clinical setting.

Authors:
Jie He Omar Abdel-Wahab Michelle K Nahas Kai Wang Raajit K Rampal Andrew M Intlekofer Jay Patel Andrei Krivstov Garrett M Frampton Lauren E Young Shan Zhong Mark Bailey Jared R White Steven Roels Jason Deffenbaugh Alex Fichtenholtz Timothy Brennan Mark Rosenzweig Kimberly Pelak Kristina M Knapp Kristina W Brennan Amy L Donahue Geneva Young Lazaro Garcia Selmira T Beckstrom Mandy Zhao Emily White Vera Banning Jamie Buell Kiel Iwanik Jeffrey S Ross Deborah Morosini Anas Younes Alan M Hanash Elisabeth Paietta Kathryn Roberts Charles Mullighan Ahmet Dogan Scott A Armstrong Tariq Mughal Jo-Anne Vergilio Elaine Labrecque Rachel Erlich Christine Vietz Roman Yelensky Philip J Stephens Vincent A Miller Marcel R M van den Brink Geoff A Otto Doron Lipson Ross L Levine

Blood 2016 06 10;127(24):3004-14. Epub 2016 Mar 10.

Leukemia Service, Department of Medicine, Human Oncology and Pathogenesis Program, Leukemia Center.

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http://www.bloodjournal.org/content/early/2016/03/10/blood-2
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http://www.bloodjournal.org/cgi/doi/10.1182/blood-2015-08-66
Publisher Site
http://dx.doi.org/10.1182/blood-2015-08-664649DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4968346PMC
June 2016

Comprehensive Genomic Profiling Facilitates Implementation of the National Comprehensive Cancer Network Guidelines for Lung Cancer Biomarker Testing and Identifies Patients Who May Benefit From Enrollment in Mechanism-Driven Clinical Trials.

Authors:
James H Suh Adrienne Johnson Lee Albacker Kai Wang Juliann Chmielecki Garrett Frampton Laurie Gay Julia A Elvin Jo-Anne Vergilio Siraj Ali Vincent A Miller Philip J Stephens Jeffrey S Ross

Oncologist 2016 06 5;21(6):684-91. Epub 2016 May 5.

Foundation Medicine, Inc., Cambridge, Massachusetts, USA.

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http://dx.doi.org/10.1634/theoncologist.2016-0030DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4912374PMC
June 2016

The distribution of BRAF gene fusions in solid tumors and response to targeted therapy.

Authors:
Jeffrey S Ross Kai Wang Juliann Chmielecki Laurie Gay Adrienne Johnson Jacob Chudnovsky Roman Yelensky Doron Lipson Siraj M Ali Julia A Elvin Jo-Anne Vergilio Steven Roels Vincent A Miller Brooke N Nakamura Adam Gray Michael K Wong Philip J Stephens

Int J Cancer 2016 Feb 8;138(4):881-90. Epub 2015 Sep 8.

Foundation Medicine, Inc., Cambridge, MA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5049644PMC
http://dx.doi.org/10.1002/ijc.29825DOI Listing
February 2016

Consensus guidelines on plasma cell myeloma minimal residual disease analysis and reporting.

Authors:
Maria Arroz Neil Came Pei Lin Weina Chen Constance Yuan Anand Lagoo Mariela Monreal Ruth de Tute Jo-Anne Vergilio Andy C Rawstron Bruno Paiva

Cytometry B Clin Cytom 2016 Jan 2;90(1):31-9. Epub 2015 Jun 2.

Clinica Universidad de Navarra, Centro de Investigación Médica Aplicada, University of Navarra, Pamplona, Spain.

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http://dx.doi.org/10.1002/cyto.b.21228DOI Listing
January 2016

Evaluation of 122 advanced-stage cutaneous squamous cell carcinomas by comprehensive genomic profiling opens the door for new routes to targeted therapies.

Authors:
Rami N Al-Rohil Ashley J Tarasen J Andrew Carlson Kai Wang Adrienne Johnson Roman Yelensky Doron Lipson Julia A Elvin Jo-Anne Vergilio Siraj M Ali James Suh Vincent A Miller Philip J Stephens Prasanth Ganesan Filip Janku Daniel D Karp Vivek Subbiah Martin C Mihm Jeffrey S Ross

Cancer 2016 Jan 19;122(2):249-57. Epub 2015 Oct 19.

Department of Pathology and Laboratory Medicine, Albany Medical College, Albany, New York.

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http://doi.wiley.com/10.1002/cncr.29738
Publisher Site
http://dx.doi.org/10.1002/cncr.29738DOI Listing
January 2016

Clinically advanced and metastatic pure mucinous carcinoma of the breast: a comprehensive genomic profiling study.

Authors:
Jeffrey S Ross Laurie M Gay Sahar Nozad Kai Wang Siraj M Ali Ann Boguniewicz Depinder Khaira Adrienne Johnson Julia A Elvin Jo-Anne Vergilio James Suh Vincent A Miller Philip J Stephens

Breast Cancer Res Treat 2016 Jan 13;155(2):405-13. Epub 2016 Jan 13.

Foundation Medicine, Inc., Cambridge, MA, USA.

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http://dx.doi.org/10.1007/s10549-016-3682-6DOI Listing
January 2016

BRAF V600E mutation-specific immunohistochemistry is a rare finding in dendritic cell- and histiocyte-derived tumors.

Authors:
Yuri Fedoriw Young S Kim Jo-Anne Vergilio Z Will Chen Lawrence M Weiss Dennis P O'Malley

Leuk Lymphoma 2015 Apr 10;56(4):1132-3. Epub 2014 Nov 10.

Department of Pathology and Laboratory Medicine, University of North Carolina , Wilmington, NC , USA.

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http://dx.doi.org/10.3109/10428194.2014.946028DOI Listing
April 2015

Transient abnormal myelopoiesis in neonates: GATA get the diagnosis.

Authors:
Melissa Bombery Jo-Anne Vergilio

Arch Pathol Lab Med 2014 Oct;138(10):1302-6

From the Department of Pathology, University of Michigan Health System, Ann Arbor.

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http://dx.doi.org/10.5858/arpa.2014-0304-CCDOI Listing
October 2014

Orbital follicular hyperplasia in common variable immune deficiency syndrome.

Authors:
Meenakashi Gupta Ankoor S Shah Jo-Anne Vergilio Janet Chou Alexandra Elliott

Ophthalmic Plast Reconstr Surg 2013 Nov-Dec;29(6):e160-2

*Department of Ophthalmology, Massachusetts Eye and Ear Infirmary; †Department of Ophthalmology, Harvard Medical School; ‡Department of Ophthalmology, Boston Children's Hospital; §Department of Pathology, Boston Children's Hospital; ‖Department of Pathology, Harvard Medical School; ¶Department of Allergy/Immunology, Boston Children's Hospital; and #Department of Pediatrics, Harvard Medical School, Boston, Massachusetts, U.S.A.

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http://dx.doi.org/10.1097/IOP.0b013e3182873c61DOI Listing
May 2014

Congenital langerhans cell histiocytosis with placental involvement.

Authors:
Jefferson Terry Francesca R Pluchinotta Stephen P Sanders Jo-Anne Vergilio Scott R Hyde Theonia K Boyd

Pediatr Dev Pathol 2013 May-Jun;16(3):224-8. Epub 2013 Feb 22.

Department of Pathology, Boston Children's Hospital and Harvard Medical School, Room BA-121, 300 Longwood Avenue, Boston, MA 02115, USA.

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http://dx.doi.org/10.2350/12-11-1277-CR.1DOI Listing
August 2013

Pathogenesis of Langerhans cell histiocytosis.

Authors:
Gayane Badalian-Very Jo-Anne Vergilio Mark Fleming Barrett J Rollins

Annu Rev Pathol 2013 Jan 6;8:1-20. Epub 2012 Aug 6.

Department of Medical Oncology, Dana-Farber Cancer Institute, and Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02215, USA.

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http://dx.doi.org/10.1146/annurev-pathol-020712-163959DOI Listing
January 2013

Exome sequencing identifies GATA1 mutations resulting in Diamond-Blackfan anemia.

Authors:
Vijay G Sankaran Roxanne Ghazvinian Ron Do Prathapan Thiru Jo-Anne Vergilio Alan H Beggs Colin A Sieff Stuart H Orkin David G Nathan Eric S Lander Hanna T Gazda

J Clin Invest 2012 Jul 18;122(7):2439-43. Epub 2012 Jun 18.

Broad Institute, Cambridge, MA, USA.

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http://dx.doi.org/10.1172/JCI63597DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3386831PMC
July 2012

Recent advances in the understanding of Langerhans cell histiocytosis.

Authors:
Gayane Badalian-Very Jo-Anne Vergilio Barbara A Degar Carlos Rodriguez-Galindo Barrett J Rollins

Br J Haematol 2012 Jan 24;156(2):163-72. Epub 2011 Oct 24.

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.

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http://dx.doi.org/10.1111/j.1365-2141.2011.08915.xDOI Listing
January 2012

Epoxyeicosanoids stimulate multiorgan metastasis and tumor dormancy escape in mice.

Authors:
Dipak Panigrahy Matthew L Edin Craig R Lee Sui Huang Diane R Bielenberg Catherine E Butterfield Carmen M Barnés Akiko Mammoto Tadanori Mammoto Ayala Luria Ofra Benny Deviney M Chaponis Andrew C Dudley Emily R Greene Jo-Anne Vergilio Giorgio Pietramaggiori Sandra S Scherer-Pietramaggiori Sarah M Short Meetu Seth Fred B Lih Kenneth B Tomer Jun Yang Reto A Schwendener Bruce D Hammock John R Falck Vijaya L Manthati Donald E Ingber Arja Kaipainen Patricia A D'Amore Mark W Kieran Darryl C Zeldin

J Clin Invest 2012 Jan 19;122(1):178-91. Epub 2011 Dec 19.

Vascular Biology Program, Children's Hospital Boston, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1172/JCI58128DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3248288PMC
January 2012

Bactericidal/permeability-increasing protein (rBPI21) and fluoroquinolone mitigate radiation-induced bone marrow aplasia and death.

Authors:
Eva C Guinan Christine M Barbon Leslie A Kalish Kalindi Parmar Jeff Kutok Christy J Mancuso Liat Stoler-Barak Eugénie E Suter Janice D Russell Christine D Palmer Leighanne C Gallington Annie Voskertchian Jo-Anne Vergilio Geoffrey Cole Kaya Zhu Alan D'Andrea Robert Soiffer Jerrold P Weiss Ofer Levy

Sci Transl Med 2011 Nov;3(110):110ra118

Department of Radiation Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.

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http://stm.sciencemag.org/cgi/doi/10.1126/scitranslmed.30031
Publisher Site
http://dx.doi.org/10.1126/scitranslmed.3003126DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4096810PMC
November 2011

Neonatal enteroviral sepsis/meningoencephalitis and hemophagocytic lymphohistiocytosis: diagnostic challenges.

Authors:
Kristen Earley Lindamood Patricia Fleck Anupama Narla Jo-Anne Vergilio Barbara A Degar Michael Baldwin Pia Wintermark

Am J Perinatol 2011 May 18;28(5):337-46. Epub 2010 Nov 18.

Division of Newborn Medicine, Children's Hospital Boston, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1055/s-0030-1268710DOI Listing
May 2011

MicroRNA-15a and -16-1 act via MYB to elevate fetal hemoglobin expression in human trisomy 13.

Authors:
Vijay G Sankaran Tobias F Menne Danilo Šćepanović Jo-Anne Vergilio Peng Ji Jinkuk Kim Prathapan Thiru Stuart H Orkin Eric S Lander Harvey F Lodish

Proc Natl Acad Sci U S A 2011 Jan 4;108(4):1519-24. Epub 2011 Jan 4.

Whitehead Institute for Biomedical Research, Cambridge, MA 02142, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3029749PMC
January 2011

Recurrent BRAF mutations in Langerhans cell histiocytosis.

Authors:
Gayane Badalian-Very Jo-Anne Vergilio Barbara A Degar Laura E MacConaill Barbara Brandner Monica L Calicchio Frank C Kuo Azra H Ligon Kristen E Stevenson Sarah M Kehoe Levi A Garraway William C Hahn Matthew Meyerson Mark D Fleming Barrett J Rollins

Blood 2010 Sep 2;116(11):1919-23. Epub 2010 Jun 2.

Department of Medical Oncology, Dana-Farber Cancer Institute, 44 Binney St., Boston, MA 02115, USA.

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http://dx.doi.org/10.1182/blood-2010-04-279083DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3173987PMC
September 2010

Identification of del(20q) in a subset of patients diagnosed with idiopathic thrombocytopenic purpura.

Authors:
Chad P Soupir Jo-Anne Vergilio Eileen Kelly Paola Dal Cin David Kuter Robert P Hasserjian

Br J Haematol 2009 Mar 26;144(5):800-2. Epub 2008 Nov 26.

Department of Pathology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA.

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http://dx.doi.org/10.1111/j.1365-2141.2008.07508.xDOI Listing
March 2009

Recurrent acute promyelocytic leukemia presenting as a sacral nerve root mass.

Authors:
Santosh Kesari Jan Drappatz Serra Akar Jo-Anne Vergilio Patrick Y Wen Robert J Soiffer Richard M Stone Daniel J Deangelo

J Clin Oncol 2008 Jul;26(19):3279-81

Department of Neurology, Dana-Farber Cancer Institute/Brigham and Women's Hospital, Boston, MA, USA.

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http://dx.doi.org/10.1200/JCO.2007.15.6729DOI Listing
July 2008

Molecular diagnosis and monitoring in the clinical management of patients with chronic myelogenous leukemia treated with tyrosine kinase inhibitors.

Authors:
Joyce Ou Jo-Anne Vergilio Adam Bagg

Am J Hematol 2008 Apr;83(4):296-302

Department of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA 19104-4283, USA.

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http://doi.wiley.com/10.1002/ajh.21096
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April 2008

Characteristic expression patterns of TCL1, CD38, and CD44 identify aggressive lymphomas harboring a MYC translocation.

Authors:
Scott J Rodig Jo-Anne Vergilio Aliakbar Shahsafaei David M Dorfman

Am J Surg Pathol 2008 Jan;32(1):113-22

Department of Pathology, Brigham & Women's Hospital, Boston, MA, USA.

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January 2008

Philadelphia chromosome-positive acute myeloid leukemia: a rare aggressive leukemia with clinicopathologic features distinct from chronic myeloid leukemia in myeloid blast crisis.

Authors:
Chad P Soupir Jo-Anne Vergilio Paola Dal Cin Alona Muzikansky Hagop Kantarjian Dan Jones Robert P Hasserjian

Am J Clin Pathol 2007 Apr;127(4):642-50

The Departments of Pathology, Massachusetts General Hospital, Boston, MA 02114, USA.

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http://dx.doi.org/10.1309/B4NVER1AJJ84CTUUDOI Listing
April 2007

Distribution of hematopoietic stem cells in the bone marrow according to regional hypoxia.

Authors:
Kalindi Parmar Peter Mauch Jo-Anne Vergilio Robert Sackstein Julian D Down

Proc Natl Acad Sci U S A 2007 Mar 20;104(13):5431-6. Epub 2007 Mar 20.

Department of Radiation Oncology, Dana-Farber Cancer Institute, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.

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http://dx.doi.org/10.1073/pnas.0701152104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1838452PMC
March 2007

Flow-cytometric analysis of peripheral blood neutrophils: a simple, objective, independent and potentially clinically useful assay to facilitate the diagnosis of myelodysplastic syndromes.

Authors:
Sindhu Cherian Jonni Moore Andrew Bantly Jo-Anne Vergilio Peter Klein Selina Luger Adam Bagg

Am J Hematol 2005 Jul;79(3):243-5

Department of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104-4283, USA.

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http://doi.wiley.com/10.1002/ajh.20371
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July 2005

CD10 and BCL6 expression in the diagnosis of angioimmunoblastic T-cell lymphoma: utility of detecting CD10+ T cells by flow cytometry.

Authors:
Constance M Yuan Jo-Anne Vergilio Xian-Feng Zhao Treasa K Smith Nancy Lee Harris Adam Bagg

Hum Pathol 2005 Jul;36(7):784-91

Department of Pathology, Immunology and Laboratory Medicine, University of Florida, Gainesville, FL 32610, USA.

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http://dx.doi.org/10.1016/j.humpath.2005.05.008DOI Listing
July 2005

Peripheral blood MDS score: a new flow cytometric tool for the diagnosis of myelodysplastic syndromes.

Authors:
Sindhu Cherian Jonni Moore Andrew Bantly Jo-Anne Vergilio Peter Klein Selina Luger Adam Bagg

Cytometry B Clin Cytom 2005 Mar;64(1):9-17

Department of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.

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http://dx.doi.org/10.1002/cyto.b.20041DOI Listing
March 2005

Enhanced marrow [18F]fluorodeoxyglucose uptake related to myeloid hyperplasia in Hodgkin's lymphoma can simulate lymphoma involvement in marrow.

Authors:
Rebecca L Elstrom Donald E Tsai Jo-Anne Vergilio Lisa H Downs Abass Alavi Stephen J Schuster

Clin Lymphoma 2004 Jun;5(1):62-4

Department of Medicine, University of Pennsylvania Medical Center, Philadelphia, 17104, USA.

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http://dx.doi.org/10.3816/clm.2004.n.012DOI Listing
June 2004

Myelodysplastic syndromes. Contemporary biologic concepts and emerging diagnostic approaches.

Authors:
Jo-Anne Vergilio Adam Bagg

Am J Clin Pathol 2003 Jun;119 Suppl:S58-77

Dept of Pathology and Laboratory Medicine, Hospital of the University of Pennsylvania, 7.103 Founders Pavilion, 3400 Spruce St, Philadelphia, PA 19104-4283, USA.

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June 2003

Utility of FDG-PET scanning in lymphoma by WHO classification.

Authors:
Rebecca Elstrom Liang Guan Gary Baker Khozaim Nakhoda Jo-Anne Vergilio Hongming Zhuang Stephanie Pitsilos Adam Bagg Lisa Downs Amit Mehrotra Scott Kim Abass Alavi Stephen J Schuster

Blood 2003 May 16;101(10):3875-6. Epub 2003 Jan 16.

Abramson Family Cancer Research Institute of the University of Pennsylvania, Philadelphia, USA.

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http://www.bloodjournal.org/cgi/doi/10.1182/blood-2002-09-27
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http://dx.doi.org/10.1182/blood-2002-09-2778DOI Listing
May 2003

T cell receptor gamma-chain gene polymerase chain reaction to diagnose central nervous system involvement by cutaneous T cell lymphoma.

Authors:
Robert Taylor Jo-Anne Vergilio Michael Shapiro David Raizen Jennifer Hunt Cindy McGrath Alain Rook Adam Bagg

J Mol Diagn 2002 May;4(2):118-20

Department of Neurology, Hospital of the University of Pennsylvania, 3400 Spruce Street, Philadelphia, PA 19104, USA.

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http://dx.doi.org/10.1016/s1525-1578(10)60691-5DOI Listing
May 2002