Jia L Song

Jia L Song

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Jia L Song

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Analysis of microRNA functions.

Methods Cell Biol 2019 11;151:323-334. Epub 2018 Dec 11.

Department of Biological Sciences, University of Delaware, Newark, DE, United States. Electronic address:

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http://dx.doi.org/10.1016/bs.mcb.2018.10.005DOI Listing
July 2019

The small GTPase Arf6 regulates sea urchin morphogenesis.

Differentiation 2017 May - Jun;95:31-43. Epub 2017 Feb 2.

Department of Biological Sciences, University of Delaware, Newark, DE 19716, United States. Electronic address:

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http://dx.doi.org/10.1016/j.diff.2017.01.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5462882PMC
March 2018

Function and regulation of microRNA-31 in development and disease.

Mol Reprod Dev 2016 08 2;83(8):654-74. Epub 2016 Aug 2.

Department of Biological Sciences, University of Delaware, Newark, Delaware.

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http://dx.doi.org/10.1002/mrd.22678DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6040227PMC
August 2016

microRNA-31 modulates skeletal patterning in the sea urchin embryo.

Development 2015 Nov 23;142(21):3769-80. Epub 2015 Sep 23.

Department of Biological Sciences, University of Delaware, Newark, DE 19716, USA

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http://dx.doi.org/10.1242/dev.127969DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4647217PMC
November 2015

microRNA regulation of Wnt signaling pathways in development and disease.

Cell Signal 2015 Jul 2;27(7):1380-91. Epub 2015 Apr 2.

Department of Biological Sciences, University of Delaware, Newark, DE 19716, USA.

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http://dx.doi.org/10.1016/j.cellsig.2015.03.018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4437805PMC
July 2015

microRNAs regulate β-catenin of the Wnt signaling pathway in early sea urchin development.

Dev Biol 2015 Jun 19;402(1):127-41. Epub 2015 Jan 19.

Department of Biological Sciences, University of Delaware, 323 Wolf Hall, Newark, DE 19716, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ydbio.2015.01.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4433612PMC
June 2015

High throughput microinjections of sea urchin zygotes.

J Vis Exp 2014 Jan 21(83):e50841. Epub 2014 Jan 21.

Department of Biological Sciences, University of Delaware.

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http://dx.doi.org/10.3791/50841DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4089436PMC
January 2014

The 3'UTR of nanos2 directs enrichment in the germ cell lineage of the sea urchin.

Dev Biol 2013 May 25;377(1):275-83. Epub 2013 Jan 25.

Department of Molecular and Cell Biology and Biochemistry, Brown University, 185 Meeting Street, Providence, RI 02912, USA.

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http://dx.doi.org/10.1016/j.ydbio.2013.01.019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3641670PMC
May 2013

The forkhead transcription factor FoxY regulates Nanos.

Mol Reprod Dev 2012 Oct 15;79(10):680-8. Epub 2012 Aug 15.

Department of Molecular Biology, Cellular Biology and Biochemistry, Brown University, Providence, Rhode Island 02912, USA.

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http://doi.wiley.com/10.1002/mrd.22073
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http://dx.doi.org/10.1002/mrd.22073DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3473121PMC
October 2012

Select microRNAs are essential for early development in the sea urchin.

Dev Biol 2012 Feb 3;362(1):104-13. Epub 2011 Dec 3.

Department of Molecular Biology, Cellular Biology and Biochemistry, Brown University, Providence, RI 02912, USA.

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http://dx.doi.org/10.1016/j.ydbio.2011.11.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3254792PMC
February 2012

Vasa protein expression is restricted to the small micromeres of the sea urchin, but is inducible in other lineages early in development.

Dev Biol 2008 Feb 14;314(2):276-86. Epub 2008 Jan 14.

Providence Institute of Molecular Oogenesis, Department of Molecular Biology, Cell Biology and Biochemistry, 185 Meeting Street, Box G, Brown University, Providence, RI 02912, USA.

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http://dx.doi.org/10.1016/j.ydbio.2007.11.039DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2692673PMC
February 2008

cis-Acting elements within the Candida albicans ERG11 promoter mediate the azole response through transcription factor Upc2p.

Eukaryot Cell 2007 Dec 19;6(12):2231-9. Epub 2007 Oct 19.

Department of Pathobiology, School of Public Health and Community Medicine, University of Washington, and Seattle Biomedical Research Institute, Seattle, Washington 98109-5219, USA.

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http://dx.doi.org/10.1128/EC.00331-06DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2168239PMC
December 2007

Genes involved in the RNA interference pathway are differentially expressed during sea urchin development.

Dev Dyn 2007 Nov;236(11):3180-90

Department of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, Rhode Island 02912, USA.

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http://dx.doi.org/10.1002/dvdy.21353DOI Listing
November 2007

Oogenesis: single cell development and differentiation.

Dev Biol 2006 Dec 5;300(1):385-405. Epub 2006 Aug 5.

Department of Molecular and Cellular Biology and Biochemistry, Box G, Brown University, Providence, RI 02912, USA.

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http://dx.doi.org/10.1016/j.ydbio.2006.07.041DOI Listing
December 2006

The genome of the sea urchin Strongylocentrotus purpuratus.

Authors:
Erica Sodergren George M Weinstock Eric H Davidson R Andrew Cameron Richard A Gibbs Robert C Angerer Lynne M Angerer Maria Ina Arnone David R Burgess Robert D Burke James A Coffman Michael Dean Maurice R Elphick Charles A Ettensohn Kathy R Foltz Amro Hamdoun Richard O Hynes William H Klein William Marzluff David R McClay Robert L Morris Arcady Mushegian Jonathan P Rast L Courtney Smith Michael C Thorndyke Victor D Vacquier Gary M Wessel Greg Wray Lan Zhang Christine G Elsik Olga Ermolaeva Wratko Hlavina Gretchen Hofmann Paul Kitts Melissa J Landrum Aaron J Mackey Donna Maglott Georgia Panopoulou Albert J Poustka Kim Pruitt Victor Sapojnikov Xingzhi Song Alexandre Souvorov Victor Solovyev Zheng Wei Charles A Whittaker Kim Worley K James Durbin Yufeng Shen Olivier Fedrigo David Garfield Ralph Haygood Alexander Primus Rahul Satija Tonya Severson Manuel L Gonzalez-Garay Andrew R Jackson Aleksandar Milosavljevic Mark Tong Christopher E Killian Brian T Livingston Fred H Wilt Nikki Adams Robert Bellé Seth Carbonneau Rocky Cheung Patrick Cormier Bertrand Cosson Jenifer Croce Antonio Fernandez-Guerra Anne-Marie Genevière Manisha Goel Hemant Kelkar Julia Morales Odile Mulner-Lorillon Anthony J Robertson Jared V Goldstone Bryan Cole David Epel Bert Gold Mark E Hahn Meredith Howard-Ashby Mark Scally John J Stegeman Erin L Allgood Jonah Cool Kyle M Judkins Shawn S McCafferty Ashlan M Musante Robert A Obar Amanda P Rawson Blair J Rossetti Ian R Gibbons Matthew P Hoffman Andrew Leone Sorin Istrail Stefan C Materna Manoj P Samanta Viktor Stolc Waraporn Tongprasit Qiang Tu Karl-Frederik Bergeron Bruce P Brandhorst James Whittle Kevin Berney David J Bottjer Cristina Calestani Kevin Peterson Elly Chow Qiu Autumn Yuan Eran Elhaik Dan Graur Justin T Reese Ian Bosdet Shin Heesun Marco A Marra Jacqueline Schein Michele K Anderson Virginia Brockton Katherine M Buckley Avis H Cohen Sebastian D Fugmann Taku Hibino Mariano Loza-Coll Audrey J Majeske Cynthia Messier Sham V Nair Zeev Pancer David P Terwilliger Cavit Agca Enrique Arboleda Nansheng Chen Allison M Churcher F Hallböök Glen W Humphrey Mohammed M Idris Takae Kiyama Shuguang Liang Dan Mellott Xiuqian Mu Greg Murray Robert P Olinski Florian Raible Matthew Rowe John S Taylor Kristin Tessmar-Raible D Wang Karen H Wilson Shunsuke Yaguchi Terry Gaasterland Blanca E Galindo Herath J Gunaratne Celina Juliano Masashi Kinukawa Gary W Moy Anna T Neill Mamoru Nomura Michael Raisch Anna Reade Michelle M Roux Jia L Song Yi-Hsien Su Ian K Townley Ekaterina Voronina Julian L Wong Gabriele Amore Margherita Branno Euan R Brown Vincenzo Cavalieri Véronique Duboc Louise Duloquin Constantin Flytzanis Christian Gache François Lapraz Thierry Lepage Annamaria Locascio Pedro Martinez Giorgio Matassi Valeria Matranga Ryan Range Francesca Rizzo Eric Röttinger Wendy Beane Cynthia Bradham Christine Byrum Tom Glenn Sofia Hussain Gerard Manning Esther Miranda Rebecca Thomason Katherine Walton Athula Wikramanayke Shu-Yu Wu Ronghui Xu C Titus Brown Lili Chen Rachel F Gray Pei Yun Lee Jongmin Nam Paola Oliveri Joel Smith Donna Muzny Stephanie Bell Joseph Chacko Andrew Cree Stacey Curry Clay Davis Huyen Dinh Shannon Dugan-Rocha Jerry Fowler Rachel Gill Cerrissa Hamilton Judith Hernandez Sandra Hines Jennifer Hume Laronda Jackson Angela Jolivet Christie Kovar Sandra Lee Lora Lewis George Miner Margaret Morgan Lynne V Nazareth Geoffrey Okwuonu David Parker Ling-Ling Pu Rachel Thorn Rita Wright

Science 2006 Nov;314(5801):941-52

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http://dx.doi.org/10.1126/science.1133609DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3159423PMC
November 2006

Drug-induced regulation of the MDR1 promoter in Candida albicans.

Antimicrob Agents Chemother 2005 Jul;49(7):2785-92

Department of Pathobiology, School of Public Health and Community Medicine, University of Washington, Seattle, USA.

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http://dx.doi.org/10.1128/AAC.49.7.2785-2792.2005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1168718PMC
July 2005

How to make an egg: transcriptional regulation in oocytes.

Differentiation 2005 Feb;73(1):1-17

Department of Molecular and Cell Biology and Biochemistry, Brown University, 69 Brown Street, Box G-J4, Providence, RI 02912, USA.

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http://dx.doi.org/10.1111/j.1432-0436.2005.07301005.xDOI Listing
February 2005

The Candida albicans lanosterol 14-alpha-demethylase (ERG11) gene promoter is maximally induced after prolonged growth with antifungal drugs.

Antimicrob Agents Chemother 2004 Apr;48(4):1136-44

Department of Pathobiology, School of Public Health and Community Medicine, University of Washington, and Seattle Biomedical Research Institute, Seattle, Washington 98109, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC375326PMC
http://dx.doi.org/10.1128/aac.48.4.1136-1144.2004DOI Listing
April 2004

Antifungal activity of fluconazole in combination with lovastatin and their effects on gene expression in the ergosterol and prenylation pathways in Candida albicans.

Med Mycol 2003 Oct;41(5):417-25

Department of Pathobiology, School of Public Health and Community Medicine, University of Washington, Seattle, Washington, USA.

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http://dx.doi.org/10.1080/1369378031000137233DOI Listing
October 2003

RAM2: an essential gene in the prenylation pathway of Candida albicans.

Microbiology 2003 Jan;149(Pt 1):249-59

Department of Pathobiology, School of Public Health and Community Medicine, University of Washington, 4 Nickerson St, Suite 200, Seattle, WA 98109-1651, USA.

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http://dx.doi.org/10.1099/mic.0.25887-0DOI Listing
January 2003