Jiannis Ragoussis

Jiannis Ragoussis

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Jiannis Ragoussis

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Quality control project of NGS HLA genotyping for the 17th International HLA and Immunogenetics Workshop.

Hum Immunol 2019 Apr 6;80(4):228-236. Epub 2019 Feb 6.

Histocompatibility, Immunogenetics, and Disease Profiling Laboratory, Stanford Blood Center, Palo Alto, CA, USA; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.

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http://dx.doi.org/10.1016/j.humimm.2019.01.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6446570PMC
April 2019

Transcript Profiling Using Long-Read Sequencing Technologies.

Methods Mol Biol 2018 ;1783:121-147

Department of Human Genetics, McGill University and Genome Quebec Innovation Centre, McGill University, Montréal, QC, Canada.

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http://link.springer.com/10.1007/978-1-4939-7834-2_6
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http://dx.doi.org/10.1007/978-1-4939-7834-2_6DOI Listing
February 2019

Current and Future Methods for mRNA Analysis: A Drive Toward Single Molecule Sequencing.

Methods Mol Biol 2018 ;1783:209-241

McGill University and Genome Quebec Innovation Centre, Department of Human Genetics, McGill University, Montréal, QC, Canada.

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http://link.springer.com/10.1007/978-1-4939-7834-2_11
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http://dx.doi.org/10.1007/978-1-4939-7834-2_11DOI Listing
February 2019

Regulators of Asymmetric Cell Division in Breast Cancer.

Trends Cancer 2018 12 9;4(12):798-801. Epub 2018 Nov 9.

McGill University and Genome Quebec Innovation Centre, Department of Human Genetics, McGill University, Montreal, QC, Canada.

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http://dx.doi.org/10.1016/j.trecan.2018.10.009DOI Listing
December 2018

Regulators of Asymmetric Cell Division in Breast Cancer.

Trends Cancer 2018 12 9;4(12):798-801. Epub 2018 Nov 9.

McGill University and Genome Quebec Innovation Centre, Department of Human Genetics, McGill University, Montreal, QC, Canada.

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http://dx.doi.org/10.1016/j.trecan.2018.10.009DOI Listing
December 2018

H3.1 K36M mutation in a congenital-onset soft tissue neoplasm.

Pediatr Blood Cancer 2017 Dec 16;64(12). Epub 2017 May 16.

Children's Hospital of Eastern Ontario Research Institute, University of Ottawa, Ottawa, Canada.

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http://dx.doi.org/10.1002/pbc.26633DOI Listing
December 2017

Identification of genes expressed in a mesenchymal subset regulating prostate organogenesis using tissue and single cell transcriptomics.

Sci Rep 2017 11 27;7(1):16385. Epub 2017 Nov 27.

Department of Surgery, Division of Urology, Cancer Research Program, McGill University Health Centre, 1001 Decarie Boulevard, Montreal, Quebec, H4A 3J1, Canada.

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http://dx.doi.org/10.1038/s41598-017-16685-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5703996PMC
November 2017

A Targetable EGFR-Dependent Tumor-Initiating Program in Breast Cancer.

Cell Rep 2017 Oct;21(5):1140-1149

Department of Human Genetics, McGill University, Montréal, QC H3A 0C7, Canada; McGill University and Genome Québec Innovation Centre, Montréal, QC H3A 1A4, Canada; Center of Innovation in Personalized Medicine, Cancer and Mutagen Unit, King Fahd Center for Medical Research, Department of Biochemistry, King Abdulaziz University, Jeddah, Saudi Arabia. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2017.10.015DOI Listing
October 2017

The empress of subterfuge: cancer of the fallopian tube presenting with malapropism.

Lancet 2017 Sep;390(10098):1003-1004

Department of Human Genetics, McGill University and Genome Quebec Innovation Centre, Montreal, QC, Canada.

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http://dx.doi.org/10.1016/S0140-6736(17)31586-6DOI Listing
September 2017

[Corrigendum] Weighted gene co-expression network analysis of colorectal cancer liver metastasis genome sequencing data and screening of anti-metastasis drugs.

Int J Oncol 2017 Jan 6;50(1):339. Epub 2016 Oct 6.

Department of Pathology, The Research Institute of McGill University Health Center, Montreal, Québec H4A 3J1, Canada.

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http://dx.doi.org/10.3892/ijo.2016.3722DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5182005PMC
January 2017

RNA Sequencing Reveals that Kaposi Sarcoma-Associated Herpesvirus Infection Mimics Hypoxia Gene Expression Signature.

PLoS Pathog 2017 01 3;13(1):e1006143. Epub 2017 Jan 3.

HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.

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http://dx.doi.org/10.1371/journal.ppat.1006143DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5234848PMC
January 2017

Deep Sequencing Reveals Spatially Distributed Distinct Hot Spot Mutations in DICER1-Related Multinodular Goiter.

J Clin Endocrinol Metab 2016 10 26;101(10):3637-3645. Epub 2016 Jul 26.

Departments of Human Genetics (L.d.K., M.K.W., W.D.F.), Pathology (I.B.), Oncology (W.D.F.), McGill University; Department of Medical Genetics, Lady Davis Institute, Segal Cancer Centre, Jewish General Hospital (L.d.K., M.K.W., N.S., W.D.F.); Research Institute of the McGill University Health Centre (L.d.K., W.D.F.); McGill University and Genome Québec Innovation Centre (T.R., P.B., J.R.), Montréal, Québec, Canada; and (J.R.P.), Minneapolis, Minnesota, USA.

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http://dx.doi.org/10.1210/jc.2016-1328DOI Listing
October 2016

Weighted gene co-expression network analysis of colorectal cancer liver metastasis genome sequencing data and screening of anti-metastasis drugs.

Int J Oncol 2016 09 30;49(3):1108-18. Epub 2016 Jun 30.

Department of Pathology, The Research Institute of McGill University Health Center, Montreal, Québec H4A 3J1, Canada.

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http://dx.doi.org/10.3892/ijo.2016.3591DOI Listing
September 2016

Benchmarking of the Oxford Nanopore MinION sequencing for quantitative and qualitative assessment of cDNA populations.

Sci Rep 2016 08 24;6:31602. Epub 2016 Aug 24.

McGill University and Genome Quebec Innovation Centre, Department of Human Genetics, 740 Dr. Penfield Avenue, McGill University, Montréal, Québec, Canada.

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http://www.nature.com/articles/srep31602
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http://dx.doi.org/10.1038/srep31602DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4995519PMC
August 2016

Live single-cell laser tag.

Nat Commun 2016 05 20;7:11636. Epub 2016 May 20.

Research Center of the Maisonneuve-Rosemont Hospital, Montreal, Quebec, Canada.

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http://dx.doi.org/10.1038/ncomms11636DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4876456PMC
May 2016

Next-Generation Sequencing Analysis Reveals Differential Expression Profiles of MiRNA-mRNA Target Pairs in KSHV-Infected Cells.

PLoS One 2015 5;10(5):e0126439. Epub 2015 May 5.

HIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0126439PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4420468PMC
April 2016

High-sensitivity sequencing reveals multi-organ somatic mosaicism causing DICER1 syndrome.

J Med Genet 2016 Jan 16;53(1):43-52. Epub 2015 Oct 16.

Department of Human Genetics, McGill University, Montréal, Québec, Canada Lady Davis Institute, Segal Cancer Centre, Jewish General Hospital, Montréal, Québec, Canada Department of Medical Genetics, Research Institute of the McGill University Health Centre, Montréal, Québec, Canada Program in Cancer Genetics, Department of Oncology and Human Genetics, McGill University, Montréal, Québec, Canada.

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http://dx.doi.org/10.1136/jmedgenet-2015-103428DOI Listing
January 2016

Estrogen receptor-α directly regulates the hypoxia-inducible factor 1 pathway associated with antiestrogen response in breast cancer.

Proc Natl Acad Sci U S A 2015 Dec 23;112(49):15172-7. Epub 2015 Nov 23.

Growth Factor Group, Cancer Research UK, Molecular Oncology Laboratories, Weatherall Institute of Molecular Medicine, University of Oxford, John Radcliffe Hospital, Headington, Oxford OX3 9DS, United Kingdom;

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http://dx.doi.org/10.1073/pnas.1422015112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4679044PMC
December 2015

De novo point mutations in patients diagnosed with ataxic cerebral palsy.

Brain 2015 Jul 16;138(Pt 7):1817-32. Epub 2015 May 16.

4 Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford OX3 9DU, UK 16 Department of Clinical Genetics, Churchill Hospital, Oxford University Hospitals NHS Trust, Oxford, OX3 7LJ, UK

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http://dx.doi.org/10.1093/brain/awv117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4572487PMC
July 2015

Biomarker discovery: quantification of microRNAs and other small non-coding RNAs using next generation sequencing.

BMC Med Genomics 2015 Jul 1;8:35. Epub 2015 Jul 1.

McGill Group for Suicide Studies (MGSS), Douglas Mental Health University Institute, McGill University, Frank B Common Pavilion, Room F-2101.2, 6875 LaSalle Boulevard, Montreal, QC, H4H 1R3, Canada.

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http://dx.doi.org/10.1186/s12920-015-0109-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4487992PMC
July 2015

Methods of quantifying microRNAs for hypoxia research: classic and next generation.

Antioxid Redox Signal 2014 Sep 15;21(8):1239-48. Epub 2014 Apr 15.

1 Department of Surgery, Indiana University School of Medicine , Indianapolis, Indiana.

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http://dx.doi.org/10.1089/ars.2013.5716DOI Listing
September 2014

IRF5:RelA interaction targets inflammatory genes in macrophages.

Cell Rep 2014 Sep 21;8(5):1308-17. Epub 2014 Aug 21.

Kennedy Institute of Rheumatology, University of Oxford, Roosevelt Drive, Oxford OX37FY, UK. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2014.07.034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4471814PMC
September 2014

Microarray-based ultra-high resolution discovery of genomic deletion mutations.

BMC Genomics 2014 Mar 22;15:224. Epub 2014 Mar 22.

Department of Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK.

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http://dx.doi.org/10.1186/1471-2164-15-224DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3998191PMC
March 2014

High-resolution analysis of cis-acting regulatory networks at the α-globin locus.

Philos Trans R Soc Lond B Biol Sci 2013 6;368(1620):20120361. Epub 2013 May 6.

MRC Molecular Haematology Unit, Weatherall Institute of Molecular Medicine, Oxford University, Oxford OX3 9DS, UK.

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http://dx.doi.org/10.1098/rstb.2012.0361DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3682726PMC
December 2013

GATA-1 genome-wide occupancy associates with distinct epigenetic profiles in mouse fetal liver erythropoiesis.

Nucleic Acids Res 2013 May 21;41(9):4938-48. Epub 2013 Mar 21.

Division of Molecular Oncology, Biomedical Sciences Research Center "Alexander Fleming", Vari GR16672, Greece.

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http://dx.doi.org/10.1093/nar/gkt167DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3643580PMC
May 2013

Cross-species analysis reveals evolving and conserved features of the nuclear factor κB (NF-κB) proteins.

J Biol Chem 2013 Apr 18;288(16):11546-54. Epub 2013 Mar 18.

Kennedy Institute of Rheumatology, Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences, University of Oxford, London W6 8LH, United Kingdom.

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http://dx.doi.org/10.1074/jbc.M113.451153DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3630861PMC
April 2013

Individual common variants exert weak effects on the risk for autism spectrum disorders.

Authors:
Richard Anney Lambertus Klei Dalila Pinto Joana Almeida Elena Bacchelli Gillian Baird Nadia Bolshakova Sven Bölte Patrick F Bolton Thomas Bourgeron Sean Brennan Jessica Brian Jillian Casey Judith Conroy Catarina Correia Christina Corsello Emily L Crawford Maretha de Jonge Richard Delorme Eftichia Duketis Frederico Duque Annette Estes Penny Farrar Bridget A Fernandez Susan E Folstein Eric Fombonne John Gilbert Christopher Gillberg Joseph T Glessner Andrew Green Jonathan Green Stephen J Guter Elizabeth A Heron Richard Holt Jennifer L Howe Gillian Hughes Vanessa Hus Roberta Igliozzi Suma Jacob Graham P Kenny Cecilia Kim Alexander Kolevzon Vlad Kustanovich Clara M Lajonchere Janine A Lamb Miriam Law-Smith Marion Leboyer Ann Le Couteur Bennett L Leventhal Xiao-Qing Liu Frances Lombard Catherine Lord Linda Lotspeich Sabata C Lund Tiago R Magalhaes Carine Mantoulan Christopher J McDougle Nadine M Melhem Alison Merikangas Nancy J Minshew Ghazala K Mirza Jeff Munson Carolyn Noakes Gudrun Nygren Katerina Papanikolaou Alistair T Pagnamenta Barbara Parrini Tara Paton Andrew Pickles David J Posey Fritz Poustka Jiannis Ragoussis Regina Regan Wendy Roberts Kathryn Roeder Bernadette Roge Michael L Rutter Sabine Schlitt Naisha Shah Val C Sheffield Latha Soorya Inês Sousa Vera Stoppioni Nuala Sykes Raffaella Tancredi Ann P Thompson Susanne Thomson Ana Tryfon John Tsiantis Herman Van Engeland John B Vincent Fred Volkmar J A S Vorstman Simon Wallace Kirsty Wing Kerstin Wittemeyer Shawn Wood Danielle Zurawiecki Lonnie Zwaigenbaum Anthony J Bailey Agatino Battaglia Rita M Cantor Hilary Coon Michael L Cuccaro Geraldine Dawson Sean Ennis Christine M Freitag Daniel H Geschwind Jonathan L Haines Sabine M Klauck William M McMahon Elena Maestrini Judith Miller Anthony P Monaco Stanley F Nelson John I Nurnberger Guiomar Oliveira Jeremy R Parr Margaret A Pericak-Vance Joseph Piven Gerard D Schellenberg Stephen W Scherer Astrid M Vicente Thomas H Wassink Ellen M Wijsman Catalina Betancur Joseph D Buxbaum Edwin H Cook Louise Gallagher Michael Gill Joachim Hallmayer Andrew D Paterson James S Sutcliffe Peter Szatmari Veronica J Vieland Hakon Hakonarson Bernie Devlin

Hum Mol Genet 2012 Nov 26;21(21):4781-92. Epub 2012 Jul 26.

Autism Genetics Group, Department of Psychiatry, School of Medicine, Trinity College, Dublin 8, Ireland.

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http://dx.doi.org/10.1093/hmg/dds301DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3471395PMC
November 2012

A novel approach of homozygous haplotype sharing identifies candidate genes in autism spectrum disorder.

Authors:
Jillian P Casey Tiago Magalhaes Judith M Conroy Regina Regan Naisha Shah Richard Anney Denis C Shields Brett S Abrahams Joana Almeida Elena Bacchelli Anthony J Bailey Gillian Baird Agatino Battaglia Tom Berney Nadia Bolshakova Patrick F Bolton Thomas Bourgeron Sean Brennan Phil Cali Catarina Correia Christina Corsello Marc Coutanche Geraldine Dawson Maretha de Jonge Richard Delorme Eftichia Duketis Frederico Duque Annette Estes Penny Farrar Bridget A Fernandez Susan E Folstein Suzanne Foley Eric Fombonne Christine M Freitag John Gilbert Christopher Gillberg Joseph T Glessner Jonathan Green Stephen J Guter Hakon Hakonarson Richard Holt Gillian Hughes Vanessa Hus Roberta Igliozzi Cecilia Kim Sabine M Klauck Alexander Kolevzon Janine A Lamb Marion Leboyer Ann Le Couteur Bennett L Leventhal Catherine Lord Sabata C Lund Elena Maestrini Carine Mantoulan Christian R Marshall Helen McConachie Christopher J McDougle Jane McGrath William M McMahon Alison Merikangas Judith Miller Fiorella Minopoli Ghazala K Mirza Jeff Munson Stanley F Nelson Gudrun Nygren Guiomar Oliveira Alistair T Pagnamenta Katerina Papanikolaou Jeremy R Parr Barbara Parrini Andrew Pickles Dalila Pinto Joseph Piven David J Posey Annemarie Poustka Fritz Poustka Jiannis Ragoussis Bernadette Roge Michael L Rutter Ana F Sequeira Latha Soorya Inês Sousa Nuala Sykes Vera Stoppioni Raffaella Tancredi Maïté Tauber Ann P Thompson Susanne Thomson John Tsiantis Herman Van Engeland John B Vincent Fred Volkmar Jacob A S Vorstman Simon Wallace Kai Wang Thomas H Wassink Kathy White Kirsty Wing Kerstin Wittemeyer Brian L Yaspan Lonnie Zwaigenbaum Catalina Betancur Joseph D Buxbaum Rita M Cantor Edwin H Cook Hilary Coon Michael L Cuccaro Daniel H Geschwind Jonathan L Haines Joachim Hallmayer Anthony P Monaco John I Nurnberger Margaret A Pericak-Vance Gerard D Schellenberg Stephen W Scherer James S Sutcliffe Peter Szatmari Veronica J Vieland Ellen M Wijsman Andrew Green Michael Gill Louise Gallagher Astrid Vicente Sean Ennis

Hum Genet 2012 Apr 14;131(4):565-79. Epub 2011 Oct 14.

School of Medicine and Medical Science University College, Dublin, Ireland.

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http://researchrepository.ucd.ie/bitstream/handle/10197/6163
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http://link.springer.com/10.1007/s00439-011-1094-6
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http://dx.doi.org/10.1007/s00439-011-1094-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3303079PMC
April 2012

Algorithm implementation for CNV discovery using Affymetrix and Illumina SNP array data.

Methods Mol Biol 2012 ;838:291-310

Wellcome Trust Centre for Human Genetics, Oxford University, Oxford, UK.

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http://dx.doi.org/10.1007/978-1-61779-507-7_14DOI Listing
April 2012

Principles of dimer-specific gene regulation revealed by a comprehensive characterization of NF-κB family DNA binding.

Nat Immunol 2011 Nov 20;13(1):95-102. Epub 2011 Nov 20.

Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1038/ni.2151DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3242931PMC
November 2011

microRNA-associated progression pathways and potential therapeutic targets identified by integrated mRNA and microRNA expression profiling in breast cancer.

Cancer Res 2011 Sep 7;71(17):5635-45. Epub 2011 Jul 7.

Oncology Department, Weatherall Institute of Molecular Medicine, University of Oxford and Genomics Research, Wellcome Trust Centre for Human Genetics, Oxford, UK.

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http://cancerres.aacrjournals.org/cgi/doi/10.1158/0008-5472.
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http://dx.doi.org/10.1158/0008-5472.CAN-11-0489DOI Listing
September 2011

The role of hypoxia regulated microRNAs in cancer.

Curr Top Microbiol Immunol 2010 ;345:47-70

Molecular Oncology Laboratories, Weatherall Institute of Molecular Medicine, University of Oxford, John Radcliffe Hospital, Oxford, OX3 9DS, UK.

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http://dx.doi.org/10.1007/82_2010_76DOI Listing
November 2010

A genome-wide scan for common alleles affecting risk for autism.

Authors:
Richard Anney Lambertus Klei Dalila Pinto Regina Regan Judith Conroy Tiago R Magalhaes Catarina Correia Brett S Abrahams Nuala Sykes Alistair T Pagnamenta Joana Almeida Elena Bacchelli Anthony J Bailey Gillian Baird Agatino Battaglia Tom Berney Nadia Bolshakova Sven Bölte Patrick F Bolton Thomas Bourgeron Sean Brennan Jessica Brian Andrew R Carson Guillermo Casallo Jillian Casey Su H Chu Lynne Cochrane Christina Corsello Emily L Crawford Andrew Crossett Geraldine Dawson Maretha de Jonge Richard Delorme Irene Drmic Eftichia Duketis Frederico Duque Annette Estes Penny Farrar Bridget A Fernandez Susan E Folstein Eric Fombonne Christine M Freitag John Gilbert Christopher Gillberg Joseph T Glessner Jeremy Goldberg Jonathan Green Stephen J Guter Hakon Hakonarson Elizabeth A Heron Matthew Hill Richard Holt Jennifer L Howe Gillian Hughes Vanessa Hus Roberta Igliozzi Cecilia Kim Sabine M Klauck Alexander Kolevzon Olena Korvatska Vlad Kustanovich Clara M Lajonchere Janine A Lamb Magdalena Laskawiec Marion Leboyer Ann Le Couteur Bennett L Leventhal Anath C Lionel Xiao-Qing Liu Catherine Lord Linda Lotspeich Sabata C Lund Elena Maestrini William Mahoney Carine Mantoulan Christian R Marshall Helen McConachie Christopher J McDougle Jane McGrath William M McMahon Nadine M Melhem Alison Merikangas Ohsuke Migita Nancy J Minshew Ghazala K Mirza Jeff Munson Stanley F Nelson Carolyn Noakes Abdul Noor Gudrun Nygren Guiomar Oliveira Katerina Papanikolaou Jeremy R Parr Barbara Parrini Tara Paton Andrew Pickles Joseph Piven David J Posey Annemarie Poustka Fritz Poustka Aparna Prasad Jiannis Ragoussis Katy Renshaw Jessica Rickaby Wendy Roberts Kathryn Roeder Bernadette Roge Michael L Rutter Laura J Bierut John P Rice Jeff Salt Katherine Sansom Daisuke Sato Ricardo Segurado Lili Senman Naisha Shah Val C Sheffield Latha Soorya Inês Sousa Vera Stoppioni Christina Strawbridge Raffaella Tancredi Katherine Tansey Bhooma Thiruvahindrapduram Ann P Thompson Susanne Thomson Ana Tryfon John Tsiantis Herman Van Engeland John B Vincent Fred Volkmar Simon Wallace Kai Wang Zhouzhi Wang Thomas H Wassink Kirsty Wing Kerstin Wittemeyer Shawn Wood Brian L Yaspan Danielle Zurawiecki Lonnie Zwaigenbaum Catalina Betancur Joseph D Buxbaum Rita M Cantor Edwin H Cook Hilary Coon Michael L Cuccaro Louise Gallagher Daniel H Geschwind Michael Gill Jonathan L Haines Judith Miller Anthony P Monaco John I Nurnberger Andrew D Paterson Margaret A Pericak-Vance Gerard D Schellenberg Stephen W Scherer James S Sutcliffe Peter Szatmari Astrid M Vicente Veronica J Vieland Ellen M Wijsman Bernie Devlin Sean Ennis Joachim Hallmayer

Hum Mol Genet 2010 Oct 27;19(20):4072-82. Epub 2010 Jul 27.

Department of Psychiatry, School of Medicine, Trinity College, Dublin 8, Ireland.

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http://hmg.oxfordjournals.org/content/19/20/4072.full.pdf
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http://www.hmg.oxfordjournals.org/cgi/doi/10.1093/hmg/ddq307
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http://dx.doi.org/10.1093/hmg/ddq307DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2947401PMC
October 2010

Chemokine gene expression in lung CD8 T cells correlates with protective immunity in mice immunized intra-nasally with Adenovirus-85A.

BMC Med Genomics 2010 Oct 13;3:46. Epub 2010 Oct 13.

Nuffield Department of Medicine, University of Oxford, The Peter Medawar Building for Pathogen Research, South Parks Road, Oxford OX1 3SY, UK.

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http://dx.doi.org/10.1186/1755-8794-3-46DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2967494PMC
October 2010

The histone demethylase JMJD2B is regulated by estrogen receptor alpha and hypoxia, and is a key mediator of estrogen induced growth.

Cancer Res 2010 Aug 3;70(16):6456-66. Epub 2010 Aug 3.

Growth Factor Group, Cancer Research UK, Molecular Oncology Laboratories, Weatherall Institute of Molecular Medicine, University of Oxford, John Radcliffe Hospital, Headington, United Kingdom.

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http://dx.doi.org/10.1158/0008-5472.CAN-10-0413DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4261152PMC
August 2010

Functional impact of global rare copy number variation in autism spectrum disorders.

Authors:
Dalila Pinto Alistair T Pagnamenta Lambertus Klei Richard Anney Daniele Merico Regina Regan Judith Conroy Tiago R Magalhaes Catarina Correia Brett S Abrahams Joana Almeida Elena Bacchelli Gary D Bader Anthony J Bailey Gillian Baird Agatino Battaglia Tom Berney Nadia Bolshakova Sven Bölte Patrick F Bolton Thomas Bourgeron Sean Brennan Jessica Brian Susan E Bryson Andrew R Carson Guillermo Casallo Jillian Casey Brian H Y Chung Lynne Cochrane Christina Corsello Emily L Crawford Andrew Crossett Cheryl Cytrynbaum Geraldine Dawson Maretha de Jonge Richard Delorme Irene Drmic Eftichia Duketis Frederico Duque Annette Estes Penny Farrar Bridget A Fernandez Susan E Folstein Eric Fombonne Christine M Freitag John Gilbert Christopher Gillberg Joseph T Glessner Jeremy Goldberg Andrew Green Jonathan Green Stephen J Guter Hakon Hakonarson Elizabeth A Heron Matthew Hill Richard Holt Jennifer L Howe Gillian Hughes Vanessa Hus Roberta Igliozzi Cecilia Kim Sabine M Klauck Alexander Kolevzon Olena Korvatska Vlad Kustanovich Clara M Lajonchere Janine A Lamb Magdalena Laskawiec Marion Leboyer Ann Le Couteur Bennett L Leventhal Anath C Lionel Xiao-Qing Liu Catherine Lord Linda Lotspeich Sabata C Lund Elena Maestrini William Mahoney Carine Mantoulan Christian R Marshall Helen McConachie Christopher J McDougle Jane McGrath William M McMahon Alison Merikangas Ohsuke Migita Nancy J Minshew Ghazala K Mirza Jeff Munson Stanley F Nelson Carolyn Noakes Abdul Noor Gudrun Nygren Guiomar Oliveira Katerina Papanikolaou Jeremy R Parr Barbara Parrini Tara Paton Andrew Pickles Marion Pilorge Joseph Piven Chris P Ponting David J Posey Annemarie Poustka Fritz Poustka Aparna Prasad Jiannis Ragoussis Katy Renshaw Jessica Rickaby Wendy Roberts Kathryn Roeder Bernadette Roge Michael L Rutter Laura J Bierut John P Rice Jeff Salt Katherine Sansom Daisuke Sato Ricardo Segurado Ana F Sequeira Lili Senman Naisha Shah Val C Sheffield Latha Soorya Inês Sousa Olaf Stein Nuala Sykes Vera Stoppioni Christina Strawbridge Raffaella Tancredi Katherine Tansey Bhooma Thiruvahindrapduram Ann P Thompson Susanne Thomson Ana Tryfon John Tsiantis Herman Van Engeland John B Vincent Fred Volkmar Simon Wallace Kai Wang Zhouzhi Wang Thomas H Wassink Caleb Webber Rosanna Weksberg Kirsty Wing Kerstin Wittemeyer Shawn Wood Jing Wu Brian L Yaspan Danielle Zurawiecki Lonnie Zwaigenbaum Joseph D Buxbaum Rita M Cantor Edwin H Cook Hilary Coon Michael L Cuccaro Bernie Devlin Sean Ennis Louise Gallagher Daniel H Geschwind Michael Gill Jonathan L Haines Joachim Hallmayer Judith Miller Anthony P Monaco John I Nurnberger Andrew D Paterson Margaret A Pericak-Vance Gerard D Schellenberg Peter Szatmari Astrid M Vicente Veronica J Vieland Ellen M Wijsman Stephen W Scherer James S Sutcliffe Catalina Betancur

Nature 2010 Jul 9;466(7304):368-72. Epub 2010 Jun 9.

The Centre for Applied Genomics and Program in Genetics and Genomic Biology, The Hospital for Sick Children, Toronto, Ontario M5G 1L7, Canada.

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http://dx.doi.org/10.1038/nature09146DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3021798PMC
July 2010

hsa-mir-210 is a marker of tumor hypoxia and a prognostic factor in head and neck cancer.

Cancer 2010 May;116(9):2148-58

Cancer Research UK Molecular Oncology Laboratories, Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.

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May 2010

Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.

Immunity 2010 Mar 4;32(3):317-28. Epub 2010 Mar 4.

Department of Experimental Oncology, European Institute of Oncology (IEO), IFOM-IEO Campus, Via Adamello 16, Milan, Italy.

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http://dx.doi.org/10.1016/j.immuni.2010.02.008DOI Listing
March 2010

Association of the aromatase gene with Alzheimer's disease in women.

Neurosci Lett 2010 Jan 30;468(3):202-6. Epub 2009 Oct 30.

Genomics Laboratory, Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford OX3 7BN, UK.

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http://dx.doi.org/10.1016/j.neulet.2009.10.089DOI Listing
January 2010

Genotyping technologies for genetic research.

Annu Rev Genomics Hum Genet 2009 ;10:117-33

Genomics Laboratory, Wellcome Trust Centre for Human Genetics, Oxford University, Oxford OX3 7BN, United Kingdom.

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http://dx.doi.org/10.1146/annurev-genom-082908-150116DOI Listing
October 2009

Comparing CNV detection methods for SNP arrays.

Brief Funct Genomic Proteomic 2009 Sep 8;8(5):353-66. Epub 2009 Sep 8.

Oxford University, Oxford, UK.

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http://dx.doi.org/10.1093/bfgp/elp017DOI Listing
September 2009

Molecular analysis of FOXC1 in subjects presenting with severe developmental eye anomalies.

Mol Vis 2009 Jul 13;15:1366-73. Epub 2009 Jul 13.

University of Oxford, Wellcome Trust Centre for Human Genetics, Roosevelt Drive, Oxford, UK.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2713731PMC
July 2009

Genome-wide and fine-resolution association analysis of malaria in West Africa.

Nat Genet 2009 Jun 24;41(6):657-65. Epub 2009 May 24.

MRC Laboratories, Fajara, Banjul, Gambia.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2889040PMC
June 2009

Association of the KIAA0319 dyslexia susceptibility gene with reading skills in the general population.

Am J Psychiatry 2008 Dec 1;165(12):1576-84. Epub 2008 Oct 1.

Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, OX3 7BN Oxford, UK.

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http://dx.doi.org/10.1176/appi.ajp.2008.07121872DOI Listing
December 2008

GenoSNP: a variational Bayes within-sample SNP genotyping algorithm that does not require a reference population.

Bioinformatics 2008 Oct 24;24(19):2209-14. Epub 2008 Jul 24.

Department of Statistics, University of Oxford, 1 South Parks Road, Oxford OX13TG, UK.

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http://dx.doi.org/10.1093/bioinformatics/btn386DOI Listing
October 2008

A commonly occurring polymorphism upstream of the estrogen receptor alpha alters transcription and is associated with increased HDL.

Atherosclerosis 2008 Aug 21;199(2):354-61. Epub 2008 Feb 21.

Department of Cardiovascular Medicine, Wellcome Trust Centre for Human Genetics, University of Oxford, UK.

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http://dx.doi.org/10.1016/j.atherosclerosis.2008.02.012DOI Listing
August 2008

Evaluating the effects of imputation on the power, coverage, and cost efficiency of genome-wide SNP platforms.

Am J Hum Genet 2008 Jul 26;83(1):112-9. Epub 2008 Jun 26.

The Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, OX3 7BN Oxford, UK.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2443836PMC
July 2008

BeadArray-based genotyping.

Methods Mol Biol 2008 ;439:53-74

Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK.

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http://dx.doi.org/10.1007/978-1-59745-188-8_4DOI Listing
June 2008