Jeremy F Taylor

Jeremy F Taylor

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Jeremy F Taylor

Jeremy F Taylor

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Experimental challenge with bovine respiratory syncytial virus in dairy calves: bronchial lymph node transcriptome response.

Sci Rep 2019 Oct 14;9(1):14736. Epub 2019 Oct 14.

Animal and Bioscience Research Department, Animal & Grassland Research and Innovation Centre, Teagasc, Grange, Co. Meath, Ireland.

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http://dx.doi.org/10.1038/s41598-019-51094-zDOI Listing
October 2019

CRUMBLER: A tool for the prediction of ancestry in cattle.

PLoS One 2019 26;14(8):e0221471. Epub 2019 Aug 26.

Division of Animal Sciences, University of Missouri, Columbia, Missouri, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0221471PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6709893PMC
August 2019

Scans for signatures of selection in Russian cattle breed genomes reveal new candidate genes for environmental adaptation and acclimation.

Sci Rep 2018 08 28;8(1):12984. Epub 2018 Aug 28.

The Federal Research Center Institute of Cytology and Genetics, The Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), 630090, Novosibirsk, Russia.

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http://dx.doi.org/10.1038/s41598-018-31304-wDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6113280PMC
August 2018

Identification of genomic variants causing sperm abnormalities and reduced male fertility.

Anim Reprod Sci 2018 Jul 10;194:57-62. Epub 2018 Feb 10.

Division of Animal Sciences, University of Missouri, Columbia, MO, 65211, USA.

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http://dx.doi.org/10.1016/j.anireprosci.2018.02.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6503949PMC
July 2018

Review: Genomics of bull fertility.

Animal 2018 Jun 5;12(s1):s172-s183. Epub 2018 Apr 5.

1Division of Animal Sciences,University of Missouri,Columbia,MO 65211,USA.

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http://dx.doi.org/10.1017/S1751731118000599DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6550321PMC
June 2018

Genetic diversity and population structure of South African smallholder farmer sheep breeds determined using the OvineSNP50 beadchip.

Trop Anim Health Prod 2017 Dec 16;49(8):1771-1777. Epub 2017 Sep 16.

Department of Animal Sciences, University of Stellenbosch, Private Bag X1, Matieland, Stellenbosch, 7602, South Africa.

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http://dx.doi.org/10.1007/s11250-017-1392-7DOI Listing
December 2017

Candidate lethal haplotypes and causal mutations in Angus cattle.

BMC Genomics 2017 Oct 18;18(1):799. Epub 2017 Oct 18.

Division of Animal Sciences, University of Missouri, Columbia, MO, 65211, USA.

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http://dx.doi.org/10.1186/s12864-017-4196-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5648474PMC
October 2017

Expression of the Bovine NK-Lysin Gene Family and Activity against Respiratory Pathogens.

PLoS One 2016 13;11(7):e0158882. Epub 2016 Jul 13.

Department of Veterinary Pathobiology, College of Veterinary Medicine, Texas A&M University, College Station, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0158882PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4943647PMC
August 2017

Association of single nucleotide polymorphisms in candidate genes previously related to genetic variation in fertility with phenotypic measurements of reproductive function in Holstein cows.

J Dairy Sci 2017 May 2;100(5):3725-3734. Epub 2017 Mar 2.

Department of Animal Sciences, D.H. Barron Reproductive and Perinatal Biology Research Program and Genetics Institute, University of Florida, Gainesville 32611. Electronic address:

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http://dx.doi.org/10.3168/jds.2016-12260DOI Listing
May 2017

A homozygous PIGN missense mutation in Soft-Coated Wheaten Terriers with a canine paroxysmal dyskinesia.

Neurogenetics 2017 01 28;18(1):39-47. Epub 2016 Nov 28.

Department of Veterinary Medicine and Surgery, College of Veterinary Medicine, University of Missouri, Columbia, MO, 65211, USA.

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http://link.springer.com/10.1007/s10048-016-0502-4
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http://dx.doi.org/10.1007/s10048-016-0502-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5243907PMC
January 2017

Holsteins are the genomic selection poster cows.

Proc Natl Acad Sci U S A 2016 07 29;113(28):7690-2. Epub 2016 Jun 29.

Division of Animal Sciences, University of Missouri, Columbia, MO 65211;

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http://dx.doi.org/10.1073/pnas.1608144113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4948318PMC
July 2016

Regulate genome-edited products, not genome editing itself.

Nat Biotechnol 2016 05;34(5):477-9

Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, Minnesota, USA.

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http://dx.doi.org/10.1038/nbt.3566DOI Listing
May 2016

Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs.

Proc Natl Acad Sci U S A 2016 01 22;113(1):152-7. Epub 2015 Dec 22.

Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095; Interdepartmental Program in Bioinformatics, University of California, Los Angeles, CA 90095; Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, CA 90095

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http://dx.doi.org/10.1073/pnas.1512501113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4711855PMC
January 2016

Extent of Linkage Disequilibrium and Effective Population Size in Four South African Sanga Cattle Breeds.

Front Genet 2015 1;6:337. Epub 2015 Dec 1.

Agricultural Research Council-Animal Production Institute Pretoria, South Africa ; Department of Animal, Wildlife and Grassland Sciences, University of Free State Bloemfontein, South Africa.

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http://journal.frontiersin.org/article/10.3389/fgene.2015.00
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http://dx.doi.org/10.3389/fgene.2015.00337DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4664654PMC
December 2015

A simple procedure for directly obtaining haplotype sequences of diploid genomes.

BMC Genomics 2015 Aug 28;16:642. Epub 2015 Aug 28.

Centre for Genome Research, Institute of Integrative Biology, University of Liverpool, Crown St., Liverpool, L69 7ZB, UK.

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http://dx.doi.org/10.1186/s12864-015-1818-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4551521PMC
August 2015

RAPTR-SV: a hybrid method for the detection of structural variants.

Bioinformatics 2015 Jul 16;31(13):2084-90. Epub 2015 Feb 16.

Animal Genomics and Improvement Laboratory, ARS, USDA, Beltsville, MD 20705, USA, Department of Animal and Avian Sciences, University of Maryland, College Park, MD 20705, USA, Division of Animal Sciences, University of Missouri, Columbia, MO 65211, USA and Department of Animal Science, Iowa State University, Ames, IA 50011, USA.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btv086DOI Listing
July 2015

Large-effect pleiotropic or closely linked QTL segregate within and across ten US cattle breeds.

BMC Genomics 2014 Jun 6;15:442. Epub 2014 Jun 6.

Department of Animal Science, Iowa State University, Ames 50011, USA.

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http://dx.doi.org/10.1186/1471-2164-15-442DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4102727PMC
June 2014

Recombination locations and rates in beef cattle assessed from parent-offspring pairs.

Genet Sel Evol 2014 May 29;46:34. Epub 2014 May 29.

Department of Animal Science, Iowa State University, Ames, IA 50010, USA.

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http://dx.doi.org/10.1186/1297-9686-46-34DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4071795PMC
May 2014

Detection of selective sweeps in cattle using genome-wide SNP data.

BMC Genomics 2013 Jun 7;14:382. Epub 2013 Jun 7.

Division of Animal Sciences, University of Missouri, Columbia, MO 65211, USA.

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http://dx.doi.org/10.1186/1471-2164-14-382DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3681554PMC
June 2013

New World cattle show ancestry from multiple independent domestication events.

Proc Natl Acad Sci U S A 2013 Apr 25;110(15):E1398-406. Epub 2013 Mar 25.

Department of Integrative Biology, University of Texas at Austin, Austin, TX 78712, USA.

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http://dx.doi.org/10.1073/pnas.1303367110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3625352PMC
April 2013

Quantitative trait loci in a bacterially induced model of inflammatory bowel disease.

Mamm Genome 2011 Oct 30;22(9-10):544-55. Epub 2011 Jun 30.

Department of Veterinary Pathobiology, University of Missouri, Columbia, MO 65212, USA.

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http://dx.doi.org/10.1007/s00335-011-9343-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3804127PMC
October 2011

Evaluation of approaches for identifying population informative markers from high density SNP chips.

BMC Genet 2011 May 13;12:45. Epub 2011 May 13.

The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, Scotland, UK.

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http://dx.doi.org/10.1186/1471-2156-12-45DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3118130PMC
May 2011

Genetic variation at a metallothionein 2A promoter single-nucleotide polymorphism in white and black females in Midwestern United States.

J Toxicol Environ Health A 2010 ;73(19):1283-7

Family and Community Medicine Department, University of Missouri, Columbia, Missouri 65212, USA.

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http://dx.doi.org/10.1080/15287394.2010.485067DOI Listing
September 2010

GSEA-SNP identifies genes associated with Johne's disease in cattle.

Mamm Genome 2010 Aug 13;21(7-8):419-25. Epub 2010 Aug 13.

Department of Animal Sciences, Washington State University, Pullman, 99164-6353, USA.

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http://dx.doi.org/10.1007/s00335-010-9278-2DOI Listing
August 2010

Diversity and evolution of 11 innate immune genes in Bos taurus taurus and Bos taurus indicus cattle.

Proc Natl Acad Sci U S A 2010 Jan 14;107(1):151-6. Epub 2009 Dec 14.

Department of Veterinary Pathobiology, College of Veterinary Medicine, Texas A&M University, College Station, TX 77843-4467, USA.

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http://dx.doi.org/10.1073/pnas.0913006107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2806759PMC
January 2010

Deregressing estimated breeding values and weighting information for genomic regression analyses.

Genet Sel Evol 2009 Dec 31;41:55. Epub 2009 Dec 31.

Department of Animal Science, Iowa State University, Ames, IA 50011, USA.

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http://dx.doi.org/10.1186/1297-9686-41-55DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2817680PMC
December 2009

Assessment of DNA extracted from FTA cards for use on the Illumina iSelect BeadChip.

BMC Res Notes 2009 Jun 16;2:107. Epub 2009 Jun 16.

Division of Animal Sciences, University of Missouri-Columbia, Columbia, MO, USA.

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http://dx.doi.org/10.1186/1756-0500-2-107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2704227PMC
June 2009

The genome sequence of taurine cattle: a window to ruminant biology and evolution.

Authors:
Christine G Elsik Ross L Tellam Kim C Worley Richard A Gibbs Donna M Muzny George M Weinstock David L Adelson Evan E Eichler Laura Elnitski Roderic Guigó Debora L Hamernik Steve M Kappes Harris A Lewin David J Lynn Frank W Nicholas Alexandre Reymond Monique Rijnkels Loren C Skow Evgeny M Zdobnov Lawrence Schook James Womack Tyler Alioto Stylianos E Antonarakis Alex Astashyn Charles E Chapple Hsiu-Chuan Chen Jacqueline Chrast Francisco Câmara Olga Ermolaeva Charlotte N Henrichsen Wratko Hlavina Yuri Kapustin Boris Kiryutin Paul Kitts Felix Kokocinski Melissa Landrum Donna Maglott Kim Pruitt Victor Sapojnikov Stephen M Searle Victor Solovyev Alexandre Souvorov Catherine Ucla Carine Wyss Juan M Anzola Daniel Gerlach Eran Elhaik Dan Graur Justin T Reese Robert C Edgar John C McEwan Gemma M Payne Joy M Raison Thomas Junier Evgenia V Kriventseva Eduardo Eyras Mireya Plass Ravikiran Donthu Denis M Larkin James Reecy Mary Q Yang Lin Chen Ze Cheng Carol G Chitko-McKown George E Liu Lakshmi K Matukumalli Jiuzhou Song Bin Zhu Daniel G Bradley Fiona S L Brinkman Lilian P L Lau Matthew D Whiteside Angela Walker Thomas T Wheeler Theresa Casey J Bruce German Danielle G Lemay Nauman J Maqbool Adrian J Molenaar Seongwon Seo Paul Stothard Cynthia L Baldwin Rebecca Baxter Candice L Brinkmeyer-Langford Wendy C Brown Christopher P Childers Timothy Connelley Shirley A Ellis Krista Fritz Elizabeth J Glass Carolyn T A Herzig Antti Iivanainen Kevin K Lahmers Anna K Bennett C Michael Dickens James G R Gilbert Darren E Hagen Hanni Salih Jan Aerts Alexandre R Caetano Brian Dalrymple Jose Fernando Garcia Clare A Gill Stefan G Hiendleder Erdogan Memili Diane Spurlock John L Williams Lee Alexander Michael J Brownstein Leluo Guan Robert A Holt Steven J M Jones Marco A Marra Richard Moore Stephen S Moore Andy Roberts Masaaki Taniguchi Richard C Waterman Joseph Chacko Mimi M Chandrabose Andy Cree Marvin Diep Dao Huyen H Dinh Ramatu Ayiesha Gabisi Sandra Hines Jennifer Hume Shalini N Jhangiani Vandita Joshi Christie L Kovar Lora R Lewis Yih-Shin Liu John Lopez Margaret B Morgan Ngoc Bich Nguyen Geoffrey O Okwuonu San Juana Ruiz Jireh Santibanez Rita A Wright Christian Buhay Yan Ding Shannon Dugan-Rocha Judith Herdandez Michael Holder Aniko Sabo Amy Egan Jason Goodell Katarzyna Wilczek-Boney Gerald R Fowler Matthew Edward Hitchens Ryan J Lozado Charles Moen David Steffen James T Warren Jingkun Zhang Readman Chiu Jacqueline E Schein K James Durbin Paul Havlak Huaiyang Jiang Yue Liu Xiang Qin Yanru Ren Yufeng Shen Henry Song Stephanie Nicole Bell Clay Davis Angela Jolivet Johnson Sandra Lee Lynne V Nazareth Bella Mayurkumar Patel Ling-Ling Pu Selina Vattathil Rex Lee Williams Stacey Curry Cerissa Hamilton Erica Sodergren David A Wheeler Wes Barris Gary L Bennett André Eggen Ronnie D Green Gregory P Harhay Matthew Hobbs Oliver Jann John W Keele Matthew P Kent Sigbjørn Lien Stephanie D McKay Sean McWilliam Abhirami Ratnakumar Robert D Schnabel Timothy Smith Warren M Snelling Tad S Sonstegard Roger T Stone Yoshikazu Sugimoto Akiko Takasuga Jeremy F Taylor Curtis P Van Tassell Michael D Macneil Antonio R R Abatepaulo Colette A Abbey Virpi Ahola Iassudara G Almeida Ariel F Amadio Elen Anatriello Suria M Bahadue Fernando H Biase Clayton R Boldt Jeffery A Carroll Wanessa A Carvalho Eliane P Cervelatti Elsa Chacko Jennifer E Chapin Ye Cheng Jungwoo Choi Adam J Colley Tatiana A de Campos Marcos De Donato Isabel K F de Miranda Santos Carlo J F de Oliveira Heather Deobald Eve Devinoy Kaitlin E Donohue Peter Dovc Annett Eberlein Carolyn J Fitzsimmons Alessandra M Franzin Gustavo R Garcia Sem Genini Cody J Gladney Jason R Grant Marion L Greaser Jonathan A Green Darryl L Hadsell Hatam A Hakimov Rob Halgren Jennifer L Harrow Elizabeth A Hart Nicola Hastings Marta Hernandez Zhi-Liang Hu Aaron Ingham Terhi Iso-Touru Catherine Jamis Kirsty Jensen Dimos Kapetis Tovah Kerr Sari S Khalil Hasan Khatib Davood Kolbehdari Charu G Kumar Dinesh Kumar Richard Leach Justin C-M Lee Changxi Li Krystin M Logan Roberto Malinverni Elisa Marques William F Martin Natalia F Martins Sandra R Maruyama Raffaele Mazza Kim L McLean Juan F Medrano Barbara T Moreno Daniela D Moré Carl T Muntean Hari P Nandakumar Marcelo F G Nogueira Ingrid Olsaker Sameer D Pant Francesca Panzitta Rosemeire C P Pastor Mario A Poli Nathan Poslusny Satyanarayana Rachagani Shoba Ranganathan Andrej Razpet Penny K Riggs Gonzalo Rincon Nelida Rodriguez-Osorio Sandra L Rodriguez-Zas Natasha E Romero Anne Rosenwald Lillian Sando Sheila M Schmutz Libing Shen Laura Sherman Bruce R Southey Ylva Strandberg Lutzow Jonathan V Sweedler Imke Tammen Bhanu Prakash V L Telugu Jennifer M Urbanski Yuri T Utsunomiya Chris P Verschoor Ashley J Waardenberg Zhiquan Wang Robert Ward Rosemarie Weikard Thomas H Welsh Stephen N White Laurens G Wilming Kris R Wunderlich Jianqi Yang Feng-Qi Zhao

Science 2009 Apr;324(5926):522-8

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http://dx.doi.org/10.1126/science.1169588DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2943200PMC
April 2009

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.

Science 2009 Apr;324(5926):528-32

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http://dx.doi.org/10.1126/science.1167936DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735092PMC
April 2009

High density linkage disequilibrium maps of chromosome 14 in Holstein and Angus cattle.

BMC Genet 2008 Jul 8;9:45. Epub 2008 Jul 8.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2P5, Canada.

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http://dx.doi.org/10.1186/1471-2156-9-45DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2478670PMC
July 2008

Role of genetic background in determining phenotypic severity throughout postnatal development and at peak bone mass in Col1a2 deficient mice (oim).

Bone 2008 Apr 5;42(4):681-94. Epub 2008 Jan 5.

Genetics Area Program, University of Missouri-Columbia, Columbia, Missouri, 65211, USA; Department of Biochemistry, University of Missouri-Columbia, Columbia, Missouri, 65211, USA.

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http://dx.doi.org/10.1016/j.bone.2007.12.215DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2423326PMC
April 2008

SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries.

Nat Methods 2008 Mar 24;5(3):247-52. Epub 2008 Feb 24.

Bovine Functional Genomics Laboratory, United States Department of Agriculture, Agricultural Research Service, 10300 Baltimore Avenue, Beltsville, Maryland 20705, USA.

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http://www.nature.com/articles/nmeth.1185
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http://dx.doi.org/10.1038/nmeth.1185DOI Listing
March 2008

A neonatal encephalopathy with seizures in standard poodle dogs with a missense mutation in the canine ortholog of ATF2.

Neurogenetics 2008 Feb 12;9(1):41-9. Epub 2007 Dec 12.

Department of Veterinary Pathobiology, University of Missouri, 322 Connaway Hall, Columbia, MO, 65211, USA,

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http://dx.doi.org/10.1007/s10048-007-0112-2DOI Listing
February 2008

Genetic mapping of canine multiple system degeneration and ectodermal dysplasia loci.

J Hered 2005 15;96(7):727-34. Epub 2005 Jun 15.

Department of Veterinary Medicine and Surgery, University of Missouri, Columbia, MO 65211, USA.

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http://dx.doi.org/10.1093/jhered/esi086DOI Listing
October 2006

Impaired collagen chaperone results in preterm PROM.

Proc Natl Acad Sci U S A 2006 Sep 28;103(36):13267-8. Epub 2006 Aug 28.

Department of Pathology and Anatomical Sciences and Division of Animal Sciences, University of Missouri, Columbia, MO 65211, USA.

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http://dx.doi.org/10.1073/pnas.0606017103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1569151PMC
September 2006

Identification of genetic variation and putative regulatory regions in bovine CARD15.

Mamm Genome 2006 Aug 4;17(8):892-901. Epub 2006 Aug 4.

Department of Veterinary Pathobiology, Texas A&M University, College Station, Texas 77843-4467, USA.

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http://dx.doi.org/10.1007/s00335-005-0148-2DOI Listing
August 2006

A mutation in the cathepsin D gene (CTSD) in American Bulldogs with neuronal ceroid lipofuscinosis.

Mol Genet Metab 2006 Apr 4;87(4):341-8. Epub 2006 Jan 4.

Department of Veterinary Pathobiology, University of Missouri College of Veterinary Medicine, Columbia, USA.

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http://dx.doi.org/10.1016/j.ymgme.2005.11.005DOI Listing
April 2006

Conservation genomics: disequilibrium mapping of domestic cattle chromosomal segments in North American bison populations.

Mol Ecol 2005 Jul;14(8):2343-62

Department of Veterinary Pathobiology, College of Veterinary Medicine and Biochemical Sciences, Texas A&M University, College Station, TX 77843, USA.

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http://doi.wiley.com/10.1111/j.1365-294x.2005.02591.x
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http://dx.doi.org/10.1111/j.1365-294x.2005.02591.xDOI Listing
July 2005

Fine-mapping milk production quantitative trait loci on BTA6: analysis of the bovine osteopontin gene.

Proc Natl Acad Sci U S A 2005 May 2;102(19):6896-901. Epub 2005 May 2.

Division of Animal Sciences, University of Missouri, Columbia, MO 65211, USA.

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http://dx.doi.org/10.1073/pnas.0502398102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1100795PMC
May 2005

Application of non-parametric bootstrap methods to estimate confidence intervals for QTL location in a beef cattle QTL experimental population.

Genet Res 2002 Jun;79(3):259-63

Animal Science Department, Texas A&M University, College Station 78743, USA.

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http://dx.doi.org/10.1017/s001667230200561xDOI Listing
June 2002