Publications by authors named "Jennifer M Taylor"

86Publications

Education Time Out and Debrief: Structured Implementation of Perioperative Resident Technical Education Discussion.

J Am Coll Surg 2020 Oct 3. Epub 2020 Oct 3.

Scott Department of Urology, Baylor College of Medicine, Houston, TX. Electronic address:

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http://dx.doi.org/10.1016/j.jamcollsurg.2020.08.769DOI Listing
October 2020

Robot-assisted Radical Cystectomy Versus Open Radical Cystectomy: A Meta-analysis of Oncologic, Perioperative, and Complication-related outcomes.

Eur Urol Oncol 2019 07 16;2(4):443-447. Epub 2018 Nov 16.

Division of Urology, Department of Surgery, University of Toronto, Toronto, Canada.

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http://dx.doi.org/10.1016/j.euo.2018.10.008DOI Listing
July 2019

Urologic oncology workforce diversity: A first step in reducing cancer disparities.

Urol Oncol 2019 May 16. Epub 2019 May 16.

Department of Urology, Baylor College of Medicine, Houston, TX.

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http://dx.doi.org/10.1016/j.urolonc.2019.04.025DOI Listing
May 2019

Asexual Female Gametogenesis Involves Contact with a Sexually-Fated Megaspore in Apomictic .

Plant Physiol 2018 07 29;177(3):1027-1049. Epub 2018 May 29.

Commonwealth Scientific and Industrial Research Organisation Agriculture and Food, Urrbrae, South Australia 5064, Australia

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http://dx.doi.org/10.1104/pp.18.00342DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6052994PMC
July 2018

Editorial Comment.

J Urol 2018 09 22;200(3):547-548. Epub 2018 May 22.

Department of Urology, Baylor College of Medicine and Michael E. DeBakey Veterans Affairs Medical Center, Houston, Texas.

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http://dx.doi.org/10.1016/j.juro.2018.03.154DOI Listing
September 2018

Rare Metastatic Testicular Cancer in a Veteran.

Curr Urol 2018 Feb 30;11(2):110-112. Epub 2017 Dec 30.

Department of Michael E. DeBakey VA Medical Center & Baylor College of Medicine, Houston, TX, USA.

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http://dx.doi.org/10.1159/000447203DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5836199PMC
February 2018

Improved prediction of fungal effector proteins from secretomes with EffectorP 2.0.

Mol Plant Pathol 2018 09 11;19(9):2094-2110. Epub 2018 May 11.

Black Mountain Laboratories, CSIRO Agriculture and Food, Canberra, ACT 2601, Australia.

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http://dx.doi.org/10.1111/mpp.12682DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6638006PMC
September 2018

ApoplastP: prediction of effectors and plant proteins in the apoplast using machine learning.

New Phytol 2018 03 15;217(4):1764-1778. Epub 2017 Dec 15.

Black Mountain Laboratories, CSIRO Agriculture and Food, Canberra, ACT, 2601, Australia.

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http://dx.doi.org/10.1111/nph.14946DOI Listing
March 2018

Computational Methods for Predicting Effectors in Rust Pathogens.

Methods Mol Biol 2017 ;1659:73-83

INRA, Unité Mixte de Recherche INRA/Université de Lorraine 1136 Interactions Arbres-Microorganismes, INRA Centre Grand Est - Nancy, Champenoux, France.

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http://dx.doi.org/10.1007/978-1-4939-7249-4_7DOI Listing
May 2018

Carbon Nano-Structured Neural Probes Show Promise for Magnetic Resonance Imaging Applications.

Biomed Phys Eng Express 2017 27;4(1). Epub 2017 Nov 27.

Department of Mechanical Engineering, University of Minnesota, 111 Church St. SE, Minneapolis, MN.

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http://dx.doi.org/10.1088/2057-1976/aa948dDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5880054PMC
November 2017

Patterns of gene expression in developing embryos of Arabidopsis hybrids.

Plant J 2017 Mar 10;89(5):927-939. Epub 2017 Feb 10.

Commonwealth Scientific and Industrial Research Organisation, Agriculture and Food, Canberra, ACT, 2601, Australia.

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http://dx.doi.org/10.1111/tpj.13432DOI Listing
March 2017

The case for salvage cystectomy after pelvic radiation.

Minerva Urol Nefrol 2016 Apr 16;68(2):161-71. Epub 2016 Mar 16.

Scott Department of Urology, Baylor College of Medicine, Houston, TX, USA -

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April 2016

Evaluation of Secretion Prediction Highlights Differing Approaches Needed for Oomycete and Fungal Effectors.

Front Plant Sci 2015 23;6:1168. Epub 2015 Dec 23.

CSIRO Agriculture, Black Mountain Laboratories Canberra, ACT, Australia.

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http://dx.doi.org/10.3389/fpls.2015.01168DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4688413PMC
January 2016

EffectorP: predicting fungal effector proteins from secretomes using machine learning.

New Phytol 2016 Apr 17;210(2):743-61. Epub 2015 Dec 17.

Black Mountain Laboratories, CSIRO Agriculture, Canberra, 2601, ACT, Australia.

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http://dx.doi.org/10.1111/nph.13794DOI Listing
April 2016

Deep Sequencing of the Fruit Transcriptome and Lipid Accumulation in a Non-Seed Tissue of Chinese Tallow, a Potential Biofuel Crop.

Plant Cell Physiol 2016 Jan 19;57(1):125-37. Epub 2015 Nov 19.

CSIRO Food and Nutrition, Canberra, ACT, Australia, 2601 CSIRO Agriculture, Canberra, ACT, Australia, 2601.

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http://dx.doi.org/10.1093/pcp/pcv181DOI Listing
January 2016

Dynamic correlations between hemodynamic, metabolic, and neuronal responses to acute whole-brain ischemia.

NMR Biomed 2015 Nov 16;28(11):1357-65. Epub 2015 Sep 16.

Center for Magnetic Resonance Research, Department of Radiology, University of Minnesota, Twin Cities, MN, USA.

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http://dx.doi.org/10.1002/nbm.3408DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4643857PMC
November 2015

Advances and challenges in computational prediction of effectors from plant pathogenic fungi.

PLoS Pathog 2015 May 28;11(5):e1004806. Epub 2015 May 28.

CSIRO Agriculture Flagship, Black Mountain Laboratories, Canberra, Australian Capital Territory, Australia.

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http://dx.doi.org/10.1371/journal.ppat.1004806DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4447458PMC
May 2015

Genome-Wide Analysis in Three Fusarium Pathogens Identifies Rapidly Evolving Chromosomes and Genes Associated with Pathogenicity.

Genome Biol Evol 2015 May 19;7(6):1613-27. Epub 2015 May 19.

CSIRO Agriculture Flagship, Black Mountain Laboratories, Canberra, Australian Capital Territory, Australia.

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http://dx.doi.org/10.1093/gbe/evv092DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4494044PMC
May 2015

A reference genetic linkage map of apomictic Hieracium species based on expressed markers derived from developing ovule transcripts.

Ann Bot 2015 Mar 22;115(4):567-80. Epub 2014 Dec 22.

Kazusa DNA Research Institute, 2-6-7 Kazusa-Kamatari, Kisarazu, Chiba 292-0818, Japan and Commonwealth Scientific and Industrial Research Organization (CSIRO), Agriculture Flagship, Waite Campus, Hartley Grove, Urrbrae, South Australia 5064, Australia

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http://aob.oxfordjournals.org/content/early/2014/12/20/aob.m
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http://aob.oxfordjournals.org/cgi/doi/10.1093/aob/mcu249
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http://dx.doi.org/10.1093/aob/mcu249DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4343286PMC
March 2015

Diversifying selection in the wheat stem rust fungus acts predominantly on pathogen-associated gene families and reveals candidate effectors.

Front Plant Sci 2014 1;5:372. Epub 2014 Sep 1.

Plant Industry, Black Mountain Laboratories, Commonwealth Scientific and Industrial Research Organisation Canberra, ACT, Australia.

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http://dx.doi.org/10.3389/fpls.2014.00372DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4150398PMC
September 2014

Autonomic dysfunction is a major feature of cerebellar ataxia, neuropathy, vestibular areflexia 'CANVAS' syndrome.

Brain 2014 Oct 28;137(Pt 10):2649-56. Epub 2014 Jul 28.

1 Department of Neurology, Auckland City Hospital, 2 Park Road, Auckland 1023, New Zealand 3 Centre for Brain Research, University of Auckland, 85 Park Road, Auckland 1142, New Zealand

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http://dx.doi.org/10.1093/brain/awu196DOI Listing
October 2014

Identification of candidate genes for Fusarium yellows resistance in Chinese cabbage by differential expression analysis.

Plant Mol Biol 2014 Jun 26;85(3):247-57. Epub 2014 Mar 26.

Graduate School of Science and Technology, Niigata University, Ikarashi-ninocho, Niigata, 950-2181, Japan,

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http://dx.doi.org/10.1007/s11103-014-0182-0DOI Listing
June 2014

Clinical outcome of patients with T1 micropapillary urothelial carcinoma of the bladder.

J Urol 2014 Sep 3;192(3):702-7. Epub 2014 Mar 3.

Urology Service, Department of Surgery, Sidney Kimmel Center for Prostate and Urologic Cancers, Memorial Sloan-Kettering Cancer Center, New York, New York.

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http://dx.doi.org/10.1016/j.juro.2014.02.2565DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4465582PMC
September 2014

Aminopeptidase activities as prospective urinary biomarkers for bladder cancer.

Proteomics Clin Appl 2014 Jun 31;8(5-6):317-26. Epub 2014 Mar 31.

Protein Center, Memorial Sloan-Kettering Cancer Center, New York, NY, USA; Department of Surgery, Urology Service, Memorial Sloan-Kettering Cancer Center, New York, NY, USA; Department of Urology, University of Pittsburgh Medical Center, Pittsburgh, PA, USA.

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http://dx.doi.org/10.1002/prca.201300118DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4059539PMC
June 2014

A novel splicing outcome reveals more than 2000 new mammalian protein isoforms.

Bioinformatics 2014 Jan 20;30(2):151-6. Epub 2013 Nov 20.

Research School of Biology, Australian National University, Canberra, ACT 0200 and CSIRO Plant Industry, Black Mountain Laboratories, Canberra, ACT 2601, Australia.

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http://dx.doi.org/10.1093/bioinformatics/btt668DOI Listing
January 2014

A comparative hidden Markov model analysis pipeline identifies proteins characteristic of cereal-infecting fungi.

BMC Genomics 2013 Nov 20;14:807. Epub 2013 Nov 20.

Commonwealth Scientific and Industrial Research Organization (CSIRO) Plant Industry, Centre for Environment and Life Sciences, Perth, Western Australia, Australia.

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http://dx.doi.org/10.1186/1471-2164-14-807DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3914424PMC
November 2013

Enlarging cells initiating apomixis in Hieracium praealtum transition to an embryo sac program prior to entering mitosis.

Plant Physiol 2013 Sep 17;163(1):216-31. Epub 2013 Jul 17.

Commonwealth Scientific and Industrial Research Organization Plant Industry, Waite Campus, Adelaide, South Australia 5064, Australia.

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http://dx.doi.org/10.1104/pp.113.219485DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3762643PMC
September 2013

Roles for blue light, jasmonate and nitric oxide in the regulation of dormancy and germination in wheat grain (Triticum aestivum L.).

Planta 2013 Jul 16;238(1):121-38. Epub 2013 Apr 16.

CSIRO Division of Plant Industry, GPO Box 1600, Canberra, ACT 2601, Australia.

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http://dx.doi.org/10.1007/s00425-013-1878-0DOI Listing
July 2013

Antibody responses to natural rattlesnake envenomation and a rattlesnake toxoid vaccine in horses.

Clin Vaccine Immunol 2013 May 20;20(5):732-7. Epub 2013 Mar 20.

Department of Veterinary Clinical Sciences, Center for Veterinary Health Sciences, Oklahoma State University, Stillwater, Oklahoma, USA.

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http://dx.doi.org/10.1128/CVI.00004-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3647753PMC
May 2013

Pathological response to neoadjuvant chemotherapy for muscle-invasive micropapillary bladder cancer.

BJU Int 2013 Jun 5;111(8):E325-30. Epub 2013 Feb 5.

Department of Surgery, Urology Service, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.

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http://dx.doi.org/10.1111/j.1464-410X.2012.11751.xDOI Listing
June 2013

A comparison of transcriptome and epigenetic status between closely related species in the genus Arabidopsis.

Gene 2012 Sep 13;506(2):301-9. Epub 2012 Jul 13.

Watanabe seed Co., Ltd, Machiyashiki, Misato-cho, Miyagi 987-8607, Japan.

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http://dx.doi.org/10.1016/j.gene.2012.07.003DOI Listing
September 2012

Heterosis of Arabidopsis hybrids between C24 and Col is associated with increased photosynthesis capacity.

Proc Natl Acad Sci U S A 2012 May 9;109(18):7109-14. Epub 2012 Apr 9.

Plant Industry, Commonwealth Scientific and Industrial Research Organisation, Canberra, ACT 2600, Australia.

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http://dx.doi.org/10.1073/pnas.1204464109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3344962PMC
May 2012

Somatic small RNA pathways promote the mitotic events of megagametogenesis during female reproductive development in Arabidopsis.

Development 2012 Apr 7;139(8):1399-404. Epub 2012 Mar 7.

CSIRO Plant Industry, Waite Campus, Hartley Grove, Urrbrae, SA 5064, Australia.

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http://dx.doi.org/10.1242/dev.075390DOI Listing
April 2012

Trans chromosomal methylation in Arabidopsis hybrids.

Proc Natl Acad Sci U S A 2012 Feb 13;109(9):3570-5. Epub 2012 Feb 13.

Commonwealth Scientific and Industrial Research Organization Plant Industry, Canberra, ACT 2600, Australia.

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http://dx.doi.org/10.1073/pnas.1201043109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3295253PMC
February 2012

Combination of a novel gene expression signature with a clinical nomogram improves the prediction of survival in high-risk bladder cancer.

Clin Cancer Res 2012 Mar 6;18(5):1323-33. Epub 2012 Jan 6.

Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Harvard School of Public Health, Boston, Massachusetts 02215, USA.

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http://dx.doi.org/10.1158/1078-0432.CCR-11-2271DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3569085PMC
March 2012

Genome wide gene expression in artificially synthesized amphidiploids of Arabidopsis.

Plant Mol Biol 2011 Nov 1;77(4-5):419-31. Epub 2011 Sep 1.

CSIRO Plant Industry, Canberra, ACT 2601, Australia.

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http://dx.doi.org/10.1007/s11103-011-9820-yDOI Listing
November 2011

Evaluating the utility of a preoperative nomogram for predicting 90-day mortality following radical cystectomy for bladder cancer.

BJU Int 2012 Mar 1;109(6):855-9. Epub 2011 Jul 1.

Department of Urology and Epidemiology and Biostatistics, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.

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http://dx.doi.org/10.1111/j.1464-410X.2011.10391.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3193901PMC
March 2012

FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis.

Proc Natl Acad Sci U S A 2011 Apr 4;108(16):6680-5. Epub 2011 Apr 4.

Commonwealth Scientific and Industrial Research Organisation Plant Industry, Canberra ACT 2600, Australia.

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http://dx.doi.org/10.1073/pnas.1103175108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3081018PMC
April 2011

Epigenetic variation in the FWA gene within the genus Arabidopsis.

Plant J 2011 Jun 4;66(5):831-43. Epub 2011 Apr 4.

CSIRO Plant Industry, Canberra, ACT 2601, Australia.

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http://doi.wiley.com/10.1111/j.1365-313X.2011.04549.x
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http://dx.doi.org/10.1111/j.1365-313X.2011.04549.xDOI Listing
June 2011

Maximizing cure for muscle-invasive bladder cancer: integration of surgery and chemotherapy.

Eur Urol 2011 Jun 18;59(6):978-84. Epub 2011 Jan 18.

Department of Urology, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S03022838110002
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http://dx.doi.org/10.1016/j.eururo.2011.01.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3137649PMC
June 2011

Management of urethral recurrence after orthotopic urinary diversion.

BJU Int 2010 Jul 11;106(1):56-61. Epub 2009 Dec 11.

Department of Urology and Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.

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http://dx.doi.org/10.1111/j.1464-410X.2009.09095.xDOI Listing
July 2010

Copper chelator ATN-224 inhibits endothelial function by multiple mechanisms.

Microvasc Res 2009 May 27;77(3):314-26. Epub 2009 Jan 27.

Cancer Research UK Department of Medical Oncology, Weatherall Institute of Molecular Medicine, Oxford OX3 9DS, UK.

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http://dx.doi.org/10.1016/j.mvr.2009.01.003DOI Listing
May 2009

Chromatin profiling across the human tumour necrosis factor gene locus reveals a complex, cell type-specific landscape with novel regulatory elements.

Nucleic Acids Res 2008 Sep 24;36(15):4845-62. Epub 2008 Jul 24.

Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK.

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http://dx.doi.org/10.1093/nar/gkn444DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2528168PMC
September 2008

Functional classification analysis of somatically mutated genes in human breast and colorectal cancers.

Genomics 2008 Jun 22;91(6):508-11. Epub 2008 Apr 22.

Department of Biostatistics and Computational Biology and Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02115-6084, USA.

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http://dx.doi.org/10.1016/j.ygeno.2008.03.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2492759PMC
June 2008

Common approach to managing lower urinary tract symptoms and erectile dysfunction.

Asian J Androl 2008 Jan;10(1):45-53

Department of Urology, University of Texas Medical School at Houston, Houston, TX 77030, USA.

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http://dx.doi.org/10.1111/j.1745-7262.2008.00355.xDOI Listing
January 2008

Regulation of multiple angiogenic pathways by Dll4 and Notch in human umbilical vein endothelial cells.

Microvasc Res 2008 Mar 29;75(2):144-54. Epub 2007 Jun 29.

Cancer Research UK, Molecular Oncology Laboratories, Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, University of Oxford, Oxford, OX3 9DS, UK.

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http://dx.doi.org/10.1016/j.mvr.2007.06.006DOI Listing
March 2008

Possible correlates of long-term protection against Helicobacter pylori following systemic or combinations of mucosal and systemic immunizations.

Infect Immun 2007 Jul 14;75(7):3462-9. Epub 2007 May 14.

Departments of Internal Medicine and Medical Microbiology and Immunology, Center for Comparative Medicine, University of California-Davis, Davis, CA 95616, USA.

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http://iai.asm.org/cgi/doi/10.1128/IAI.01470-06
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http://dx.doi.org/10.1128/IAI.01470-06DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1932914PMC
July 2007

Suburethral sling at the time of radical prostatectomy in patients at high risk of postoperative incontinence.

BJU Int 2006 Aug;98(2):308-13

Department of Urology, The University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030, USA.

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http://dx.doi.org/10.1111/j.1464-410X.2006.06220.xDOI Listing
August 2006

Helicobacter pylori lipopolysaccharide promotes a Th1 type immune response in immunized mice.

Vaccine 2006 Jun 30;24(23):4987-94. Epub 2006 Mar 30.

Department of Internal Medicine, Center for Comparative Medicine, University of California, Davis, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S0264410X0600349
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http://dx.doi.org/10.1016/j.vaccine.2006.03.043DOI Listing
June 2006

Genetic expression profile of olfactory ensheathing cells is distinct from that of Schwann cells and astrocytes.

Glia 2005 Aug;51(2):132-47

NeuroRepair Group, School of Medicine, University of Tasmania, Hobart, Tasmania, Australia.

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http://dx.doi.org/10.1002/glia.20195DOI Listing
August 2005

The impact of microsatellite instability on the molecular phenotype of colorectal tumors.

Cancer Res 2003 Aug;63(15):4577-82

Department of Medicine, Division of Gastroenterology, University of Maryland School of Medicine, 655 West Baltimore Street, Baltimore, MD 21201, USA.

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August 2003

Apoptosis of gastric lymphocytes in Helicobacter pylori-infected rhesus macaques.

Dig Dis Sci 2003 Jun;48(6):1073-80

Department of Medical Microbiology and Immunology, University of California, Davis, California 95616, USA.

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http://dx.doi.org/10.1023/a:1023756427046DOI Listing
June 2003