Jerome Wojcik

Jerome Wojcik

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Jerome Wojcik

Jerome Wojcik

Publications by authors named "Jerome Wojcik"

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Proteomes of Paired Human Cerebrospinal Fluid and Plasma: Relation to Blood-Brain Barrier Permeability in Older Adults.

Authors:
Loïc Dayon Ornella Cominetti Jérôme Wojcik Antonio Núñez Galindo Aikaterini Oikonomidi Hugues Henry Eugenia Migliavacca Martin Kussmann Gene L Bowman Julius Popp

J Proteome Res 2019 Mar 15;18(3):1162-1174. Epub 2019 Feb 15.

Old Age Psychiatry, Department of Psychiatry , CHUV , 1011 Lausanne , Switzerland.

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http://dx.doi.org/10.1021/acs.jproteome.8b00809DOI Listing
March 2019

Blood-brain barrier breakdown, neuroinflammation, and cognitive decline in older adults.

Authors:
Gene L Bowman Loïc Dayon Richard Kirkland Jérôme Wojcik Gwendoline Peyratout India C Severin Hugues Henry Aikaterini Oikonomidi Eugenia Migliavacca Michael Bacher Julius Popp

Alzheimers Dement 2018 12 14;14(12):1640-1650. Epub 2018 Aug 14.

Old Age Psychiatry, Department of Psychiatry, University Hospital of Lausanne, Lausanne, Switzerland; Geriatric Psychiatry, Department of Mental Health and Psychiatry, University Hospitals of Geneva, Geneva, Switzerland.

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http://dx.doi.org/10.1016/j.jalz.2018.06.2857DOI Listing
December 2018

Plasma Proteomic Profiles of Cerebrospinal Fluid-Defined Alzheimer's Disease Pathology in Older Adults.

Authors:
Loïc Dayon Jérôme Wojcik Antonio Núñez Galindo John Corthésy Ornella Cominetti Aikaterini Oikonomidi Hugues Henry Eugenia Migliavacca Gene L Bowman Julius Popp

J Alzheimers Dis 2017 ;60(4):1641-1652

CHUV, Old Age Psychiatry, Department of Psychiatry, Lausanne, Switzerland.

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http://dx.doi.org/10.3233/JAD-170426DOI Listing
July 2018

Alzheimer disease pathology and the cerebrospinal fluid proteome.

Authors:
Loïc Dayon Antonio Núñez Galindo Jérôme Wojcik Ornella Cominetti John Corthésy Aikaterini Oikonomidi Hugues Henry Martin Kussmann Eugenia Migliavacca India Severin Gene L Bowman Julius Popp

Alzheimers Res Ther 2018 07 18;10(1):66. Epub 2018 Jul 18.

Old Age Psychiatry, Department of Psychiatry, CHUV, Lausanne, Switzerland.

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http://dx.doi.org/10.1186/s13195-018-0397-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6052524PMC
July 2018

Single Nucleotide Polymorphism Clustering in Systemic Autoimmune Diseases.

Authors:
Thomas Charlon Manuel Martínez-Bueno Lara Bossini-Castillo F David Carmona Alessandro Di Cara Jérôme Wojcik Sviatoslav Voloshynovskiy Javier Martín Marta E Alarcón-Riquelme

PLoS One 2016 4;11(8):e0160270. Epub 2016 Aug 4.

Center for Genomics and Oncological Research: Pfizer/University of Granada/Andalusian Government, Granada, Granada, Spain.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0160270PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4973908PMC
July 2017

One-carbon metabolism, cognitive impairment and CSF measures of Alzheimer pathology: homocysteine and beyond.

Authors:
Loïc Dayon Seu Ping Guiraud John Corthésy Laeticia Da Silva Eugenia Migliavacca Domilė Tautvydaitė Aikaterini Oikonomidi Barbara Moullet Hugues Henry Sylviane Métairon Julien Marquis Patrick Descombes Sebastiano Collino François-Pierre J Martin Ivan Montoliu Martin Kussmann Jérôme Wojcik Gene L Bowman Julius Popp

Alzheimers Res Ther 2017 Jun 17;9(1):43. Epub 2017 Jun 17.

Old Age Psychiatry, Department of Psychiatry, Centre Hospitalier Universitaire Vaudois (CHUV), Lausanne, Switzerland.

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http://alzres.biomedcentral.com/articles/10.1186/s13195-017-
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http://dx.doi.org/10.1186/s13195-017-0270-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5473969PMC
June 2017

Markers of neuroinflammation associated with Alzheimer's disease pathology in older adults.

Authors:
Julius Popp Aikaterini Oikonomidi Domilė Tautvydaitė Loïc Dayon Michael Bacher Eugenia Migliavacca Hugues Henry Richard Kirkland India Severin Jérôme Wojcik Gene L Bowman

Brain Behav Immun 2017 May 1;62:203-211. Epub 2017 Feb 1.

Nestlé Institute of Health Sciences, EPFL Campus, Lausanne, Switzerland.

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http://dx.doi.org/10.1016/j.bbi.2017.01.020DOI Listing
May 2017

Validating genetic markers of response to recombinant human growth hormone in children with growth hormone deficiency and Turner syndrome: the PREDICT validation study.

Authors:
Adam Stevens Philip Murray Jerome Wojcik John Raelson Ekaterina Koledova Pierre Chatelain Peter Clayton

Eur J Endocrinol 2016 Dec 20;175(6):633-643. Epub 2016 Sep 20.

Faculty of BiologyMedicine and Health, University of Manchester and Manchester Academic Health Science Centre, Royal Manchester Children's Hospital, Central Manchester University Hospitals NHS Foundation Trust, Manchester, UK

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http://dx.doi.org/10.1530/EJE-16-0357DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5097129PMC
December 2016

GH deficiency status combined with GH receptor polymorphism affects response to GH in children.

Authors:
Armand Valsesia Pierre Chatelain Adam Stevens Valentina A Peterkova Alicia Belgorosky Mohamad Maghnie Franco Antoniazzi Ekaterina Koledova Jerome Wojcik Pierre Farmer Benoit Destenaves Peter Clayton

Eur J Endocrinol 2015 Dec 4;173(6):777-89. Epub 2015 Sep 4.

Merck Serono SAGeneva, SwitzerlandDépartement de PédiatrieHôpital Mère-Enfant, Université Claude Bernard, Lyon, FranceFederal State Institution 'Endocrinology Scientific Center of Russian Medical Technology'Moscow, RussiaEndocrine ServiceHospital de Pediatría Garrahan, Ciudad Autónoma de Buenos Aires, Buenos Aires, ArgentinaIRCCS Istituto Giannina Gaslini di GenovaClinica Pediatrica, Università di Genova, Genova, ItalyPediatra d.U. Azienda Ospedaliera Universitaria IntegrataUniversità di Verona, Verona, ItalyManchester Academic Health Sciences CentreRoyal Manchester Children's Hospital, 5th Floor, Oxford Road, Manchester M13 9WL, UK

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http://dx.doi.org/10.1530/EJE-15-0474DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4623334PMC
December 2015

A genome-wide association study in progressive multiple sclerosis.

Authors:
Filippo Martinelli-Boneschi Federica Esposito Paola Brambilla Eva Lindström Giovanni Lavorgna Jim Stankovich Mariaemma Rodegher Ruggero Capra Angelo Ghezzi Gabriella Coniglio Bruno Colombo Melissa Sorosina Vittorio Martinelli David Booth Annette Bang Oturai Graeme Stewart Hanne F Harbo Trevor John Kilpatrick Jan Hillert Justin P Rubio Hadi Abderrahim Jerome Wojcik Giancarlo Comi

Mult Scler 2012 Oct 28;18(10):1384-94. Epub 2012 Mar 28.

Institute of Experimental Neurology and Department of Neurology, Division of Neuroscience, San Raffaele Scientific Institute, Via Olgettina 58, Milan, Italy.

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http://dx.doi.org/10.1177/1352458512439118DOI Listing
October 2012

Genetic and physical interaction of the B-cell systemic lupus erythematosus-associated genes BANK1 and BLK.

Authors:
Casimiro Castillejo-López Angélica M Delgado-Vega Jerome Wojcik Sergey V Kozyrev Elangovan Thavathiru Ying-Yu Wu Elena Sánchez David Pöllmann Juan R López-Egido Serena Fineschi Nicolás Domínguez Rufei Lu Judith A James Joan T Merrill Jennifer A Kelly Kenneth M Kaufman Kathy L Moser Gary Gilkeson Johan Frostegård Bernardo A Pons-Estel Sandra D'Alfonso Torsten Witte José Luis Callejas John B Harley Patrick M Gaffney Javier Martin Joel M Guthridge Marta E Alarcón-Riquelme

Ann Rheum Dis 2012 Jan 6;71(1):136-42. Epub 2011 Oct 6.

Correspondence to Marta E Alarcón-Riquelme, Arthritis and Clinical Immunology Program, Oklahoma Medical Research Foundation, 825 NE 13th Street, Oklahoma City, OK 73102, USA.

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http://dx.doi.org/10.1136/annrheumdis-2011-200085DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3268679PMC
January 2012

MGAT5 and disease severity in progressive multiple sclerosis.

Authors:
Federica Esposito Jerome Wojcik Mariaemma Rodegher Marta Radaelli Lucia Moiola Angelo Ghezzi Ruggero Capra Paola Brambilla Melissa Sorosina Giacomo Giacalone Vittorio Martinelli Giancarlo Comi Hadi Abderrahim Filippo Martinelli Boneschi

J Neuroimmunol 2011 Jan 27;230(1-2):143-7. Epub 2010 Nov 27.

INSPE and Department of Neurology, Division of Neuroscience, San Raffaele Scientific Institute, 20132 Milan, Italy.

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http://dx.doi.org/10.1016/j.jneuroim.2010.10.026DOI Listing
January 2011

Detecting epistasis with restricted response patterns in pairs of biallelic loci.

Authors:
Pratyaksha Wirapati Karl Forner Angelica Delgado-Vega Marta Alarcón-Riquelme Mauro Delorenzi Jérôme Wojcik

Ann Hum Genet 2011 Jan 30;75(1):133-45. Epub 2010 Nov 30.

Swiss Institute of Bioinformatics, Lausanne, Switzerland.

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http://dx.doi.org/10.1111/j.1469-1809.2010.00625.xDOI Listing
January 2011

Gene-based bin analysis of genome-wide association studies.

Authors:
Nicolas Omont Karl Forner Marc Lamarine Gwendal Martin François Képès Jérôme Wojcik

BMC Proc 2008 Dec 17;2 Suppl 4:S6. Epub 2008 Dec 17.

Merck Serono International S,A, 9 chemin des Mines, 1202 Geneva, Switzerland.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2654974PMC
http://dx.doi.org/10.1186/1753-6561-2-s4-s6DOI Listing
December 2008

ExactFDR: exact computation of false discovery rate estimate in case-control association studies.

Authors:
Jérôme Wojcik Karl Forner

Bioinformatics 2008 Oct 28;24(20):2407-8. Epub 2008 Jul 28.

Department of Bioinformatics, Merck Serono Geneva Research Center, 1202 Geneva, Switzerland.

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http://dx.doi.org/10.1093/bioinformatics/btn379DOI Listing
October 2008

Corrigendum: Functional variants in the B-cell gene BANK1 are associated with systemic lupus erythematosus.

Authors:
Sergey V Kozyrev Anna-Karin Abelson Jerome Wojcik Ammar Zaghlool Mv Prasad Linga Reddy Elena Sanchez Iva Gunnarsson Elisabet Svenungsson Gunnar Sturfelt Andreas Jönsen Lennart Truedsson Bernardo A Pons-Estel Torsten Witte Sandra D'Alfonso Nadia Barrizzone Maria Giovanna Danieli Carmen Gutierrez Ana Suarez Peter Junker Helle Laustrup Maria Francisca González-Escribano Javier Martin Hadi Abderrahim Marta E Alarcón-Riquelme

Nat Genet 2008 Apr;40(4):484

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http://dx.doi.org/10.1038/ng0408-484DOI Listing
April 2008

Universal false discovery rate estimation methodology for genome-wide association studies.

Authors:
Karl Forner Marc Lamarine Mickaël Guedj Jérôme Dauvillier Jérôme Wojcik

Hum Hered 2008 11;65(4):183-94. Epub 2007 Dec 11.

Merck Serono, Geneva Research Center, Geneva, Switzerland.

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http://dx.doi.org/10.1159/000112365DOI Listing
February 2008

Functional variants in the B-cell gene BANK1 are associated with systemic lupus erythematosus.

Authors:
Sergey V Kozyrev Anna-Karin Abelson Jerome Wojcik Ammar Zaghlool M V Prasad Linga Reddy Elena Sanchez Iva Gunnarsson Elisabet Svenungsson Gunnar Sturfelt Andreas Jönsen Lennart Truedsson Bernardo A Pons-Estel Torsten Witte Sandra D'Alfonso Nadia Barizzone Nadia Barrizzone Maria Giovanna Danieli Carmen Gutierrez Ana Suarez Peter Junker Helle Laustrup Maria Francisca González-Escribano Javier Martin Hadi Abderrahim Marta E Alarcón-Riquelme

Nat Genet 2008 Feb 20;40(2):211-6. Epub 2008 Jan 20.

Department of Genetics and Pathology, Rudbeck Laboratory, Uppsala University, Uppsala 75185, Sweden.

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http://www.mc.vanderbilt.edu/microbio/MIM351/Ruley/Kozyrev-2
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http://www.nature.com/doifinder/10.1038/ng.79
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http://dx.doi.org/10.1038/ng.79DOI Listing
February 2008

Five years of progress in the Standardization of Proteomics Data 4th Annual Spring Workshop of the HUPO-Proteomics Standards Initiative April 23-25, 2007 Ecole Nationale Supérieure (ENS), Lyon, France.

Authors:
Sandra Orchard Luisa Montechi-Palazzi Eric W Deutsch Pierre-Alain Binz Andrew R Jones Norman Paton Angel Pizarro David M Creasy Jérôme Wojcik Henning Hermjakob

Proteomics 2007 Oct;7(19):3436-40

EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1002/pmic.200700658DOI Listing
October 2007

Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions.

Authors:
Samuel Kerrien Sandra Orchard Luisa Montecchi-Palazzi Bruno Aranda Antony F Quinn Nisha Vinod Gary D Bader Ioannis Xenarios Jérôme Wojcik David Sherman Mike Tyers John J Salama Susan Moore Arnaud Ceol Andrew Chatr-Aryamontri Matthias Oesterheld Volker Stümpflen Lukasz Salwinski Jason Nerothin Ethan Cerami Michael E Cusick Marc Vidal Michael Gilson John Armstrong Peter Woollard Christopher Hogue David Eisenberg Gianni Cesareni Rolf Apweiler Henning Hermjakob

BMC Biol 2007 Oct 9;5:44. Epub 2007 Oct 9.

European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1186/1741-7007-5-44DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2189715PMC
October 2007

The minimum information required for reporting a molecular interaction experiment (MIMIx).

Authors:
Sandra Orchard Lukasz Salwinski Samuel Kerrien Luisa Montecchi-Palazzi Matthias Oesterheld Volker Stümpflen Arnaud Ceol Andrew Chatr-aryamontri John Armstrong Peter Woollard John J Salama Susan Moore Jérôme Wojcik Gary D Bader Marc Vidal Michael E Cusick Mark Gerstein Anne-Claude Gavin Giulio Superti-Furga Jack Greenblatt Joel Bader Peter Uetz Mike Tyers Pierre Legrain Stan Fields Nicola Mulder Michael Gilson Michael Niepmann Lyle Burgoon Javier De Las Rivas Carlos Prieto Victoria M Perreau Chris Hogue Hans-Werner Mewes Rolf Apweiler Ioannis Xenarios David Eisenberg Gianni Cesareni Henning Hermjakob

Nat Biotechnol 2007 Aug;25(8):894-8

European Molecular Biology Laboratory (EMBL) - European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, UK.

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http://dx.doi.org/10.1038/nbt1324DOI Listing
August 2007

Detecting local high-scoring segments: a first-stage approach for genome-wide association studies.

Authors:
Mickael Guedj David Robelin Mark Hoebeke Marc Lamarine Jérôme Wojcik Gregory Nuel

Stat Appl Genet Mol Biol 2006 17;5:Article22. Epub 2006 Sep 17.

Laboratoire Statistique et Génome.

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http://dx.doi.org/10.2202/1544-6115.1192DOI Listing
December 2006

GenoLink: a graph-based querying and browsing system for investigating the function of genes and proteins.

Authors:
Patrick Durand Laurent Labarre Alain Meil Jean-Louis Divo Yves Vandenbrouck Alain Viari Jérôme Wojcik

BMC Bioinformatics 2006 Jan 17;7:21. Epub 2006 Jan 17.

Hybrigenics SA, 3-5 Impasse Reille, 75014 Paris, France.

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http://dx.doi.org/10.1186/1471-2105-7-21DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1382257PMC
January 2006

PIMWalker: visualising protein interaction networks using the HUPO PSI molecular interaction format.

Authors:
Alain Meil Patrick Durand Jérôme Wojcik

Appl Bioinformatics 2005 ;4(2):137-9

Hybrigenics SA, Paris, France.

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December 2005

Protein interaction mapping: a Drosophila case study.

Authors:
Etienne Formstecher Sandra Aresta Vincent Collura Alexandre Hamburger Alain Meil Alexandra Trehin Céline Reverdy Virginie Betin Sophie Maire Christine Brun Bernard Jacq Monique Arpin Yohanns Bellaiche Saverio Bellusci Philippe Benaroch Michel Bornens Roland Chanet Philippe Chavrier Olivier Delattre Valérie Doye Richard Fehon Gérard Faye Thierry Galli Jean-Antoine Girault Bruno Goud Jean de Gunzburg Ludger Johannes Marie-Pierre Junier Vincent Mirouse Ashim Mukherjee Dora Papadopoulo Franck Perez Anne Plessis Carine Rossé Simon Saule Dominique Stoppa-Lyonnet Alain Vincent Michael White Pierre Legrain Jérôme Wojcik Jacques Camonis Laurent Daviet

Genome Res 2005 Mar 14;15(3):376-84. Epub 2005 Feb 14.

Hybrigenics, 75014 Paris, France.

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http://dx.doi.org/10.1101/gr.2659105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC551564PMC
March 2005

Functional proteomics mapping of a human signaling pathway.

Authors:
Frédéric Colland Xavier Jacq Virginie Trouplin Christelle Mougin Caroline Groizeleau Alexandre Hamburger Alain Meil Jérôme Wojcik Pierre Legrain Jean-Michel Gauthier

Genome Res 2004 Jul;14(7):1324-32

Hybrigenics SA, 75014 Paris, France.

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http://dx.doi.org/10.1101/gr.2334104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC442148PMC
July 2004

Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network.

Authors:
Christine Brun François Chevenet David Martin Jérôme Wojcik Alain Guénoche Bernard Jacq

Genome Biol 2003 15;5(1):R6. Epub 2003 Dec 15.

Laboratoire de Génétique et Physiologie du Développement, CNRS UMR6545, Parc Scientifique et Technologique de Luminy, Case 907, 13288 Marseille Cedex 9, France.

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http://dx.doi.org/10.1186/gb-2003-5-1-r6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC395738PMC
March 2004

The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data.

Authors:
Henning Hermjakob Luisa Montecchi-Palazzi Gary Bader Jérôme Wojcik Lukasz Salwinski Arnaud Ceol Susan Moore Sandra Orchard Ugis Sarkans Christian von Mering Bernd Roechert Sylvain Poux Eva Jung Henning Mersch Paul Kersey Michael Lappe Yixue Li Rong Zeng Debashis Rana Macha Nikolski Holger Husi Christine Brun K Shanker Seth G N Grant Chris Sander Peer Bork Weimin Zhu Akhilesh Pandey Alvis Brazma Bernard Jacq Marc Vidal David Sherman Pierre Legrain Gianni Cesareni Ioannis Xenarios David Eisenberg Boris Steipe Chris Hogue Rolf Apweiler

Nat Biotechnol 2004 Feb;22(2):177-83

European Bioinformatics Institute, EBI-Hinxton, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1038/nbt926DOI Listing
February 2004

Common interchange standards for proteomics data: Public availability of tools and schema.

Authors:
Sandra Orchard Henning Hermjakob Randall K Julian Kai Runte David Sherman Jérôme Wojcik Weimin Zhu Rolf Apweiler

Proteomics 2004 Feb;4(2):490-1

EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

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http://dx.doi.org/10.1002/pmic.200300694DOI Listing
February 2004

Prediction, assessment and validation of protein interaction maps in bacteria.

Authors:
Jérôme Wojcik Ivo G Boneca Pierre Legrain

J Mol Biol 2002 Nov;323(4):763-70

Hybrigenics, SA, 3-5 impasse Reille, Paris, France.

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http://dx.doi.org/10.1016/s0022-2836(02)01009-4DOI Listing
November 2002