Jianxin Ma

Jianxin Ma

UNVERIFIED PROFILE

Are you Jianxin Ma?   Register this Author

Register author
Jianxin Ma

Jianxin Ma

Publications by authors named "Jianxin Ma"

Are you Jianxin Ma?   Register this Author

94Publications

2573Reads

30Profile Views

A Post-domestication Mutation, Dt2, Triggers Systemic Modification of Divergent and Convergent Pathways Modulating Multiple Agronomic Traits in Soybean.

Mol Plant 2019 Oct 29;12(10):1366-1382. Epub 2019 May 29.

Department of Agronomy, Purdue University, West Lafayette, IN 47907, USA; Center for Plant Biology, Purdue University, West Lafayette, IN 47907, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.molp.2019.05.010DOI Listing
October 2019

Rhizobial tRNA-derived small RNAs are signal molecules regulating plant nodulation.

Science 2019 08 25;365(6456):919-922. Epub 2019 Jul 25.

Department of Agronomy, Purdue University, West Lafayette, IN 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1126/science.aav8907DOI Listing
August 2019

RNA sequencing analysis of salt tolerance in soybean (Glycine max).

Genomics 2019 07 4;111(4):629-635. Epub 2018 Apr 4.

Department of Agronomy, Purdue University, West Lafayette, IN 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.ygeno.2018.03.020DOI Listing
July 2019

Genetic dissection of domestication-related traits in soybean through genotyping-by-sequencing of two interspecific mapping populations.

Theor Appl Genet 2019 Apr 3;132(4):1195-1209. Epub 2019 Jan 3.

Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00122-018-3272-6DOI Listing
April 2019

Genomic introgression through interspecific hybridization counteracts genetic bottleneck during soybean domestication.

Genome Biol 2019 01 30;20(1):22. Epub 2019 Jan 30.

Department of Agronomy, Purdue University, West Lafayette, IN, 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s13059-019-1631-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6354408PMC
January 2019

Parallel domestication with a broad mutational spectrum of determinate stem growth habit in leguminous crops.

Plant J 2018 11 26;96(4):761-771. Epub 2018 Sep 26.

Department of Agronomy, Purdue University, West Lafayette, IN, 47907, USA.

View Article

Download full-text PDF

Source
http://doi.wiley.com/10.1111/tpj.14066
Publisher Site
http://dx.doi.org/10.1111/tpj.14066DOI Listing
November 2018

Nutlin-3, an Antagonist of MDM2, Enhances the Radiosensitivity of Esophageal Squamous Cancer with Wild-Type p53.

Pathol Oncol Res 2018 Jan 24;24(1):75-81. Epub 2017 Mar 24.

Department of radiotherapy, The Dongfang Hospital of LianYungang, 57 Zhonghua West Road,Lianyungang, Jiangsu Province, 222000, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s12253-017-0215-5DOI Listing
January 2018

Patterns and Consequences of Subgenome Differentiation Provide Insights into the Nature of Paleopolyploidy in Plants.

Plant Cell 2017 12 27;29(12):2974-2994. Epub 2017 Nov 27.

Department of Agronomy, Purdue University, West Lafayette, Indiana 47907

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1105/tpc.17.00595DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5757279PMC
December 2017

eEF2K promotes progression and radioresistance of esophageal squamous cell carcinoma.

Radiother Oncol 2017 09 19;124(3):439-447. Epub 2017 Apr 19.

Department of Radiation Oncology, The First Affiliated Hospital of Nanjing Medical University, China. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.radonc.2017.04.001DOI Listing
September 2017

Experimental study on water transport observations of desert riparian forests in the lower reaches of the Tarim River in China.

Int J Biometeorol 2017 Jun 11;61(6):1055-1062. Epub 2017 Mar 11.

State Key Laboratory of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, 818 South Beijing Road, Urumqi, Xinjiang, 830011, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00484-016-1285-xDOI Listing
June 2017

Plasticity and innovation of regulatory mechanisms underlying seed oil content mediated by duplicated genes in the palaeopolyploid soybean.

Plant J 2017 Jun 12;90(6):1120-1133. Epub 2017 Apr 12.

Department of Agronomy, Purdue University, West Lafayette, IN, 47906, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/tpj.13533DOI Listing
June 2017

GmILPA1, Encoding an APC8-like Protein, Controls Leaf Petiole Angle in Soybean.

Plant Physiol 2017 Jun 23;174(2):1167-1176. Epub 2017 Mar 23.

Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun 130102, China (J.G., S.Y., J.L., X.Y., X.F.); University of Chinese Academy of Sciences, Beijing 100049, China (J.G.); Maize Research Institute, Shandong Academy of Agricultural Sciences, Jinan 250100, China (W.C.); Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China (Y.F.); Department of Horticulture, Michigan State University, East Lansing, Michigan 48824 (N.J.); and Department of Agronomy, Purdue University, West Lafayette, Indiana 47907 (J.M.)

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1104/pp.16.00074DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5462013PMC
June 2017

Effects of reduced glutathione therapy on chronic hepatitis B.

Cent Eur J Immunol 2017 8;42(1):97-100. Epub 2017 May 8.

Department of Tumour Radiotherapy, The Second People's Hospital of Lianyungang, Haizhou, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.5114/ceji.2016.65894DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5470607PMC
May 2017

Fine mapping and candidate gene analysis of two loci conferring resistance to Phytophthora sojae in soybean.

Theor Appl Genet 2016 Dec 3;129(12):2379-2386. Epub 2016 Sep 3.

Department of Agronomy, Purdue University, West Lafayette, IN, 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00122-016-2777-0DOI Listing
December 2016

Bortezomib enhances the radiosensitivity of hypoxic cervical cancer cells by inhibiting HIF-1α expression.

Int J Clin Exp Pathol 2015 1;8(8):9032-41. Epub 2015 Aug 1.

Department of Radiotherapy, The Second People's Hospital of Lianyungang, Lianyungang Hospital Affiliated to Bengbu Medical College China.

View Article

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4583877PMC
August 2016

Cu(i)-Functionalized SBA-16: an efficient catalyst for the synthesis of α-ketoamides under moderate conditions.

Dalton Trans 2016 Jun 10;45(21):8972-83. Epub 2016 May 10.

Gansu Provincial Engineering Laboratory for Chemical Catalysis, College of Chemistry and Chemical Engineering, Lanzhou University, Lanzhou 730000, PR China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1039/c5dt04969eDOI Listing
June 2016

Identification and molecular mapping of Rps11, a novel gene conferring resistance to Phytophthora sojae in soybean.

Theor Appl Genet 2016 Feb 10;129(2):445-51. Epub 2015 Dec 10.

Department of Agronomy, Purdue University, West Lafayette, IN, 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00122-015-2638-2DOI Listing
February 2016

Innovation of a Regulatory Mechanism Modulating Semi-determinate Stem Growth through Artificial Selection in Soybean.

PLoS Genet 2016 Jan 25;12(1):e1005818. Epub 2016 Jan 25.

Department of Agronomy, Purdue University, West Lafayette, Indiana, United States of America.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1371/journal.pgen.1005818DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4726468PMC
January 2016

[Estimation of excess numbers of viral diarrheal cases among children aged <5 years in Beijing with adjusted Serfling regression model].

Zhonghua Liu Xing Bing Xue Za Zhi 2016 Jan;37(1):102-5

Institute of Infectious Disease and Endemic Disease Control, Beijing Center for Disease Control and Prevention, Beijing 100013, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3760/cma.j.issn.0254-6450.2016.01.022DOI Listing
January 2016

[A community-based seroepidemiological survey of hepatitis B among adults in Chaoyang district, Beijing].

Zhonghua Liu Xing Bing Xue Za Zhi 2015 Oct;36(10):1104-8

Department of Epidemiology and Biostatistics, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, School of Basic Medicine, Peking Union Medical College, Beijing 100005, China; Email:

View Article

Download full-text PDF

Source
October 2015

GmHs1-1, encoding a calcineurin-like protein, controls hard-seededness in soybean.

Nat Genet 2015 Aug 22;47(8):939-43. Epub 2015 Jun 22.

1] Department of Agronomy, Purdue University, West Lafayette, Indiana, USA. [2] College of Life Sciences, Qingdao Agricultural University, Qingdao, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/ng.3339DOI Listing
August 2015

Long-term clinical outcome of intensity-modulated radiation therapy for locally advanced esophageal squamous cell carcinoma.

Tumori 2015 Mar-Apr;101(2):168-73. Epub 2015 Mar 16.

Department of Radiotherapy, The First Affiliated Hospital of Nanjing Medical University, Nanjing - China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.5301/tj.5000234DOI Listing
July 2015

Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean.

Plant Cell 2015 Mar 6;27(3):546-62. Epub 2015 Mar 6.

Department of Agronomy, Purdue University, West Lafayette, Indiana 47906 College of Life Sciences, Qingdao Agricultural University, Qingdao 266109, China

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1105/tpc.15.00048DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4558674PMC
March 2015

Functional evolution of phosphatidylethanolamine binding proteins in soybean and Arabidopsis.

Plant Cell 2015 Feb 6;27(2):323-36. Epub 2015 Feb 6.

State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1105/tpc.114.135103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4456927PMC
February 2015

Influence of the device parameters in ICRBD on SSB-OOFDM signal with reduced guard band.

Authors:
Jianxin Ma

Opt Express 2014 Dec;22(24):29636-54

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1364/OE.22.029636DOI Listing
December 2014

STAT3 inhibitor NSC74859 radiosensitizes esophageal cancer via the downregulation of HIF-1α.

Tumour Biol 2014 Oct 1;35(10):9793-9. Epub 2014 Jul 1.

Department of Radiotherapy, The First Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu Province, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s13277-014-2207-3DOI Listing
October 2014

Melittin enhances radiosensitivity of hypoxic head and neck squamous cell carcinoma by suppressing HIF-1α.

Tumour Biol 2014 Oct 23;35(10):10443-8. Epub 2014 Jul 23.

Department of Radiation Oncology, The First Affiliated Hospital of Nanjing Medical University, 300 Guangzhou Road, Nanjing, 210029, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s13277-014-2218-0DOI Listing
October 2014

De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits.

Nat Biotechnol 2014 Oct 14;32(10):1045-52. Epub 2014 Sep 14.

1] The National Key Facility for Crop Gene Resources and Genetic Improvement (NFCRI), Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, P.R. China. [2] Key Laboratory of Crop Gene Resource and Germplasm Enhancement (MOA), Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, P.R. China. [3] Key Laboratory of Soybean Biology (Beijing) (MOA), Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, P.R. China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nbt.2979DOI Listing
October 2014

Targets and molecular mechanisms of triptolide in cancer therapy.

Chin J Cancer Res 2014 Oct;26(5):622-6

1 Bengbu Medical College, Bengbu 233000, China ; 2 Department of Radiation Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing 210029, China ; 3 Department of Radiation Oncology, Lianyungang No. 2 People's Hospital, Lianyungang 222000, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3978/j.issn.1000-9604.2014.09.01DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4220249PMC
October 2014

Plant genetics. Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome.

Science 2014 Aug 21;345(6199):950-3. Epub 2014 Aug 21.

Commissariat à l'Energie Atomique (CEA), Institut de Génomique (IG), Genoscope, BP5706, 91057 Evry, France. Université d'Evry Val d'Essone, UMR 8030, CP5706, Evry, France. Centre National de Recherche Scientifique (CNRS), UMR 8030, CP5706, Evry, France.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1126/science.1253435DOI Listing
August 2014

Ginsenoside Rg3 enhances radiosensitization of hypoxic oesophageal cancer cell lines through vascular endothelial growth factor and hypoxia inducible factor 1α.

J Int Med Res 2014 Jun 1;42(3):628-40. Epub 2014 Apr 1.

Department of Radiotherapy, The First Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu Province, China

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1177/0300060513505491DOI Listing
June 2014

Berberine inhibits the expression of hypoxia induction factor-1alpha and increases the radiosensitivity of prostate cancer.

Diagn Pathol 2014 May 27;9:98. Epub 2014 May 27.

Department of Radiotherapy, The Second People's Hospital of LianYungang, Lianyungang Hospital Affiliated to Bengbu Medical College, Xingfu Road 161, Lianyungang, Jiangsu Province 222000, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1746-1596-9-98DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4051149PMC
May 2014

Smac mimetic compound LCL161 sensitizes esophageal carcinoma cells to radiotherapy by inhibiting the expression of inhibitor of apoptosis protein.

Tumour Biol 2014 Mar 30;35(3):2565-74. Epub 2013 Oct 30.

Department of Radiation Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, 210029, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s13277-013-1338-2DOI Listing
March 2014

TARE1, a mutated Copia-like LTR retrotransposon followed by recent massive amplification in tomato.

PLoS One 2013 4;8(7):e68587. Epub 2013 Jul 4.

Bioinformatics Group, Institute of Industrial Crops, Jiangsu Academy of Agricultural Sciences, Nanjing, China.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0068587PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3701649PMC
February 2014

Berberine radiosensitizes human nasopharyngeal carcinoma by suppressing hypoxia-inducible factor-1α expression.

Acta Otolaryngol 2014 Feb 10;134(2):185-92. Epub 2013 Dec 10.

Department of Radiotherapy, the First Affiliated Hospital of Nanjing Medical University , Nanjing, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3109/00016489.2013.850176DOI Listing
February 2014

Resveratrol attenuates radiation-induced salivary gland dysfunction in mice.

Laryngoscope 2013 Nov 12;123(11):E23-9. Epub 2013 Jul 12.

The First Clinical Medical College of Nanjing Medical University, Nanjing, Jiangsu Province, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/lary.24276DOI Listing
November 2013

Berberine enhances radiosensitivity of esophageal squamous cancer by targeting HIF-1α in vitro and in vivo.

Cancer Biol Ther 2013 Nov 12;14(11):1068-73. Epub 2013 Sep 12.

Department of Radiotherapy; the First Affiliated Hospital of Nanjing Medical University; Nanjing, PR China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.4161/cbt.26426DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3925662PMC
November 2013

Inverse planning optimization method for intensity modulated radiation therapy.

Technol Cancer Res Treat 2013 Oct 24;12(5):391-401. Epub 2013 Apr 24.

School of Computer and Information Technology, Nanyang Normal University, Nanyang, Henan 473061, P.R.China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.7785/tcrt.2012.500339DOI Listing
October 2013

Shifts in the evolutionary rate and intensity of purifying selection between two Brassica genomes revealed by analyses of orthologous transposons and relics of a whole genome triplication.

Plant J 2013 Oct 26;76(2):211-22. Epub 2013 Aug 26.

Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, Wuhan, 430062, China; Department of Agronomy, Purdue University, West Lafayette, 47907, IN, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/tpj.12291DOI Listing
October 2013

Molecular mapping of two genes conferring resistance to Phytophthora sojae in a soybean landrace PI 567139B.

Theor Appl Genet 2013 Aug 21;126(8):2177-85. Epub 2013 May 21.

Department of Agronomy, Purdue University, West Lafayette, IN 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s00122-013-2127-4DOI Listing
August 2013

Co-evolution of plant LTR-retrotransposons and their host genomes.

Protein Cell 2013 Jul 23;4(7):493-501. Epub 2013 Jun 23.

Department of Agronomy, Purdue University, West Lafayette, IN 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s13238-013-3037-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4875514PMC
July 2013

Dynamic evolution of herbivore-induced sesquiterpene biosynthesis in sorghum and related grass crops.

Plant J 2012 Jan 13;69(1):70-80. Epub 2011 Oct 13.

Department of Plant Sciences, University of Tennessee, Knoxville, TN 37996, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/j.1365-313X.2011.04771.xDOI Listing
January 2012

Pigment epithelium-derived factor inhibits angiogenesis and growth of gastric carcinoma by down-regulation of VEGF.

Oncol Rep 2011 Sep 25;26(3):681-6. Epub 2011 May 25.

Department of Biochemistry, Zhongshan School of Medicine, Sun Yat-sen University, and Department of Medicine, First Affiliated Hospital of Sun Yat-sen University, Guangzhou, PR China.

View Article

Download full-text PDF

Source
http://www.spandidos-publications.com/10.3892/or.2011.1318
Publisher Site
http://dx.doi.org/10.3892/or.2011.1318DOI Listing
September 2011

A fluorescence in situ hybridization system for karyotyping soybean.

Genetics 2010 Jul 26;185(3):727-44. Epub 2010 Apr 26.

Division of Plant Sciences, National Center for Soybean Biotechnology, University of Missouri, Columbia, Missouri 65211, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1534/genetics.109.113753DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2907198PMC
July 2010

On the tetraploid origin of the maize genome.

Comp Funct Genomics 2004 ;5(3):281-4

Waksman Institute of Microbiology, Rutgers University, 190 Frelinghuysen Road, Piscataway, NJ 08854-8020, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/cfg.395DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447450PMC
June 2010

Artificial selection for determinate growth habit in soybean.

Proc Natl Acad Sci U S A 2010 May 26;107(19):8563-8. Epub 2010 Apr 26.

Department of Agronomy, Purdue University, West Lafayette, IN 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.1000088107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2889302PMC
May 2010

SoyTEdb: a comprehensive database of transposable elements in the soybean genome.

BMC Genomics 2010 Feb 17;11:113. Epub 2010 Feb 17.

Department of Agronomy, Purdue University, West Lafayette, IN 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2164-11-113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2830986PMC
February 2010

Bifurcation and enhancement of autonomous-nonautonomous retrotransposon partnership through LTR Swapping in soybean.

Plant Cell 2010 Jan 15;22(1):48-61. Epub 2010 Jan 15.

Department of Agronomy, Purdue University, West Lafayette, Indiana 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1105/tpc.109.068775DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2828711PMC
January 2010

A lineage-specific centromere retrotransposon in Oryza brachyantha.

Plant J 2009 Dec 21;60(5):820-31. Epub 2009 Aug 21.

Molecular and Evolutionary Genetics, Purdue University, 915 W. State Street, West Lafayette, IN 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1111/j.1365-313X.2009.04005.xDOI Listing
December 2009

Molecular and chromosomal evidence for allopolyploidy in soybean.

Plant Physiol 2009 Nov 15;151(3):1167-74. Epub 2009 Jul 15.

Department of Agronomy, Purdue University, West Lafayette, Indiana 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1104/pp.109.137935DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2773056PMC
November 2009

Evolutionary history and positional shift of a rice centromere.

Genetics 2007 Oct 29;177(2):1217-20. Epub 2007 Jul 29.

Department of Agronomy, Purdue University, West Lafayette, Indiana 47907, USA.

View Article

Download full-text PDF

Source
http://www.genetics.org/cgi/doi/10.1534/genetics.107.078709
Publisher Site
http://dx.doi.org/10.1534/genetics.107.078709DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2034625PMC
October 2007

A GeneTrek analysis of the maize genome.

Proc Natl Acad Sci U S A 2007 Jul 5;104(28):11844-9. Epub 2007 Jul 5.

Department of Genetics, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.0704258104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1913904PMC
July 2007

Plant centromere organization: a dynamic structure with conserved functions.

Trends Genet 2007 Mar 1;23(3):134-9. Epub 2007 Feb 1.

Department of Agronomy, Purdue University, West Lafayette, IN 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.tig.2007.01.004DOI Listing
March 2007

Retrotransposon accumulation and satellite amplification mediated by segmental duplication facilitate centromere expansion in rice.

Genome Res 2006 Feb 14;16(2):251-9. Epub 2005 Dec 14.

Department of Agronomy, Purdue University, West Lafayette, IN 47907, USA.

View Article

Download full-text PDF

Source
http://www.genome.org/cgi/doi/10.1101/gr.4583106
Publisher Site
http://dx.doi.org/10.1101/gr.4583106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1361721PMC
February 2006

Recombination, rearrangement, reshuffling, and divergence in a centromeric region of rice.

Proc Natl Acad Sci U S A 2006 Jan 28;103(2):383-8. Epub 2005 Dec 28.

Department of Genetics, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://www.pnas.org/cgi/doi/10.1073/pnas.0509810102
Publisher Site
http://dx.doi.org/10.1073/pnas.0509810102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1326179PMC
January 2006

Analysis and mapping of randomly chosen bacterial artificial chromosome clones from hexaploid bread wheat.

Proc Natl Acad Sci U S A 2005 Dec 15;102(52):19243-8. Epub 2005 Dec 15.

Department of Crop and Soil Sciences, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.0509473102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1323192PMC
December 2005

Gene enrichment in maize with hypomethylated partial restriction (HMPR) libraries.

Genome Res 2005 Oct;15(10):1441-6

Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.3362105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1240087PMC
October 2005

DNA rearrangement in orthologous orp regions of the maize, rice and sorghum genomes.

Genetics 2005 Jul 16;170(3):1209-20. Epub 2005 Apr 16.

Department of Genetics, University of Georgia, Athens, Georgia 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1534/genetics.105.040915DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1451190PMC
July 2005

Mechanisms of recent genome size variation in flowering plants.

Ann Bot 2005 Jan;95(1):127-32

Department of Genetics, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/aob/mci008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4246713PMC
January 2005

Consistent over-estimation of gene number in complex plant genomes.

Curr Opin Plant Biol 2004 Dec;7(6):732-6

Department of Genetics, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.pbi.2004.09.003DOI Listing
December 2004

Close split of sorghum and maize genome progenitors.

Genome Res 2004 Oct;14(10A):1916-23

Waksman Institute of Microbiology, Rutgers University, Piscataway, New Jersey 08854, USA.

View Article

Download full-text PDF

Source
http://www.genome.org/cgi/doi/10.1101/gr.2332504
Publisher Site
http://dx.doi.org/10.1101/gr.2332504DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC524415PMC
October 2004

Rapid recent growth and divergence of rice nuclear genomes.

Proc Natl Acad Sci U S A 2004 Aug 7;101(34):12404-10. Epub 2004 Jul 7.

Department of Genetics, University of Georgia, Athens, GA 30602, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.0403715101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC515075PMC
August 2004

Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice.

Genome Res 2004 May 12;14(5):860-9. Epub 2004 Apr 12.

Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907, USA.

View Article

Download full-text PDF

Source
http://www.genome.org/cgi/doi/10.1101/gr.1466204
Publisher Site
http://dx.doi.org/10.1101/gr.1466204DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC479113PMC
May 2004

The genetic colinearity of rice and other cereals on the basis of genomic sequence analysis.

Curr Opin Plant Biol 2003 Apr;6(2):128-33

Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907-1392, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/s1369-5266(03)00015-3DOI Listing
April 2003